diff options
Diffstat (limited to 'sci-biology/bioperl-run')
-rw-r--r-- | sci-biology/bioperl-run/Manifest | 2 | ||||
-rw-r--r-- | sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild | 33 | ||||
-rw-r--r-- | sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild | 41 |
3 files changed, 34 insertions, 42 deletions
diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest index 636cac1d11c0..6ff8fd52a6b7 100644 --- a/sci-biology/bioperl-run/Manifest +++ b/sci-biology/bioperl-run/Manifest @@ -1,3 +1,3 @@ DIST BioPerl-Run-1.006900.tar.gz 14546677 BLAKE2B 9faf58796b9874b19b66e74abc51ed1d1b6e2928bcf9904506b2af6b2b7c1772a90eab24bf0e7c050fd4a2b120ba506ad5edb8a693496b7468fe7c8d05d11f0a SHA512 47f2b853885c604291ac0aba3269b897de59cf7da6f7d54a50ff950cca836338091309df550f32695159c620be23391306d0421d2bbc22eebbb61a9e280ad83c -EBUILD bioperl-run-1.6.9.ebuild 927 BLAKE2B 035f172e5ee9d617bb5eb0b522d17f07624be54773c58b21b5435835ebc3cde67028ef7cc3254cec5f257b67256d10bd19c2f1d390b26e73cc877971320b3116 SHA512 798dfb678a67013499b317281bbe8b0f6012fa2daabb5f77223e1839f1dc2b926c866e39164de745855577adea46f972a25726b8fcc8bcfe969c44634c38455b +EBUILD bioperl-run-1.6.9-r1.ebuild 650 BLAKE2B a214f71456de9391214b0a7f34dadf26613c9879e395062b5e48af26692a3d252c07527cd05ced889a6b9a03ba06d61b19362d936e9d984753b898bdc6bdbd70 SHA512 be72eba0015551c616680ecc1f623d3818f48a6bef98532c90f2abca325952c16dd9be8ded66bc9e5ff89c70345d343cb9f7e40c7594995ab286ad5e2b3eb64d MISC metadata.xml 346 BLAKE2B 95f61e91a850b29694d458a88cca4d4594bc307c3ff2f3987b8da6d0d1344cb00f9c8d0c2657b35adc167887cc75340808a3637f571bdf4de12d52f92b87bae3 SHA512 2ffa2072f142a304c63e4b2403eaf1f65fcf61aee9798c08c896ccab9569fa90926c83652589190a2ba60170fff20ccc106e0b8397fe7e8d3519cce4064ed000 diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild new file mode 100644 index 000000000000..2541aab82506 --- /dev/null +++ b/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +BIOPERL_RELEASE=1.6.9 + +DIST_AUTHOR=CJFIELDS +DIST_NAME=BioPerl-Run +DIST_VERSION=1.006900 +inherit perl-module + +DESCRIPTION="Perl wrapper modules for key bioinformatics applications" +HOMEPAGE="http://www.bioperl.org/" + +SLOT="0" +KEYWORDS="amd64 x86" +IUSE="minimal test" +RESTRICT="test" + +RDEPEND=" + >=sci-biology/bioperl-${BIOPERL_RELEASE} + !minimal? ( + dev-perl/Algorithm-Diff + dev-perl/XML-Twig + dev-perl/IO-String + dev-perl/IPC-Run + dev-perl/File-Sort + )" +DEPEND="${RDEPEND}" +BDEPEND="dev-perl/Module-Build" + +mydoc="AUTHORS BUGS FAQ" diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild deleted file mode 100644 index 461c4f51b071..000000000000 --- a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild +++ /dev/null @@ -1,41 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI="5" - -BIOPERL_RELEASE=1.6.9 - -MY_PN=BioPerl-Run -MODULE_AUTHOR=CJFIELDS -MODULE_VERSION=1.006900 -inherit perl-module - -DESCRIPTION="Perl wrapper modules for key bioinformatics applications" -HOMEPAGE="http://www.bioperl.org/" - -SLOT="0" -KEYWORDS="amd64 x86" -IUSE="minimal test" -#SRC_TEST="do" - -RESTRICT="test" - -CDEPEND=">=sci-biology/bioperl-${BIOPERL_RELEASE} - !minimal? ( - dev-perl/Algorithm-Diff - dev-perl/XML-Twig - dev-perl/IO-String - dev-perl/IPC-Run - dev-perl/File-Sort - )" -DEPEND="dev-perl/Module-Build - ${CDEPEND}" -RDEPEND="${CDEPEND}" - -src_install() { - mydoc="AUTHORS BUGS FAQ" - perl-module_src_install - # TODO: File collision in Bio/ConfigData.pm (a Module::Build internal file) - # with sci-biology/bioperl. Workaround: the "nuke it from orbit" solution :D - #find "${D}" -name '*ConfigData*' -print -delete -} |