gentoo resync : 20.03.2022

3 files changed, 34 insertions, 42 deletions

diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest
index 636cac1d11c0..6ff8fd52a6b7 100644
--- a/sci-biology/bioperl-run/Manifest
+++ b/sci-biology/bioperl-run/Manifest
@@ -1,3 +1,3 @@
 DIST BioPerl-Run-1.006900.tar.gz 14546677 BLAKE2B 9faf58796b9874b19b66e74abc51ed1d1b6e2928bcf9904506b2af6b2b7c1772a90eab24bf0e7c050fd4a2b120ba506ad5edb8a693496b7468fe7c8d05d11f0a SHA512 47f2b853885c604291ac0aba3269b897de59cf7da6f7d54a50ff950cca836338091309df550f32695159c620be23391306d0421d2bbc22eebbb61a9e280ad83c
-EBUILD bioperl-run-1.6.9.ebuild 927 BLAKE2B 035f172e5ee9d617bb5eb0b522d17f07624be54773c58b21b5435835ebc3cde67028ef7cc3254cec5f257b67256d10bd19c2f1d390b26e73cc877971320b3116 SHA512 798dfb678a67013499b317281bbe8b0f6012fa2daabb5f77223e1839f1dc2b926c866e39164de745855577adea46f972a25726b8fcc8bcfe969c44634c38455b
+EBUILD bioperl-run-1.6.9-r1.ebuild 650 BLAKE2B a214f71456de9391214b0a7f34dadf26613c9879e395062b5e48af26692a3d252c07527cd05ced889a6b9a03ba06d61b19362d936e9d984753b898bdc6bdbd70 SHA512 be72eba0015551c616680ecc1f623d3818f48a6bef98532c90f2abca325952c16dd9be8ded66bc9e5ff89c70345d343cb9f7e40c7594995ab286ad5e2b3eb64d
 MISC metadata.xml 346 BLAKE2B 95f61e91a850b29694d458a88cca4d4594bc307c3ff2f3987b8da6d0d1344cb00f9c8d0c2657b35adc167887cc75340808a3637f571bdf4de12d52f92b87bae3 SHA512 2ffa2072f142a304c63e4b2403eaf1f65fcf61aee9798c08c896ccab9569fa90926c83652589190a2ba60170fff20ccc106e0b8397fe7e8d3519cce4064ed000
diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild
new file mode 100644
index 000000000000..2541aab82506
--- /dev/null
+++ b/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild
@@ -0,0 +1,33 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+BIOPERL_RELEASE=1.6.9
+
+DIST_AUTHOR=CJFIELDS
+DIST_NAME=BioPerl-Run
+DIST_VERSION=1.006900
+inherit perl-module
+
+DESCRIPTION="Perl wrapper modules for key bioinformatics applications"
+HOMEPAGE="http://www.bioperl.org/"
+
+SLOT="0"
+KEYWORDS="amd64 x86"
+IUSE="minimal test"
+RESTRICT="test"
+
+RDEPEND="
+	>=sci-biology/bioperl-${BIOPERL_RELEASE}
+	!minimal? (
+		dev-perl/Algorithm-Diff
+		dev-perl/XML-Twig
+		dev-perl/IO-String
+		dev-perl/IPC-Run
+		dev-perl/File-Sort
+	)"
+DEPEND="${RDEPEND}"
+BDEPEND="dev-perl/Module-Build"
+
+mydoc="AUTHORS BUGS FAQ"
diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild
deleted file mode 100644
index 461c4f51b071..000000000000
--- a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild
+++ /dev/null
@@ -1,41 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI="5"
-
-BIOPERL_RELEASE=1.6.9
-
-MY_PN=BioPerl-Run
-MODULE_AUTHOR=CJFIELDS
-MODULE_VERSION=1.006900
-inherit perl-module
-
-DESCRIPTION="Perl wrapper modules for key bioinformatics applications"
-HOMEPAGE="http://www.bioperl.org/"
-
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="minimal test"
-#SRC_TEST="do"
-
-RESTRICT="test"
-
-CDEPEND=">=sci-biology/bioperl-${BIOPERL_RELEASE}
-	!minimal? (
-		dev-perl/Algorithm-Diff
-		dev-perl/XML-Twig
-		dev-perl/IO-String
-		dev-perl/IPC-Run
-		dev-perl/File-Sort
-	)"
-DEPEND="dev-perl/Module-Build
-	${CDEPEND}"
-RDEPEND="${CDEPEND}"
-
-src_install() {
-	mydoc="AUTHORS BUGS FAQ"
-	perl-module_src_install
-	# TODO: File collision in Bio/ConfigData.pm (a Module::Build internal file)
-	# with sci-biology/bioperl. Workaround: the "nuke it from orbit" solution :D
-	#find "${D}" -name '*ConfigData*' -print -delete
-}