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authorV3n3RiX <venerix@redcorelinux.org>2018-04-22 14:25:03 +0100
committerV3n3RiX <venerix@redcorelinux.org>2018-04-22 14:25:03 +0100
commit5e8702bcbbed438e6c6cce023e7ef0cc9baa3e02 (patch)
treeb041acef19bb9ae66c228d5c9d34d1e00aeb2b95 /sci-biology
parent5cfef3c94cd7e82136c69a0322f5ba21f7e64632 (diff)
gentoo resync : 22.04.2018
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/Manifest.gzbin25298 -> 25299 bytes
-rw-r--r--sci-biology/biopandas/Manifest4
-rw-r--r--sci-biology/biopandas/biopandas-0.1.4.ebuild2
-rw-r--r--sci-biology/biopandas/biopandas-0.2.1.ebuild2
-rw-r--r--sci-biology/biopython/Manifest2
-rw-r--r--sci-biology/biopython/biopython-1.68.ebuild2
-rw-r--r--sci-biology/pysam/Manifest2
-rw-r--r--sci-biology/pysam/pysam-0.12.0.1.ebuild2
8 files changed, 8 insertions, 8 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz
index 951a3a289fa6..e8b2651cb0ec 100644
--- a/sci-biology/Manifest.gz
+++ b/sci-biology/Manifest.gz
Binary files differ
diff --git a/sci-biology/biopandas/Manifest b/sci-biology/biopandas/Manifest
index 46c5b486c657..6f225c710525 100644
--- a/sci-biology/biopandas/Manifest
+++ b/sci-biology/biopandas/Manifest
@@ -1,5 +1,5 @@
DIST biopandas-0.1.4.tar.gz 5386 BLAKE2B 0ee7f9ddc9d6c51466ad601e0144ef4f073d7e4dd41be804ff9a0f1cd9e00f0b0dffb240985a92bfa948588521e8a17c68e498ec2b824421fc73754d17cb2722 SHA512 efd7ec94bbcc069d8bf0d160480e7ef2c7c0f9febe21a684b46b6b14c69cebb0b3d9f2c315897be6b0ae888ed40731e2f5a16dee45b9c932b05c2c0209b62b84
DIST biopandas-0.2.1.tar.gz 209379 BLAKE2B 839a6f569f12b95c9b1c75dc755d009c77d7ef8224e517aed5026ffa6c33bd3826fe3862fec03469e967005a500600782fc372951d61358e2fe3bb56af734228 SHA512 0ea7aec84251d8d6ec4736c4968228133bd8622afb17d6916287168cb9f9757c5a97a4d5a52ac0e2f30027bf0edf9d76413db142f70d606f1359b8a4e06de7c8
-EBUILD biopandas-0.1.4.ebuild 1067 BLAKE2B 7b1e9176c92d0e6a672f8abb874fe1be49e9808e27cef115a481366b40f2e5e3df2394cb62a75921ff0f65f13f68087bc8e4bfe6789bf465ba3851662dc91bcb SHA512 9bd16c56d2a85d3f7e5db4c5eca0bbe73aec7ba975e0391cf4dba848f25cdc97a5ddab21ee1581fdfb15026fb9d5b9edbda5d65a33013c25f35741b4c9e19acf
-EBUILD biopandas-0.2.1.ebuild 1069 BLAKE2B 7d521f9d820799df9794914e537cb46f236de8fd04c4df057a16d79ed4d95ded7290df56bccf601ef3df726e01eedcbd76eae791c281fb11e8755d97e19d03c7 SHA512 c22c2233f8cc176f67f4a3786067549fdb59f589ece5e23d78254ec570ce220bdc0e7f39a3061a3d8b91c54f974993742450c644c444aa957b805d5ad4332c43
+EBUILD biopandas-0.1.4.ebuild 1063 BLAKE2B c3ff0bbdae770568b9e21d606d44a30fc2cad09b06276b8f9037f210992b2a0f5191b12d5c2db1a325d8d8db0ade364d63ea4899adbd86537f92a2cb8bb881f2 SHA512 e17fe5110a1a3d5b0c4da0290177ebf86b36ae2811bb3342dcdc415247702633b1e8bf8138621b5c2d6572071ec5792b5e8d4ae24e90ade12856400582a74409
+EBUILD biopandas-0.2.1.ebuild 1065 BLAKE2B 40857a9dc256083ba9869198cc88a6061eca006bbbe717ea8381b6aedb0c5bb6638a7d31fbd5c21a0aaa7dbf3b3703c3b10a998c873193a9861216041239f652 SHA512 aaaa676c18347589a3784eddd14e76db13b6c414dff48cffc9e2c2161cc76e90c0034dc2dde7136e91e9a19fa2b771e89a7e38361321bcf5245fe2607c5d5b17
MISC metadata.xml 536 BLAKE2B e3cb776d0332fff486a7e1ea1353c54694ff687d4685bbb51728db0ed2025bb3d09d39cf7c9ea9f11546cbf9c4727661348e2f5fdfc13ffac2329ef6dfbe7450 SHA512 502803e30ecfac53516b56501a7bffeb49c3c0bc44ce5b3dd87aac5c745de614c235523ba3be374fcbede1a9a7bcf11c328abb27d82e087b275303f38b80b166
diff --git a/sci-biology/biopandas/biopandas-0.1.4.ebuild b/sci-biology/biopandas/biopandas-0.1.4.ebuild
index 26e41891d0b2..9e1fdc736873 100644
--- a/sci-biology/biopandas/biopandas-0.1.4.ebuild
+++ b/sci-biology/biopandas/biopandas-0.1.4.ebuild
@@ -14,7 +14,7 @@ DESCRIPTION="Molecular Structures in Pandas DataFrames"
HOMEPAGE="
https://rasbt.github.io/biopandas/
https://github.com/rasbt/biopandas
- https://pypi.python.org/pypi/BioPandas"
+ https://pypi.org/project/BioPandas"
SRC_URI="mirror://pypi/${MY_P:0:1}/${MY_PN}/${P}.tar.gz"
LICENSE="BSD"
diff --git a/sci-biology/biopandas/biopandas-0.2.1.ebuild b/sci-biology/biopandas/biopandas-0.2.1.ebuild
index 5243039d53b6..c8a752dce84f 100644
--- a/sci-biology/biopandas/biopandas-0.2.1.ebuild
+++ b/sci-biology/biopandas/biopandas-0.2.1.ebuild
@@ -14,7 +14,7 @@ DESCRIPTION="Molecular Structures in Pandas DataFrames"
HOMEPAGE="
https://rasbt.github.io/biopandas/
https://github.com/rasbt/biopandas
- https://pypi.python.org/pypi/BioPandas"
+ https://pypi.org/project/BioPandas"
SRC_URI="mirror://pypi/${MY_P:0:1}/${MY_PN}/${P}.tar.gz"
LICENSE="BSD"
diff --git a/sci-biology/biopython/Manifest b/sci-biology/biopython/Manifest
index 8ce43af0c16a..86e017fc57d6 100644
--- a/sci-biology/biopython/Manifest
+++ b/sci-biology/biopython/Manifest
@@ -1,3 +1,3 @@
DIST biopython-1.68.tar.gz 14445813 BLAKE2B 566931c4e522e95278f7f6a9dc07ecc091dc54b69cdea8bb07603339af4f1fd38e3df87482e97729acb776dd2df19a4e61d49ee7608ec5cb0f24966e28c2e3dd SHA512 0ca994475654bb68ff326c8e86cbd4547cd87b42e1633dda039ad668e1298884b22e169f6b25ab514e929861334a93b7db6d057a3486cea9997ca2de95c61a69
-EBUILD biopython-1.68.ebuild 1645 BLAKE2B 1faec1b5734c7364ee7290c412f363da050bf2dde7406e3ab311427863608f5678bb4e708a54b76f7457b3fe21d46c71c1912be0bc053a286333e1acc95fd08f SHA512 23418100fa56983329f389e46f1124e3e03eca7614fac6c9465a53be765742e50029060f3c9efbea8ab2eeba02eb1c617e705c26fee65a47d030d0e436b97f03
+EBUILD biopython-1.68.ebuild 1641 BLAKE2B a66e9c4a4c4987809faa18742b345fad45c6c6e536c1a87dfc552345637f1b7df28426a314df4b2f7e523002229395e978b75548b907f0a7aac6d80ee893d1b3 SHA512 e30c9f8b542ef0508a6fea508461521cbdc140a0c1e1f08eddfaef6dd73c10496f1d2fdc26261c26a5c860ffba845c1e6bb6f82d8722d0c7a1a89253c3a7a7f1
MISC metadata.xml 267 BLAKE2B 7cf386952842945148119de3263231db4d1046d5f54811f7e303ed8ec4d27cbc1960b99c92daf6f32e5b981c2fb9f50ec666be6193865d6e18541b7427a152a9 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403
diff --git a/sci-biology/biopython/biopython-1.68.ebuild b/sci-biology/biopython/biopython-1.68.ebuild
index d0934b9879d9..9c8442e39090 100644
--- a/sci-biology/biopython/biopython-1.68.ebuild
+++ b/sci-biology/biopython/biopython-1.68.ebuild
@@ -8,7 +8,7 @@ PYTHON_COMPAT=( python2_7 python3_{4,5} pypy )
inherit distutils-r1 eutils
DESCRIPTION="Python modules for computational molecular biology"
-HOMEPAGE="http://www.biopython.org/ https://pypi.python.org/pypi/biopython/"
+HOMEPAGE="http://www.biopython.org/ https://pypi.org/project/biopython/"
SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz"
LICENSE="HPND"
diff --git a/sci-biology/pysam/Manifest b/sci-biology/pysam/Manifest
index 4c6ba6a2cd39..24f60a28e9f5 100644
--- a/sci-biology/pysam/Manifest
+++ b/sci-biology/pysam/Manifest
@@ -1,4 +1,4 @@
AUX pysam-0.12-fix-buildsystem.patch 2356 BLAKE2B 95542f99b411a00eeaa24836cb7489bf2bbf690d804669f69f6f1a8c07f66d9c6ef34624eb511036cd36b1268b49959d38db497cb557e9cc40f3a35b2d349f4d SHA512 24c5c521ddd2e8a88a713c2cab2aedb0cd9a589e2ae87696a60815f9714e2b222a5e0824c5ac293f9023f6f772a599256a5c07228b5a2df40b62a1bf7616c84a
DIST pysam-0.12.0.1.tar.gz 2672020 BLAKE2B 4bc6330405724f7b1126da91ba3338687f4dd17f015895f42b971f22ffbb6c32eda65e2667035a4cc830c0370b34d95d3aa6ae0f026b2b3276af1fd6841eed28 SHA512 31460ca98ad2ac5489905ffce76bfbb5bf4a295159f3cc8e088c78dcfbfc34b30d6f7871fd1454de01da98f82b7438ac2aca678a771d7b97ae0029a418f29f1d
-EBUILD pysam-0.12.0.1.ebuild 1204 BLAKE2B 4e59634e13a123969b1749122b197b4145fcc9db660003d1d812a950d06c246437a60b439ee5f0c18c378ac8ffd7f44c1031f51773de52808d97759f2b65071e SHA512 cca0548e77c3c3cd10f6253cdafb7be9c2ae094490aa9dd019b7b09e5cd0f273e9a350275a35eb55d6ddce4e46cc549f7b462f5fd4b06cfa012f1344263d41a7
+EBUILD pysam-0.12.0.1.ebuild 1200 BLAKE2B bda63a62df74d841da55bdbc9ff8fe53d2e2e26836b0ffa339272d74d2318f030caecba25c0e9efb0ba404104f4e8a3446b59d647fba45e57bd28d5fd54b451f SHA512 98feb2846998b0f429520dec5fc28882bbdfe1975b60e9775d4667b8c5698732a72ef1d167ed0126e52ca946b823f92d25cab91aabae77a081353d0d0b058796
MISC metadata.xml 410 BLAKE2B ed86e3ffe38a306e581762625b37cf6596dc2a2ba404406ab12f681d5b48529764e281d40411bedbdf6016bc57d02adb705e8c8703b8120cf89b4961f75bed67 SHA512 38bcd511561b2466ef5d39473a6d1a838af0aff6eeb520307331fe0fc3177be3062fa0be39f48a333bb8e31841115cafd9dfb80a5985c316c9b8df1609f00810
diff --git a/sci-biology/pysam/pysam-0.12.0.1.ebuild b/sci-biology/pysam/pysam-0.12.0.1.ebuild
index 1f4f58fdfe29..d8328951bb17 100644
--- a/sci-biology/pysam/pysam-0.12.0.1.ebuild
+++ b/sci-biology/pysam/pysam-0.12.0.1.ebuild
@@ -10,7 +10,7 @@ inherit distutils-r1
DESCRIPTION="Python interface for the SAM/BAM sequence alignment and mapping format"
HOMEPAGE="
https://github.com/pysam-developers/pysam
- https://pypi.python.org/pypi/pysam"
+ https://pypi.org/project/pysam"
SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
LICENSE="MIT"