diff options
author | V3n3RiX <venerix@redcorelinux.org> | 2018-05-08 14:01:34 +0100 |
---|---|---|
committer | V3n3RiX <venerix@redcorelinux.org> | 2018-05-08 14:01:34 +0100 |
commit | 4645b6f17f0da81e9fe84081fb126a37102ba153 (patch) | |
tree | e6c48cf3db2213af38cf528a5364fffd5c74c6d6 /metadata/md5-cache/sci-biology | |
parent | ebce8994fe3cc4ca9fbc96ca837cb4c4e98adcbd (diff) |
gentoo resync : 08.05.2018
Diffstat (limited to 'metadata/md5-cache/sci-biology')
34 files changed, 39 insertions, 39 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 b/metadata/md5-cache/sci-biology/HTSeq-0.9.1 index 5775ba152ce3..b4c09c1b2318 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 +++ b/metadata/md5-cache/sci-biology/HTSeq-0.9.1 @@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(- REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 ) SLOT=0 SRC_URI=mirror://pypi/H/HTSeq/HTSeq-0.9.1.tar.gz -_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=baebb3e5c138076f90cdaad5bc41573f diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index 5f548ad272a1..acc9ab8c5b99 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -8,5 +8,5 @@ LICENSE=GPL-3+ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 ) SLOT=0 -_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 git-r3 25b08efef07cea6bcd45b8c6dcce2782 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 git-r3 af51ccfceeb403ab80f1bf9209d372c8 multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=baebb3e5c138076f90cdaad5bc41573f diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex e73af3fcdc2b..25888f015fb5 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 index a034bd77385e..fff2a76d0efd 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 -_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=aec6d1c76d5ea621c66e803800e2b3c4 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.1 b/metadata/md5-cache/sci-biology/bamtools-2.5.1 index 81f5d5b1a05d..61512abdac7f 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.1 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.1 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.1 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.1.tar.gz -> bamtools-2.5.1.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=2f7d6b2856395f0920d7b682b6bbad56 diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 15cc48d829bb..84e8e65e1e35 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -7,5 +7,5 @@ IUSE=static-libs LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=2f7d6b2856395f0920d7b682b6bbad56 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.5 b/metadata/md5-cache/sci-biology/bcftools-1.5 index 5acc345c6c5e..1a8ebc62d6e7 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.5 +++ b/metadata/md5-cache/sci-biology/bcftools-1.5 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5*:= sys-libs/zlib python_targets_pytho REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.5/bcftools-1.5.tar.bz2 -_eclasses_=multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=e289371e3fec376baf8fe36c652ca521 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0 index d085e8059fc4..aad1f6ce6e87 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.26.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz https://dev.gentoo.org/~mgorny/dist/bedtools-2.26.0-fix-buildsystem.patch.bz2 -_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=e072d90aa6492a70f261161c8d5551e5 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4 index f6d85f99c225..e30cde012868 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.1.4 +++ b/metadata/md5-cache/sci-biology/biopandas-0.1.4 @@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(- REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz -_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=0cd8b2ce25811b0d0249bc4c771daa24 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.1 b/metadata/md5-cache/sci-biology/biopandas-0.2.1 index f3a6d5cbf0e2..b3e9f395a77f 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.1 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.1 @@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(- REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.1.tar.gz -_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=ea88f22f7675491064ad08658a2ba291 diff --git a/metadata/md5-cache/sci-biology/biopython-1.68 b/metadata/md5-cache/sci-biology/biopython-1.68 index ec38c1696eff..f0e131972ad6 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.68 +++ b/metadata/md5-cache/sci-biology/biopython-1.68 @@ -10,5 +10,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 ) SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.68.tar.gz -_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=d27e2e9df832a55985e7f459f9e4fa81 diff --git a/metadata/md5-cache/sci-biology/bioruby-1.5.1 b/metadata/md5-cache/sci-biology/bioruby-1.5.1 index d567b3651e74..1e92784c041d 100644 --- a/metadata/md5-cache/sci-biology/bioruby-1.5.1 +++ b/metadata/md5-cache/sci-biology/bioruby-1.5.1 @@ -1,14 +1,14 @@ DEFINED_PHASES=compile configure install prepare setup test unpack -DEPEND=test? ( ruby_targets_ruby23? ( dev-ruby/libxml[ruby_targets_ruby23] ) ) ruby_targets_ruby23? ( dev-lang/ruby:2.3 ) ruby_targets_ruby23? ( doc? ( dev-ruby/rake[ruby_targets_ruby23] ) ) ruby_targets_ruby23? ( test? ( dev-ruby/rake[ruby_targets_ruby23] ) ) ruby_targets_ruby23? ( virtual/rubygems[ruby_targets_ruby23] ) test? ( ruby_targets_ruby23? ( virtual/rubygems[ruby_targets_ruby23] ) ) +DEPEND=test? ( ruby_targets_ruby23? ( dev-ruby/libxml[ruby_targets_ruby23] ) ruby_targets_ruby24? ( dev-ruby/libxml[ruby_targets_ruby24] ) ) ruby_targets_ruby23? ( dev-lang/ruby:2.3 ) ruby_targets_ruby24? ( dev-lang/ruby:2.4 ) ruby_targets_ruby23? ( doc? ( dev-ruby/rake[ruby_targets_ruby23] ) ) ruby_targets_ruby24? ( doc? ( dev-ruby/rake[ruby_targets_ruby24] ) ) ruby_targets_ruby23? ( test? ( dev-ruby/rake[ruby_targets_ruby23] ) ) ruby_targets_ruby24? ( test? ( dev-ruby/rake[ruby_targets_ruby24] ) ) ruby_targets_ruby23? ( virtual/rubygems[ruby_targets_ruby23] ) ruby_targets_ruby24? ( virtual/rubygems[ruby_targets_ruby24] ) test? ( ruby_targets_ruby23? ( virtual/rubygems[ruby_targets_ruby23] ) ruby_targets_ruby24? ( virtual/rubygems[ruby_targets_ruby24] ) ) DESCRIPTION=An integrated environment for bioinformatics using the Ruby language EAPI=6 HOMEPAGE=http://bioruby.org/ -IUSE=test elibc_FreeBSD ruby_targets_ruby23 doc test test +IUSE=test elibc_FreeBSD ruby_targets_ruby23 ruby_targets_ruby24 doc test test KEYWORDS=amd64 ~ppc x86 LICENSE=Ruby -RDEPEND=ruby_targets_ruby23? ( dev-ruby/libxml[ruby_targets_ruby23] ) ruby_targets_ruby23? ( dev-lang/ruby:2.3 ) ruby_targets_ruby23? ( virtual/rubygems[ruby_targets_ruby23] ) -REQUIRED_USE=|| ( ruby_targets_ruby23 ) +RDEPEND=ruby_targets_ruby23? ( dev-ruby/libxml[ruby_targets_ruby23] ) ruby_targets_ruby24? ( dev-ruby/libxml[ruby_targets_ruby24] ) ruby_targets_ruby23? ( dev-lang/ruby:2.3 ) ruby_targets_ruby24? ( dev-lang/ruby:2.4 ) ruby_targets_ruby23? ( virtual/rubygems[ruby_targets_ruby23] ) ruby_targets_ruby24? ( virtual/rubygems[ruby_targets_ruby24] ) +REQUIRED_USE=|| ( ruby_targets_ruby23 ruby_targets_ruby24 ) SLOT=0 SRC_URI=mirror://rubygems/bio-1.5.1.gem -_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 ruby-fakegem cf1343b57e8029745950b4b147ff4d3a ruby-ng c1f44e746d7656dd6e02d8815ff9518a ruby-utils e5942a80e3c3b936c6b84d6dc4af9f9c toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 -_md5_=86363a7bfb4b82d4d29cabbf3c45a28d +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 ruby-fakegem 28631ba8ae1b3218596c0eb3e38c438e ruby-ng c1f44e746d7656dd6e02d8815ff9518a ruby-utils e5942a80e3c3b936c6b84d6dc4af9f9c toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 +_md5_=2aecf9a558ab9d1f3e8760530ccd8e56 diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 index 7bdafe2d2a89..ca701f9eb6d4 100644 --- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 +++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.62.0:= python_targets REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz -_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=816b8cb2b88b4938d0bf5ea1db34170b diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1 index 51ad4b54e546..8899eabb1e03 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5-r1 +++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=6d15a446bfc7659cceaabe3567001583 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index dc306f6344f9..9511ea0a279e 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=a2d4ea80b964801c45f62ae737430d6d diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7 index d14150eca631..7e05558a0ac2 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.7 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=20d72299931c8f8e092006a9b668182c diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index dd27366bb2ec..2ce375679365 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=f2b648d93a4c0ca58285574958cde15a diff --git a/metadata/md5-cache/sci-biology/kallisto-0.43.1 b/metadata/md5-cache/sci-biology/kallisto-0.43.1 index 682ead721a37..9f10dabb22bc 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.43.1 +++ b/metadata/md5-cache/sci-biology/kallisto-0.43.1 @@ -8,5 +8,5 @@ LICENSE=BSD RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz -> kallisto-0.43.1.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/kallisto-9999 b/metadata/md5-cache/sci-biology/kallisto-9999 index 85afffcf4d78..930ebe8e733c 100644 --- a/metadata/md5-cache/sci-biology/kallisto-9999 +++ b/metadata/md5-cache/sci-biology/kallisto-9999 @@ -6,5 +6,5 @@ HOMEPAGE=http://pachterlab.github.io/kallisto/ LICENSE=BSD RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/last-299-r1 b/metadata/md5-cache/sci-biology/last-299-r1 index 09c44a477231..3dfd2664ef00 100644 --- a/metadata/md5-cache/sci-biology/last-299-r1 +++ b/metadata/md5-cache/sci-biology/last-299-r1 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://last.cbrc.jp/last-299.zip -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=ec5206661373a6ef6ad77450dfbdb915 diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 index 9ebba34ac07e..7f42f3fc5a68 100644 --- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 +++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz -_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec versionator 26ca8a8bd95d6a74122c08ba98a4ee72 +_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec versionator 26ca8a8bd95d6a74122c08ba98a4ee72 _md5_=a4080439675628436c06de8db9f59c6e diff --git a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 b/metadata/md5-cache/sci-biology/pysam-0.12.0.1 index b1f595a09ff6..1e6be79b2f86 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 +++ b/metadata/md5-cache/sci-biology/pysam-0.12.0.1 @@ -10,5 +10,5 @@ RDEPEND==sci-libs/htslib-1.5*:= python_targets_python2_7? ( >=dev-lang/python-2. REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 ) SLOT=0 SRC_URI=mirror://pypi/p/pysam/pysam-0.12.0.1.tar.gz -_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=c02049dd445007999f7534a8e5d17656 diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 index 46143ff21d5e..2c1f796b7155 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=fa48f0b2be780a9264eb9d727ec53335 diff --git a/metadata/md5-cache/sci-biology/samtools-1.5 b/metadata/md5-cache/sci-biology/samtools-1.5 index 877ce0a522bd..d41144e1844b 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.5 +++ b/metadata/md5-cache/sci-biology/samtools-1.5 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib py REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.5.tar.bz2 -_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=8d92b4a814f62eab87bac2be22c2470c diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index 801c7081d45c..dd1864b13a51 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b6c214312349c09a0fe901e8d0235a32 diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 index 2c333e1d86d2..a2ebf38a593f 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seqan REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=0a4cc55d3cd27897618671fdafc13e2f diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0 b/metadata/md5-cache/sci-biology/seqan-2.4.0 index 377b11b1e9c6..be01e2e9368f 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/s REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=ca34cde2b2fc2f8692469a016bc077f6 diff --git a/metadata/md5-cache/sci-biology/seqan-9999 b/metadata/md5-cache/sci-biology/seqan-9999 index 2bddb42d041a..c776ea67cb2d 100644 --- a/metadata/md5-cache/sci-biology/seqan-9999 +++ b/metadata/md5-cache/sci-biology/seqan-9999 @@ -8,5 +8,5 @@ LICENSE=BSD GPL-3 RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=954c2a9b05e60f6a61eb27c1cc720117 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index c0d93ac37427..67ac6aa66a5c 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -10,5 +10,5 @@ RDEPEND=!sci-mathematics/cado-nfs python_targets_python2_7? ( >=dev-lang/python- REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz -_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=98a7a2b9765ad5e245b1b7b9be67060b diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 index 66995e9fc59c..35cbf3851993 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz -_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=efee8069c83c578acac8e57b429ad985 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 8897384fcac9..ace4ecb4a829 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=6adcbb8c658bdc3c40f797c61f5c58b0 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index 68fd2678eec4..d22cc20e395d 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz -_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=1e58c830b49ced05ae9960fcc2dead13 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index 79fc0f195d33..e17b7428b55b 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz -_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b2a6486af275e75c6365ab7eeba1e0bd diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 index ceef98c721c5..b0b093f9621a 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 @@ -4,10 +4,10 @@ DESCRIPTION=The Celera de novo whole-genome shotgun DNA sequence assembler, aka EAPI=6 HOMEPAGE=https://sourceforge.net/projects/wgs-assembler/ IUSE=static-libs -KEYWORDS=~amd64 ~x86 +KEYWORDS=amd64 x86 LICENSE=GPL-2 RDEPEND=net-libs/libtirpc x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 _eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf -_md5_=a8a806da02a9f269cc580e3560e5a038 +_md5_=cb4182fc2947f2a3efa19db296a6a76f |