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authorV3n3RiX <venerix@redcorelinux.org>2018-05-06 11:18:16 +0100
committerV3n3RiX <venerix@redcorelinux.org>2018-05-06 11:18:16 +0100
commitebce8994fe3cc4ca9fbc96ca837cb4c4e98adcbd (patch)
treef2204ce5f94dc3cb13728ff93649d889944952bb /metadata/md5-cache/sci-biology
parentfe1c8b732bd548b699d4c2ef725f67f8b8c8911c (diff)
gentoo resync : 06.05.2018
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r--metadata/md5-cache/sci-biology/ApE-2.0.7-r12
-rw-r--r--metadata/md5-cache/sci-biology/GBrowse-2.48-r12
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-0.9.12
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-99992
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin33269 -> 33284 bytes
-rw-r--r--metadata/md5-cache/sci-biology/STAR-2.5.3a2
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.0.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.0.32
-rw-r--r--metadata/md5-cache/sci-biology/allpathslg-52488-r22
-rw-r--r--metadata/md5-cache/sci-biology/amap-2.2-r32
-rw-r--r--metadata/md5-cache/sci-biology/amos-3.1.0-r42
-rw-r--r--metadata/md5-cache/sci-biology/arb-6.0.62
-rw-r--r--metadata/md5-cache/sci-biology/ariadne-1.3-r32
-rw-r--r--metadata/md5-cache/sci-biology/augustus-2.5.52
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-2.5.12
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-99992
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.52
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.26.02
-rw-r--r--metadata/md5-cache/sci-biology/bfast-0.7.0a2
-rw-r--r--metadata/md5-cache/sci-biology/biogrep-1.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.1.42
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.2.12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-db-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-db-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-network-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-network-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-run-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-run-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.682
-rw-r--r--metadata/md5-cache/sci-biology/bioruby-1.5.12
-rw-r--r--metadata/md5-cache/sci-biology/blat-34-r22
-rw-r--r--metadata/md5-cache/sci-biology/blossoc-1.4.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-1.1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-2.2.92
-rw-r--r--metadata/md5-cache/sci-biology/bwa-0.7.16a2
-rw-r--r--metadata/md5-cache/sci-biology/cd-hit-4.6.62
-rw-r--r--metadata/md5-cache/sci-biology/clustal-omega-1.2.42
-rw-r--r--metadata/md5-cache/sci-biology/clustalw-1.83-r42
-rw-r--r--metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r22
-rw-r--r--metadata/md5-cache/sci-biology/clustalx-2.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/consed-292
-rw-r--r--metadata/md5-cache/sci-biology/cufflinks-2.2.1-r22
-rw-r--r--metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r22
-rw-r--r--metadata/md5-cache/sci-biology/dialign2-2.2.12
-rw-r--r--metadata/md5-cache/sci-biology/diya-1.0_rc42
-rw-r--r--metadata/md5-cache/sci-biology/elph-1.0.1-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domalign-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domsearch-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-emnu-1.05.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-meme-4.7.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-mse-3.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-signature-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-structure-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-topo-2.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.6602
-rw-r--r--metadata/md5-cache/sci-biology/emboss-6.6.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/eugene-4.1d2
-rw-r--r--metadata/md5-cache/sci-biology/exonerate-2.2.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/express-0.9.5-r12
-rw-r--r--metadata/md5-cache/sci-biology/express-1.5.12
-rw-r--r--metadata/md5-cache/sci-biology/fasta-36.3.5e2
-rw-r--r--metadata/md5-cache/sci-biology/fasttree-2.1.72
-rw-r--r--metadata/md5-cache/sci-biology/fasttree-2.1.82
-rw-r--r--metadata/md5-cache/sci-biology/fastx_toolkit-0.0.142
-rw-r--r--metadata/md5-cache/sci-biology/finchtv-1.3.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/foldingathome-7.4.4-r32
-rw-r--r--metadata/md5-cache/sci-biology/gatk-2.42
-rw-r--r--metadata/md5-cache/sci-biology/gatk-99992
-rw-r--r--metadata/md5-cache/sci-biology/gibbs-3.12
-rw-r--r--metadata/md5-cache/sci-biology/glimmer-3.02-r32
-rw-r--r--metadata/md5-cache/sci-biology/glimmer-3.02b2
-rw-r--r--metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r12
-rw-r--r--metadata/md5-cache/sci-biology/goby-1.9.7.3-r12
-rw-r--r--metadata/md5-cache/sci-biology/goby-1.9.8.1-r12
-rw-r--r--metadata/md5-cache/sci-biology/goby-cpp-1.9.7.32
-rw-r--r--metadata/md5-cache/sci-biology/goby-cpp-1.9.8.12
-rw-r--r--metadata/md5-cache/sci-biology/goby-cpp-2.0.12
-rw-r--r--metadata/md5-cache/sci-biology/iedera-1.05-r12
-rw-r--r--metadata/md5-cache/sci-biology/kalign-2.03-r22
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-0.43.12
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-99992
-rw-r--r--metadata/md5-cache/sci-biology/lagan-2.0-r32
-rw-r--r--metadata/md5-cache/sci-biology/last-2302
-rw-r--r--metadata/md5-cache/sci-biology/last-299-r12
-rw-r--r--metadata/md5-cache/sci-biology/libgtextutils-0.6.12
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.0502
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.2152
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.3052
-rw-r--r--metadata/md5-cache/sci-biology/maq-0.7.1-r22
-rw-r--r--metadata/md5-cache/sci-biology/maqview-0.2.5-r32
-rw-r--r--metadata/md5-cache/sci-biology/mcl-08.3122
-rw-r--r--metadata/md5-cache/sci-biology/mcl-12.1352
-rw-r--r--metadata/md5-cache/sci-biology/mcl-14.1372
-rw-r--r--metadata/md5-cache/sci-biology/meme-4.11.2_p22
-rw-r--r--metadata/md5-cache/sci-biology/mira-4.0.22
-rw-r--r--metadata/md5-cache/sci-biology/mosaik-2.2.302
-rw-r--r--metadata/md5-cache/sci-biology/mothur-1.27.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/mrbayes-3.1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/mrbayes-3.1.2-r22
-rw-r--r--metadata/md5-cache/sci-biology/mummer-3.232
-rw-r--r--metadata/md5-cache/sci-biology/muscle-3.8.312
-rw-r--r--metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r22
-rw-r--r--metadata/md5-cache/sci-biology/njplot-2.3-r22
-rw-r--r--metadata/md5-cache/sci-biology/pals-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/paml-4.4c-r12
-rw-r--r--metadata/md5-cache/sci-biology/phrap-1.080812-r22
-rw-r--r--metadata/md5-cache/sci-biology/phred-071220-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.69-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.696-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.696-r22
-rw-r--r--metadata/md5-cache/sci-biology/phyml-2.4.5-r32
-rw-r--r--metadata/md5-cache/sci-biology/picard-1.1032
-rw-r--r--metadata/md5-cache/sci-biology/piler-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/pilercr-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/plink-1.07-r12
-rw-r--r--metadata/md5-cache/sci-biology/plink-1.90_pre1405142
-rw-r--r--metadata/md5-cache/sci-biology/poa-2-r12
-rw-r--r--metadata/md5-cache/sci-biology/prank-1406032
-rw-r--r--metadata/md5-cache/sci-biology/primer3-2.3.72
-rw-r--r--metadata/md5-cache/sci-biology/probcons-1.12-r12
-rw-r--r--metadata/md5-cache/sci-biology/prodigal-2.6.32
-rw-r--r--metadata/md5-cache/sci-biology/profphd-1.0.392
-rw-r--r--metadata/md5-cache/sci-biology/profphd-1.0.402
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.2.12
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.32
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.42
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.52
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.12.0.12
-rw-r--r--metadata/md5-cache/sci-biology/qrna-2.0.3c-r32
-rw-r--r--metadata/md5-cache/sci-biology/raxml-7.2.62
-rw-r--r--metadata/md5-cache/sci-biology/recon-1.082
-rw-r--r--metadata/md5-cache/sci-biology/rmblast-1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/rnaview-20040713-r42
-rw-r--r--metadata/md5-cache/sci-biology/samtools-0.1.20-r32
-rw-r--r--metadata/md5-cache/sci-biology/samtools-1.52
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.3.52
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.5.42
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.62
-rw-r--r--metadata/md5-cache/sci-biology/seqan-1.4.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-2.2.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-2.4.02
-rw-r--r--metadata/md5-cache/sci-biology/seqan-99992
-rw-r--r--metadata/md5-cache/sci-biology/shrimp-2.0.12
-rw-r--r--metadata/md5-cache/sci-biology/shrimp-2.2.32
-rw-r--r--metadata/md5-cache/sci-biology/sibsim4-0.202
-rw-r--r--metadata/md5-cache/sci-biology/sim4-20030921-r22
-rw-r--r--metadata/md5-cache/sci-biology/snpfile-2.0.1-r22
-rw-r--r--metadata/md5-cache/sci-biology/stride-20011129-r12
-rw-r--r--metadata/md5-cache/sci-biology/t-coffee-11.00-r22
-rw-r--r--metadata/md5-cache/sci-biology/tophat-2.1.1-r42
-rw-r--r--metadata/md5-cache/sci-biology/tree-puzzle-5.22
-rw-r--r--metadata/md5-cache/sci-biology/treeviewx-0.5.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/trnascan-se-1.312
-rw-r--r--metadata/md5-cache/sci-biology/uchime-4.2.402
-rw-r--r--metadata/md5-cache/sci-biology/ucsc-genome-browser-2602
-rw-r--r--metadata/md5-cache/sci-biology/unafold-3.8-r12
-rw-r--r--metadata/md5-cache/sci-biology/vaal-46233-r22
-rw-r--r--metadata/md5-cache/sci-biology/vcftools-0.1.142
-rw-r--r--metadata/md5-cache/sci-biology/velvet-1.0.18-r12
-rw-r--r--metadata/md5-cache/sci-biology/velvet-1.2.102
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.12
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.82
-rw-r--r--metadata/md5-cache/sci-biology/wgs-assembler-7.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/wgs-assembler-7.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/wise-2.4.0_alpha2
-rw-r--r--metadata/md5-cache/sci-biology/yass-1.14-r22
175 files changed, 174 insertions, 174 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
index cd1e4251789e..3de7b67ea503 100644
--- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
+++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
@@ -9,5 +9,5 @@ RDEPEND=dev-lang/tcl:0 dev-lang/tk:0
RESTRICT=mirror
SLOT=0
SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=bf78ab8abbdb34e4f7d5c8a0b4429c0f
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
index 21fd7e73d63e..e6448098c42e 100644
--- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
+++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
@@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ )
RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15
SLOT=0
SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp a76ebd3cb5649737496e8238992dd7ca
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp a76ebd3cb5649737496e8238992dd7ca
_md5_=bccaeef3292f6df307fc14fb5a2a74b2
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 b/metadata/md5-cache/sci-biology/HTSeq-0.9.1
index 195521162a3d..5775ba152ce3 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-0.9.1
+++ b/metadata/md5-cache/sci-biology/HTSeq-0.9.1
@@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/H/HTSeq/HTSeq-0.9.1.tar.gz
-_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=baebb3e5c138076f90cdaad5bc41573f
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index a5f38895dfbc..5f548ad272a1 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -8,5 +8,5 @@ LICENSE=GPL-3+
RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
-_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 git-r3 25b08efef07cea6bcd45b8c6dcce2782 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 git-r3 25b08efef07cea6bcd45b8c6dcce2782 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=baebb3e5c138076f90cdaad5bc41573f
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index 183332805088..e73af3fcdc2b 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/STAR-2.5.3a b/metadata/md5-cache/sci-biology/STAR-2.5.3a
index bb84f9e1a43e..005aee285be4 100644
--- a/metadata/md5-cache/sci-biology/STAR-2.5.3a
+++ b/metadata/md5-cache/sci-biology/STAR-2.5.3a
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=sci-libs/htslib:=
SLOT=0
SRC_URI=https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz -> STAR-2.5.3a.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=1eb821b9192887ab1f2ac6b1536037ac
diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
index e439b99197a9..b37bf39fb77f 100644
--- a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
+++ b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
@@ -9,5 +9,5 @@ LICENSE=abyss
RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi )
SLOT=0
SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.2.tar.gz -> abyss-2.0.2.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=3b173739bd4e2f9d61a49918b3b8bc05
diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3 b/metadata/md5-cache/sci-biology/abyss-2.0.3
index b497d0f24839..a9930f498eea 100644
--- a/metadata/md5-cache/sci-biology/abyss-2.0.3
+++ b/metadata/md5-cache/sci-biology/abyss-2.0.3
@@ -9,5 +9,5 @@ LICENSE=abyss
RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi )
SLOT=0
SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=4c70cbdf60d5dc2d564272b103f2b469
diff --git a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 b/metadata/md5-cache/sci-biology/allpathslg-52488-r2
index d2822d296639..9a69383a8427 100644
--- a/metadata/md5-cache/sci-biology/allpathslg-52488-r2
+++ b/metadata/md5-cache/sci-biology/allpathslg-52488-r2
@@ -8,5 +8,5 @@ LICENSE=MIT
RDEPEND=!sci-biology/allpaths !sci-biology/vaal
SLOT=0
SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz https://dev.gentoo.org/~mgorny/dist/allpathslg-52488-patchset.tar.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8c8bda5ab2704db1e969660ebe5882c1
diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r3 b/metadata/md5-cache/sci-biology/amap-2.2-r3
index 870c1b4c2108..60c401df3a74 100644
--- a/metadata/md5-cache/sci-biology/amap-2.2-r3
+++ b/metadata/md5-cache/sci-biology/amap-2.2-r3
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 )
SLOT=0
SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=6bd792e8b76c06ee993b88f83e48b907
diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 b/metadata/md5-cache/sci-biology/amos-3.1.0-r4
index ef1bc7ca1cc4..a034bd77385e 100644
--- a/metadata/md5-cache/sci-biology/amos-3.1.0-r4
+++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r4
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=aec6d1c76d5ea621c66e803800e2b3c4
diff --git a/metadata/md5-cache/sci-biology/arb-6.0.6 b/metadata/md5-cache/sci-biology/arb-6.0.6
index 858db08d3f05..1c67d3874d28 100644
--- a/metadata/md5-cache/sci-biology/arb-6.0.6
+++ b/metadata/md5-cache/sci-biology/arb-6.0.6
@@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng:= media-libs/tiff:= www-client/lynx
RESTRICT=debug? ( test )
SLOT=0
SRC_URI=http://download.arb-home.de/release/arb-6.0.6/arb-6.0.6-source.tgz -> arb-6.0.6.tgz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=c13fb556a26877506fa69c3a46586bbd
diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r3 b/metadata/md5-cache/sci-biology/ariadne-1.3-r3
index ba40ba6ce4c6..b21b08025ae4 100644
--- a/metadata/md5-cache/sci-biology/ariadne-1.3-r3
+++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r3
@@ -9,5 +9,5 @@ LICENSE=ARIADNE
RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1
SLOT=0
SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=a99266aecef97d81f48df25aa43fbb4a
diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5
index 579e4ec0fd25..cffda556f734 100644
--- a/metadata/md5-cache/sci-biology/augustus-2.5.5
+++ b/metadata/md5-cache/sci-biology/augustus-2.5.5
@@ -7,5 +7,5 @@ KEYWORDS=amd64 x86
LICENSE=Artistic
SLOT=0
SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5660f556708e8c3b5d43c9ef832e66ec
diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.1 b/metadata/md5-cache/sci-biology/bamtools-2.5.1
index 3c302c0a9c12..81f5d5b1a05d 100644
--- a/metadata/md5-cache/sci-biology/bamtools-2.5.1
+++ b/metadata/md5-cache/sci-biology/bamtools-2.5.1
@@ -9,5 +9,5 @@ LICENSE=MIT
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/2.5.1
SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.1.tar.gz -> bamtools-2.5.1.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=2f7d6b2856395f0920d7b682b6bbad56
diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999
index 5974b4176513..15cc48d829bb 100644
--- a/metadata/md5-cache/sci-biology/bamtools-9999
+++ b/metadata/md5-cache/sci-biology/bamtools-9999
@@ -7,5 +7,5 @@ IUSE=static-libs
LICENSE=MIT
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/9999
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=2f7d6b2856395f0920d7b682b6bbad56
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.5 b/metadata/md5-cache/sci-biology/bcftools-1.5
index f75c5e03ace3..5acc345c6c5e 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.5
+++ b/metadata/md5-cache/sci-biology/bcftools-1.5
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5*:= sys-libs/zlib python_targets_pytho
REQUIRED_USE=|| ( python_targets_python2_7 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.5/bcftools-1.5.tar.bz2
-_eclasses_=multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=e289371e3fec376baf8fe36c652ca521
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0
index 54c0ae1bdb7f..d085e8059fc4 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.26.0
+++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz https://dev.gentoo.org/~mgorny/dist/bedtools-2.26.0-fix-buildsystem.patch.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=e072d90aa6492a70f261161c8d5551e5
diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a
index 811f608fc5be..e2a87820379e 100644
--- a/metadata/md5-cache/sci-biology/bfast-0.7.0a
+++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-perl/XML-Simple
SLOT=0
SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=abc362f15c5107d96bedfb879ea0375f
diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2
index e4c1b48d21ce..d408eea484c1 100644
--- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2
+++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf )
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=9731727dae2a2514bcaa486b0059272e
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4
index b90e9715a84c..f6d85f99c225 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.1.4
+++ b/metadata/md5-cache/sci-biology/biopandas-0.1.4
@@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=0cd8b2ce25811b0d0249bc4c771daa24
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.1 b/metadata/md5-cache/sci-biology/biopandas-0.2.1
index aad67aff9d1a..f3a6d5cbf0e2 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.2.1
+++ b/metadata/md5-cache/sci-biology/biopandas-0.2.1
@@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.1.tar.gz
-_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=ea88f22f7675491064ad08658a2ba291
diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9
index 87586d9f49d3..3761acf78f7c 100644
--- a/metadata/md5-cache/sci-biology/bioperl-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9
@@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr
REQUIRED_USE=minimal? ( !graphviz )
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=be22a76392a6e5c121e4b6d388045faa
diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1
index 4209e82fd701..570422cf863a 100644
--- a/metadata/md5-cache/sci-biology/bioperl-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1
@@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2
PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-db-9999 ) network? ( >=sci-biology/bioperl-network-9999 ) run? ( >=sci-biology/bioperl-run-9999 )
RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=210415961127105f0fc625670ba9e423
diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
index 1ba9e9b9dda9..ca23344baefe 100644
--- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=2470d7ecf1b6ff1902a8d74057748480
diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
index ff8c3cd9058b..1375decd6f30 100644
--- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
@@ -6,5 +6,5 @@ HOMEPAGE=http://www.bioperl.org/
LICENSE=Artistic GPL-2
RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=fd4229be06b3975302e9e37ca35601d2
diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
index 6312749fff68..d6d89cd23531 100644
--- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
@@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ )
RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=cb366a6a0c6cf3c12320c2d6d3551abe
diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
index a884579e5ad3..0d49a4549ef4 100644
--- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
@@ -7,5 +7,5 @@ IUSE=test
LICENSE=Artistic GPL-2
RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=025cd5fa89be402f3296160dbf755c8b
diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
index 59d16152f650..5a34d3713e7e 100644
--- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=9caec4e5b47cbf306a1689903f2a018a
diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
index b1c04373de54..6d10aa649db6 100644
--- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
@@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2
RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/XML-Twig dev-perl/IO-String dev-perl/IPC-Run ) dev-lang/perl:=[-build(-)]
RESTRICT=test
SLOT=0
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=26abe4f8477c1a1c22bd8515484ce1c1
diff --git a/metadata/md5-cache/sci-biology/biopython-1.68 b/metadata/md5-cache/sci-biology/biopython-1.68
index 0864d42d841f..ec38c1696eff 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.68
+++ b/metadata/md5-cache/sci-biology/biopython-1.68
@@ -10,5 +10,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target
REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 )
SLOT=0
SRC_URI=http://www.biopython.org/DIST/biopython-1.68.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=d27e2e9df832a55985e7f459f9e4fa81
diff --git a/metadata/md5-cache/sci-biology/bioruby-1.5.1 b/metadata/md5-cache/sci-biology/bioruby-1.5.1
index 943a70d107cd..d567b3651e74 100644
--- a/metadata/md5-cache/sci-biology/bioruby-1.5.1
+++ b/metadata/md5-cache/sci-biology/bioruby-1.5.1
@@ -10,5 +10,5 @@ RDEPEND=ruby_targets_ruby23? ( dev-ruby/libxml[ruby_targets_ruby23] ) ruby_targe
REQUIRED_USE=|| ( ruby_targets_ruby23 )
SLOT=0
SRC_URI=mirror://rubygems/bio-1.5.1.gem
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 ruby-fakegem cf1343b57e8029745950b4b147ff4d3a ruby-ng c1f44e746d7656dd6e02d8815ff9518a ruby-utils e5942a80e3c3b936c6b84d6dc4af9f9c toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 ruby-fakegem cf1343b57e8029745950b4b147ff4d3a ruby-ng c1f44e746d7656dd6e02d8815ff9518a ruby-utils e5942a80e3c3b936c6b84d6dc4af9f9c toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=86363a7bfb4b82d4d29cabbf3c45a28d
diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2
index b1798881731a..2aa445df6e0e 100644
--- a/metadata/md5-cache/sci-biology/blat-34-r2
+++ b/metadata/md5-cache/sci-biology/blat-34-r2
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=blat
SLOT=0
SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=d48361335699038107318f5ca57533e8
diff --git a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1
index e8720db11645..b05bc62be9c8 100644
--- a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1
+++ b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=sci-libs/gsl:= dev-libs/boost:= sci-biology/snpfile
SLOT=0
SRC_URI=http://www.daimi.au.dk/~mailund/Blossoc/download/blossoc-1.4.0.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=2fe1853c7621b633d2ee794ef3176e3f
diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
index 83e139f7a38c..d451d5be3727 100644
--- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
+++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
@@ -9,5 +9,5 @@ LICENSE=Artistic
RDEPEND=tbb? ( dev-cpp/tbb )
SLOT=1
SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=069dc133bc01cabadeda1e327034b7a7
diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9
index 8be8d4415901..596ecbe5f1c1 100644
--- a/metadata/md5-cache/sci-biology/bowtie-2.2.9
+++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb )
SLOT=2
SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=46d87c867cd445707dc1913cf3dd7eb6
diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.16a b/metadata/md5-cache/sci-biology/bwa-0.7.16a
index a873a30a3f85..6c12840b0085 100644
--- a/metadata/md5-cache/sci-biology/bwa-0.7.16a
+++ b/metadata/md5-cache/sci-biology/bwa-0.7.16a
@@ -7,5 +7,5 @@ LICENSE=GPL-3
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.16a.tar.bz2
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=b3702a6accf64398e32e84076031919b
diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
index 580c5539f184..15ce1ebf1aeb 100644
--- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6
+++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=bbe0ae10275a73485487e08f19f4ac1b
diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
index e862243a9673..60421f7f6f49 100644
--- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
+++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-libs/argtable
SLOT=0
SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=9ade45d2e283bc5fcc7eef16725e18ae
diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4
index 9f6ef0edc4c0..0f5075860b70 100644
--- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4
+++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4
@@ -6,5 +6,5 @@ KEYWORDS=alpha amd64 ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~spa
LICENSE=clustalw
SLOT=1
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=5c8ba46cd87128b1ddae72e6ca3d07db
diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
index 800f982eb0a6..3dd29b79c17f 100644
--- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
+++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=virtual/mpi
SLOT=0
SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=9e376a1d2ae782d9495b0c6c318aa097
diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3
index 6285cf8fa861..0b547a6fa778 100644
--- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3
+++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3
RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1
SLOT=0
SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=c8dbd602c40010526edb4955aa67e1b3
diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29
index bb6526a98b0d..a20fce331eb5 100644
--- a/metadata/md5-cache/sci-biology/consed-29
+++ b/metadata/md5-cache/sci-biology/consed-29
@@ -10,5 +10,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan
RESTRICT=fetch
SLOT=0
SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=d533d3bc63ad3989cce879478db9de97
diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2
index 2416e47dfc83..7bdafe2d2a89 100644
--- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2
+++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2
@@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.62.0:= python_targets
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=816b8cb2b88b4938d0bf5ea1db34170b
diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
index 42f52118a5af..d878223af019 100644
--- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
+++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=LGPL-2.1
SLOT=0
SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=b04d9beffea802bb82f896df101ca660
diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1
index 422031fcb346..2de24a31e2ce 100644
--- a/metadata/md5-cache/sci-biology/dialign2-2.2.1
+++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2.1
SLOT=0
SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=3761a69a47f38308f54ae0b051361ed6
diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4
index 6512fa13c9db..667c296b88aa 100644
--- a/metadata/md5-cache/sci-biology/diya-1.0_rc4
+++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal? ( sci-biology/mummer sci-biology/glimmer sci-biology/trnascan-se sci-biology/infernal ) dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5d4639d7c08c43e2c2208492508fd56c
diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1
index 5ce11c6ac9a6..fc69f3c5e708 100644
--- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1
+++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos
LICENSE=Artistic
SLOT=0
SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=dbee2f511488caf9eadadb20d043a2da
diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
index 6893d2dd7285..ce98a7d3600c 100644
--- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4166ba28131fdf70907b31300aa4c08b
diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
index 48de8711d933..9703dbd97ade 100644
--- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=ef491b452e56be12961f62b16961f4f1
diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
index cdfdc0e394cb..b97765edc0c7 100644
--- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0
diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
index 341ba6fa09aa..760f80714b50 100644
--- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=9f8b2caa273f4ae3b0463e6de6782660
diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
index feb6b0ecf7de..e31806b0b3a7 100644
--- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=920906439fbc5278460201b23a615736
diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
index 6968f13d6d8e..5648ce3ba64b 100644
--- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
+++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=d82c7c44ec76fa5d6165769a73e5df9a
diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
index 05b6e0ebf971..b9ef5c2196c6 100644
--- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=1b156bed7ea031aeb5464836dd987f18
diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
index 6482af08ff73..b667f48988a5 100644
--- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz
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diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
index 91382f3e6ca2..facec7113b7f 100644
--- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz
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diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
index 8bd4cbdb7beb..0ee92cbbef9b 100644
--- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
+++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz
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_md5_=b18db6d7a2159272c7b69d34a14dc9b5
diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
index 60dc824f295f..4d25aa0ef320 100644
--- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=84df94b7c4b0f044de45cef524cbf453
diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
index bba33a18cfa5..73ea600bb048 100644
--- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
+++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 freedist
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=00620d36fbf4790dc2ecfb240ba9816c
diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
index 8b6b822e46b6..15d978260553 100644
--- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4cb685046b5a39b624eb3467b815c2c4
diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
index 28c1ba9e9667..a3e5485c5870 100644
--- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=634d624be78f958ed7fca02e7dc43bd4
diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
index c46689ec1f05..c2fca281e0a6 100644
--- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=e50220ee11093554b589c1f9f53e7c09
diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
index 664ec905227a..c5e8a01a56be 100644
--- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=d257de40bcdb33c0735daac8a5f15fda
diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
index 6f716806781b..a85da795da6b 100644
--- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
+++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
@@ -10,5 +10,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci
RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=99a47266a2a8f2fd0a874111491146e2
diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d
index 14605479292f..a4a39ab6eae2 100644
--- a/metadata/md5-cache/sci-biology/eugene-4.1d
+++ b/metadata/md5-cache/sci-biology/eugene-4.1d
@@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0=
RESTRICT=test
SLOT=0
SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=683d1e7f9daeda6cd20b92117330ea81
diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
index 6765e017d73c..001a128ced90 100644
--- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
+++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
@@ -10,5 +10,5 @@ RDEPEND=dev-libs/glib:2
REQUIRED_USE=test? ( utils )
SLOT=0
SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=2efd53d13e6f08e4144477038f41e4af
diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1
index d0917a4b8527..51ad4b54e546 100644
--- a/metadata/md5-cache/sci-biology/express-0.9.5-r1
+++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1
@@ -8,5 +8,5 @@ LICENSE=Artistic
RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools
SLOT=0
SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=6d15a446bfc7659cceaabe3567001583
diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1
index b08b0731e036..dc306f6344f9 100644
--- a/metadata/md5-cache/sci-biology/express-1.5.1
+++ b/metadata/md5-cache/sci-biology/express-1.5.1
@@ -8,5 +8,5 @@ LICENSE=Artistic
RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sys-libs/zlib sci-biology/bamtools
SLOT=0
SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=a2d4ea80b964801c45f62ae737430d6d
diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e
index 04cfb987310b..c84e5f5e6288 100644
--- a/metadata/md5-cache/sci-biology/fasta-36.3.5e
+++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=fasta
SLOT=0
SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=7b46f81d2659e9120c49874e774b5ca0
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7
index c0324cf7821e..d14150eca631 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.7
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7
@@ -9,5 +9,5 @@ LICENSE=GPL-2
REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
SLOT=0
SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=20d72299931c8f8e092006a9b668182c
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8
index 256a8b22e442..dd27366bb2ec 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.8
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8
@@ -9,5 +9,5 @@ LICENSE=GPL-2
REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
SLOT=0
SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=f2b648d93a4c0ca58285574958cde15a
diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
index ad19abcef4d6..a3ce0a1ffa8a 100644
--- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
+++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
@@ -8,5 +8,5 @@ LICENSE=AGPL-3
RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot
SLOT=0
SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=c3bb0edd6b01a31019cf5fd59e22122a
diff --git a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
index e6f92cbc68cd..628a03830ce3 100644
--- a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
+++ b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=finchtv
SLOT=0
SRC_URI=http://www.geospiza.com/finchtv/download/programs/linux/finchtv_1_3_1.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=08355830f28d1052c2ab527b82a8dd68
diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r3 b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r3
index 78786ad3a20f..6b42441931fe 100644
--- a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r3
+++ b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r3
@@ -9,5 +9,5 @@ RDEPEND=app-arch/bzip2 sys-devel/gcc sys-libs/glibc sys-libs/zlib
RESTRICT=mirror bindist strip
SLOT=0
SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.4/fahclient_7.4.4-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.4/fahclient_7.4.4-64bit-release.tar.bz2 )
-_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 97f470f374f2e94ccab04a2fb21d811e systemd a31844b675f1a1fea87fbe1144aee5f5 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 user 8bc2845510e2109af75e3eeac607ec81 versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 97f470f374f2e94ccab04a2fb21d811e systemd a31844b675f1a1fea87fbe1144aee5f5 toolchain-funcs fa02994d0beba88681127d93da4411ec user 8bc2845510e2109af75e3eeac607ec81 versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=88985dd852d9319fa9869bece9f35a26
diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4
index cda92a684a4d..1975a8e0ee01 100644
--- a/metadata/md5-cache/sci-biology/gatk-2.4
+++ b/metadata/md5-cache/sci-biology/gatk-2.4
@@ -9,5 +9,5 @@ LICENSE=MIT
RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3
SLOT=0
SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot 3be1ab44131e8c0bbdaa75823008444b versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot 3be1ab44131e8c0bbdaa75823008444b versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=8afea474ed6c1f4ad5ac6d6a18c49542
diff --git a/metadata/md5-cache/sci-biology/gatk-9999 b/metadata/md5-cache/sci-biology/gatk-9999
index 0c29de25fbc7..9781a08d4679 100644
--- a/metadata/md5-cache/sci-biology/gatk-9999
+++ b/metadata/md5-cache/sci-biology/gatk-9999
@@ -7,5 +7,5 @@ IUSE=elibc_FreeBSD elibc_FreeBSD
LICENSE=MIT
RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3
SLOT=0
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 git-2 45ff482316b52b3f96ff6b7309b77f03 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=df4fa840e567320d0f100f0073200f23
diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1
index 6432fc83c577..e0ce24addbca 100644
--- a/metadata/md5-cache/sci-biology/gibbs-3.1
+++ b/metadata/md5-cache/sci-biology/gibbs-3.1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 )
SLOT=0
SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=e28918ff8ca46c8b8254e4e36f8d0bcf
diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3
index 05798b276faf..843dc56f0e06 100644
--- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3
+++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3
@@ -7,5 +7,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh
SLOT=0
SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=fda3f095f34da47d12e170b3c40dfd67
diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b
index bd310ec41806..e4223fafef93 100644
--- a/metadata/md5-cache/sci-biology/glimmer-3.02b
+++ b/metadata/md5-cache/sci-biology/glimmer-3.02b
@@ -7,5 +7,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh sci-biology/elph
SLOT=0
SRC_URI=http://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1a77df881e0fba38094c344e97b529a5
diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
index b2cb07740449..c7207e9ac8f7 100644
--- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
+++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=Artistic
SLOT=0
SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=addae30e588a0c7a05baea53d553af0f
diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1
index b96d3def7666..4007d9ca2f0e 100644
--- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1
+++ b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3
RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.7.3 ) >=dev-java/java-config-2.2.0-r3
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=d8bbf59f45f0b32b55de88f3c5233883
diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1
index dd0ec4d489de..5177ffda2508 100644
--- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1
+++ b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3
RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.8.1 ) >=dev-java/java-config-2.2.0-r3
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=d8bbf59f45f0b32b55de88f3c5233883
diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3
index ebfeff45d6ac..cb27ec14b92c 100644
--- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3
+++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-cpp.zip
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=62b1fc794a90a87e0f80ab795108ee3c
diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1
index 3e607b4f5c6f..88bdf429d3e7 100644
--- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1
+++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-cpp.zip
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=2599766d541e65f4acfb94c4fa4e974e
diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1
index bc46f94e0749..f5909769a88e 100644
--- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1
+++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip https://dev.gentoo.org/~mgorny/dist/goby-cpp-2.0.1-files.tar.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8282c100b202c470aedc98e37f6151ff
diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1
index 53b5612fdeb7..0ec949450c7b 100644
--- a/metadata/md5-cache/sci-biology/iedera-1.05-r1
+++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=ce77e1e27bd52fed2fd2af52744d6288
diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2
index 3443078d29fe..bd42f404cc94 100644
--- a/metadata/md5-cache/sci-biology/kalign-2.03-r2
+++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=175d26382226c7bed2b44be485b01d01
diff --git a/metadata/md5-cache/sci-biology/kallisto-0.43.1 b/metadata/md5-cache/sci-biology/kallisto-0.43.1
index de2872ac57eb..682ead721a37 100644
--- a/metadata/md5-cache/sci-biology/kallisto-0.43.1
+++ b/metadata/md5-cache/sci-biology/kallisto-0.43.1
@@ -8,5 +8,5 @@ LICENSE=BSD
RDEPEND=sci-libs/hdf5:= sys-libs/zlib:=
SLOT=0
SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz -> kallisto-0.43.1.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=b5fc562bf49e70db44b86bc5702ae9f2
diff --git a/metadata/md5-cache/sci-biology/kallisto-9999 b/metadata/md5-cache/sci-biology/kallisto-9999
index 5dba4f3dd38c..85afffcf4d78 100644
--- a/metadata/md5-cache/sci-biology/kallisto-9999
+++ b/metadata/md5-cache/sci-biology/kallisto-9999
@@ -6,5 +6,5 @@ HOMEPAGE=http://pachterlab.github.io/kallisto/
LICENSE=BSD
RDEPEND=sci-libs/hdf5:= sys-libs/zlib:=
SLOT=0
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=b5fc562bf49e70db44b86bc5702ae9f2
diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r3 b/metadata/md5-cache/sci-biology/lagan-2.0-r3
index bb8c4af187d9..011b85c9889d 100644
--- a/metadata/md5-cache/sci-biology/lagan-2.0-r3
+++ b/metadata/md5-cache/sci-biology/lagan-2.0-r3
@@ -7,5 +7,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=c9dbddd6a22f2e20ff25d0aa1e6f4280
diff --git a/metadata/md5-cache/sci-biology/last-230 b/metadata/md5-cache/sci-biology/last-230
index df300c82416d..a6fc58b454ae 100644
--- a/metadata/md5-cache/sci-biology/last-230
+++ b/metadata/md5-cache/sci-biology/last-230
@@ -7,5 +7,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-3
SLOT=0
SRC_URI=http://last.cbrc.jp/archive/last-230.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5da658e6779591b0d1b9ad3413a0e7b2
diff --git a/metadata/md5-cache/sci-biology/last-299-r1 b/metadata/md5-cache/sci-biology/last-299-r1
index 96663d3934e7..09c44a477231 100644
--- a/metadata/md5-cache/sci-biology/last-299-r1
+++ b/metadata/md5-cache/sci-biology/last-299-r1
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=http://last.cbrc.jp/last-299.zip
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=ec5206661373a6ef6ad77450dfbdb915
diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
index a5521f458d6f..3bc6d62afa5f 100644
--- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
+++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=AGPL-3
SLOT=0/0
SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=867c9b9e4eee26ad2a76ff6ff0594f52
diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050
index fe45e160e9f6..43c9ceb9f18a 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.050
+++ b/metadata/md5-cache/sci-biology/mafft-7.050
@@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=BSD
SLOT=0
SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=10435da51da43a9bd92e9e337fb92445
diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215
index 67ab9e5cb03a..b3056161a6a3 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.215
+++ b/metadata/md5-cache/sci-biology/mafft-7.215
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=BSD
SLOT=0
SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=26a81f4b6b0ff69fbc3eba8869681491
diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305
index c7a5796cdda2..29a6530ae474 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.305
+++ b/metadata/md5-cache/sci-biology/mafft-7.305
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=BSD
SLOT=0
SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4701ed0cbf5fff28c6de7c8b01e134af
diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2
index ee43af70c679..080b7a688b9e 100644
--- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2
+++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=sys-libs/zlib
SLOT=0
SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=39ffb0025210075a8d7d7f6f81f8da56
diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
index ddfa6381557e..ddfa93a7620f 100644
--- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
+++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq
SLOT=0
SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=dee50558d10e75ff9e96f4c3f177c55f
diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312
index 354b51b0bc69..b8cac900a307 100644
--- a/metadata/md5-cache/sci-biology/mcl-08.312
+++ b/metadata/md5-cache/sci-biology/mcl-08.312
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=24cf3aad7375304f2721048d2f76b5f1
diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135
index 44e2ea47bec2..e7db8170fe90 100644
--- a/metadata/md5-cache/sci-biology/mcl-12.135
+++ b/metadata/md5-cache/sci-biology/mcl-12.135
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=24cf3aad7375304f2721048d2f76b5f1
diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137
index 2d84e6c46bd0..790770c8321f 100644
--- a/metadata/md5-cache/sci-biology/mcl-14.137
+++ b/metadata/md5-cache/sci-biology/mcl-14.137
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=3429c68609b6c70e047d577379f68f97
diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2
index 44dd58f5a29a..9ebba34ac07e 100644
--- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2
+++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=a4080439675628436c06de8db9f59c6e
diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2
index a87030848061..dcb5fbee46e0 100644
--- a/metadata/md5-cache/sci-biology/mira-4.0.2
+++ b/metadata/md5-cache/sci-biology/mira-4.0.2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-libs/boost[threads] dev-util/google-perftools
SLOT=0
SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4e9fc8a550640febbc0b71544c16618c
diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30
index eec1c994f0f6..9d16bde41e6b 100644
--- a/metadata/md5-cache/sci-biology/mosaik-2.2.30
+++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot 3be1ab44131e8c0bbdaa75823008444b
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot 3be1ab44131e8c0bbdaa75823008444b
_md5_=630686b35f8a549c580c5fd0e2cb02fc
diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
index 84eb90a8ab3d..4abca291abd7 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
+++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran
SLOT=0
SRC_URI=http://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=abcc03749068210ba5c44ba0b4a85e27
diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1
index 486213f9eae5..64232396943f 100644
--- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1
+++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/ncurses mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 )
SLOT=0
SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=a082c9b1f1b5f9fa9b85e23eb7009a6d
diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
index 136ad77782c8..b05a8d03e240 100644
--- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
+++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0= )
SLOT=0
SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=a944448f568e57bb9f221cd1f437ab09
diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23
index 2936bb69d820..72695d1244ed 100644
--- a/metadata/md5-cache/sci-biology/mummer-3.23
+++ b/metadata/md5-cache/sci-biology/mummer-3.23
@@ -8,5 +8,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh dev-lang/perl
SLOT=0
SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=c256f298b416306c1be7005e7877f7b9
diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31
index 7e26d0a08a0e..fa541b51b673 100644
--- a/metadata/md5-cache/sci-biology/muscle-3.8.31
+++ b/metadata/md5-cache/sci-biology/muscle-3.8.31
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=!sci-libs/libmuscle
SLOT=0
SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=500ff424aff8c56744362bc87a3ff285
diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
index 8e3d114f0bc6..157ec8d46fbd 100644
--- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
+++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt )
SLOT=0
SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=770169ddfbcde7c5fbe57bff9b10ca14
diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2
index 3c0acf31c176..ec96b1c72405 100644
--- a/metadata/md5-cache/sci-biology/njplot-2.3-r2
+++ b/metadata/md5-cache/sci-biology/njplot-2.3-r2
@@ -8,5 +8,5 @@ LICENSE=public-domain
RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=c70b49c7f5e1a92f5169df372f9638c6
diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1
index f2c11ae38e64..a491408a974d 100644
--- a/metadata/md5-cache/sci-biology/pals-1.0-r1
+++ b/metadata/md5-cache/sci-biology/pals-1.0-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=public-domain
SLOT=0
SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=b0df20d47905df6a290c5fe2f79fd48b
diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1
index 881795c2ec0a..c6d5ceecbfba 100644
--- a/metadata/md5-cache/sci-biology/paml-4.4c-r1
+++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=free-noncomm
SLOT=0
SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz
-_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=c46d709378282d4ccbb567aaa00ee01a
diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2
index 8cc88ef4671a..89a2aab4f9e0 100644
--- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2
+++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2
@@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl dev-perl/Tk
RESTRICT=fetch
SLOT=0
SRC_URI=phrap-1.080812-distrib.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=e72f3e08accb23ebf55562689dad5f46
diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1
index cbdcc1a742a4..21092d8c0aad 100644
--- a/metadata/md5-cache/sci-biology/phred-071220-r1
+++ b/metadata/md5-cache/sci-biology/phred-071220-r1
@@ -7,5 +7,5 @@ LICENSE=phrap
RESTRICT=fetch
SLOT=0
SRC_URI=phred-dist-071220.b-acd.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=92065ca72fd55796ea38e3d5ae9ee8b8
diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1
index 503c559acbe8..691628d91a07 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.69-r1
+++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1
@@ -8,5 +8,5 @@ LICENSE=freedist
RDEPEND=x11-libs/libXaw
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=e38b117238f85d8861b4bb7d82c617d2
diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1
index 918eee813efb..b8dc5b1d4154 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.696-r1
+++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1
@@ -8,5 +8,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=974f8dc4ee6875c5d84eba7b501bf02a
diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r2 b/metadata/md5-cache/sci-biology/phylip-3.696-r2
index 60ec0662da3f..3096b4dface5 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.696-r2
+++ b/metadata/md5-cache/sci-biology/phylip-3.696-r2
@@ -8,5 +8,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw !!dev-lang/elixir
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=5200e46211c78c881415665a01613d54
diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
index b32c12a0fa2b..caa143129a91 100644
--- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
+++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
@@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=fcca6fb4f9e88f5eb6a63a3ee0c79df7
diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103
index ed98dcaa15b9..4bf310959ac6 100644
--- a/metadata/md5-cache/sci-biology/picard-1.103
+++ b/metadata/md5-cache/sci-biology/picard-1.103
@@ -9,5 +9,5 @@ LICENSE=Apache-2.0
RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons-jexl:2 dev-java/ant-core:0 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
SLOT=0
SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 java-ant-2 ea15ab9e838d1062abd6b53de2045d50 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 0ee72667014428e01a01df2345244cf3 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=09627e6bb74ee9997324bde01a56bcbd
diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1
index f386de15ed18..ffa2d597425c 100644
--- a/metadata/md5-cache/sci-biology/piler-1.0-r1
+++ b/metadata/md5-cache/sci-biology/piler-1.0-r1
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals
SLOT=0
SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=7b5a6d618aac08240cf165a04509c319
diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1
index ff1de1c02eac..36224a16eca6 100644
--- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1
+++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=public-domain
SLOT=0
SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=d9f7901d3776c424cfb93782cc6ddafa
diff --git a/metadata/md5-cache/sci-biology/plink-1.07-r1 b/metadata/md5-cache/sci-biology/plink-1.07-r1
index 628626f3c331..14a4fea4d121 100644
--- a/metadata/md5-cache/sci-biology/plink-1.07-r1
+++ b/metadata/md5-cache/sci-biology/plink-1.07-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib lapack? ( virtual/lapack )
SLOT=0
SRC_URI=http://pngu.mgh.harvard.edu/~purcell/plink/dist/plink-1.07-src.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=b659cc5ab8af123ceaf15f1349214345
diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514
index a59b53727653..b89da127d296 100644
--- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514
+++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack
SLOT=0
SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=570249dc23feeff7b47b3e81df358196
diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1
index f92042f71464..2561be648993 100644
--- a/metadata/md5-cache/sci-biology/poa-2-r1
+++ b/metadata/md5-cache/sci-biology/poa-2-r1
@@ -7,5 +7,5 @@ KEYWORDS=~x86 ~amd64
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4f0b8d6c2192465644af4890a995d48a
diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603
index 9ed78cefc4c9..b80d59e24b30 100644
--- a/metadata/md5-cache/sci-biology/prank-140603
+++ b/metadata/md5-cache/sci-biology/prank-140603
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-3
SLOT=0
SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=17023476000980284365a9c0ed04a6f0
diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7
index ff1358255e33..29ddd2f55240 100644
--- a/metadata/md5-cache/sci-biology/primer3-2.3.7
+++ b/metadata/md5-cache/sci-biology/primer3-2.3.7
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=e79ee4774138e651c83467c2b2cb2926
diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1
index 1c6a3e417b66..ddf618c8d353 100644
--- a/metadata/md5-cache/sci-biology/probcons-1.12-r1
+++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot
SLOT=0
SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=19a24bd3c543d599d5b3392e66b7022e
diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3
index ff310e96fbee..62c22ea47ff8 100644
--- a/metadata/md5-cache/sci-biology/prodigal-2.6.3
+++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3
@@ -6,5 +6,5 @@ KEYWORDS=~amd64
LICENSE=GPL-3
SLOT=0
SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=9cea3bcc55e864076d7e4b542f657f96
diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39
index 7067c9cae9cd..5628d5c21ced 100644
--- a/metadata/md5-cache/sci-biology/profphd-1.0.39
+++ b/metadata/md5-cache/sci-biology/profphd-1.0.39
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils
SLOT=0
SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8e866cc812e134cdc7a7837e5b60aa21
diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40
index 584f353d8f8f..08deb82a6406 100644
--- a/metadata/md5-cache/sci-biology/profphd-1.0.40
+++ b/metadata/md5-cache/sci-biology/profphd-1.0.40
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils
SLOT=0
SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=b641a6cfd444fa4b83d5963246948636
diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1
index 60776e2fe658..054024d0a8f1 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.2.1
+++ b/metadata/md5-cache/sci-biology/psipred-3.2.1
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=bf7aa50ff789d669fe4846e0e41828d7
diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3
index 37ae39beded9..7098b9505d28 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.3
+++ b/metadata/md5-cache/sci-biology/psipred-3.3
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=d719359ecbbd5c0825e93788cc4f0af1
diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4
index 8bc535a9b11d..a3b7d06c81c7 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.4
+++ b/metadata/md5-cache/sci-biology/psipred-3.4
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=671e20dbd509ebdd9e9c492e2c53b6a1
diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5
index e80a5cfa7e12..8c67b08100ef 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.5
+++ b/metadata/md5-cache/sci-biology/psipred-3.5
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=671e20dbd509ebdd9e9c492e2c53b6a1
diff --git a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 b/metadata/md5-cache/sci-biology/pysam-0.12.0.1
index 1c27069f1c19..b1f595a09ff6 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.12.0.1
+++ b/metadata/md5-cache/sci-biology/pysam-0.12.0.1
@@ -10,5 +10,5 @@ RDEPEND==sci-libs/htslib-1.5*:= python_targets_python2_7? ( >=dev-lang/python-2.
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/p/pysam/pysam-0.12.0.1.tar.gz
-_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=distutils-r1 c25bafd988acc946bfa457eac09621d8 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=c02049dd445007999f7534a8e5d17656
diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
index afc13c4ac903..40ab802ba930 100644
--- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
+++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl sci-biology/hmmer:2
SLOT=0
SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=0fc8dac0f54d22c60da996470b3b33ee
diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6
index c5ffa0d621b6..89316a774098 100644
--- a/metadata/md5-cache/sci-biology/raxml-7.2.6
+++ b/metadata/md5-cache/sci-biology/raxml-7.2.6
@@ -8,5 +8,5 @@ LICENSE=GPL-2
REQUIRED_USE=cpu_flags_x86_sse3
SLOT=0
SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=f2b8e0b4e5701d9b20bcbf9151c9b868
diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08
index 425ce6cadd6c..add65eda5022 100644
--- a/metadata/md5-cache/sci-biology/recon-1.08
+++ b/metadata/md5-cache/sci-biology/recon-1.08
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=2ddd537d912c7c88b6f0b0d203a51613
diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1
index 7fa11201ae27..bb6bc420e551 100644
--- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1
+++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1
@@ -8,5 +8,5 @@ LICENSE=OSL-2.1
RDEPEND=dev-libs/boost
SLOT=0
SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz https://dev.gentoo.org/~mgorny/dist/rmblast-1.2-gcc47.patch.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1283e94bf3a231a794a498d2769aaa7d
diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4
index 5880a69c717d..042fa0199230 100644
--- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4
+++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=public-domain
SLOT=0
SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=788c156d45287bef4f6aa876055bde4c
diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
index 6e5c004f4b48..46143ff21d5e 100644
--- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
+++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0.1-legacy
SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=fa48f0b2be780a9264eb9d727ec53335
diff --git a/metadata/md5-cache/sci-biology/samtools-1.5 b/metadata/md5-cache/sci-biology/samtools-1.5
index 2e1f76e2ab9e..877ce0a522bd 100644
--- a/metadata/md5-cache/sci-biology/samtools-1.5
+++ b/metadata/md5-cache/sci-biology/samtools-1.5
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib py
REQUIRED_USE=|| ( python_targets_python2_7 )
SLOT=0
SRC_URI=mirror://sourceforge/samtools/samtools-1.5.tar.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=8d92b4a814f62eab87bac2be22c2470c
diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5
index bfdd04e64bf7..0ae10ea0ceb4 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.3.5
+++ b/metadata/md5-cache/sci-biology/seaview-4.3.5
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=38cc02682d853c813df2b6e81cbb51c5
diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4
index 01000e766ac1..d1c5185228d6 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.5.4
+++ b/metadata/md5-cache/sci-biology/seaview-4.5.4
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=38cc02682d853c813df2b6e81cbb51c5
diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6
index 50879b86f2df..8db8ec1b4fb0 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.6
+++ b/metadata/md5-cache/sci-biology/seaview-4.6
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw:2 || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1a6723f1ab0e67cc0d63dd54a902900f
diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
index 20ba60eef3d2..801c7081d45c 100644
--- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
+++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=1.4
SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=b6c214312349c09a0fe901e8d0235a32
diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
index a956e22c5075..2c333e1d86d2 100644
--- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
+++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seqan
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=0a4cc55d3cd27897618671fdafc13e2f
diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0 b/metadata/md5-cache/sci-biology/seqan-2.4.0
index fe68621990ba..377b11b1e9c6 100644
--- a/metadata/md5-cache/sci-biology/seqan-2.4.0
+++ b/metadata/md5-cache/sci-biology/seqan-2.4.0
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/s
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=ca34cde2b2fc2f8692469a016bc077f6
diff --git a/metadata/md5-cache/sci-biology/seqan-9999 b/metadata/md5-cache/sci-biology/seqan-9999
index 21798f7d85e7..2bddb42d041a 100644
--- a/metadata/md5-cache/sci-biology/seqan-9999
+++ b/metadata/md5-cache/sci-biology/seqan-9999
@@ -8,5 +8,5 @@ LICENSE=BSD GPL-3
RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 25b08efef07cea6bcd45b8c6dcce2782 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=954c2a9b05e60f6a61eb27c1cc720117
diff --git a/metadata/md5-cache/sci-biology/shrimp-2.0.1 b/metadata/md5-cache/sci-biology/shrimp-2.0.1
index ebbc3333129a..de5fcb003b89 100644
--- a/metadata/md5-cache/sci-biology/shrimp-2.0.1
+++ b/metadata/md5-cache/sci-biology/shrimp-2.0.1
@@ -9,5 +9,5 @@ LICENSE=shrimp
RDEPEND=!sci-biology/emboss !sci-mathematics/cado-nfs
SLOT=0
SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_0_1.src.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=33caa30e4cdcb3e86f4b1be8c6c30c46
diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3
index 2752a9d14065..c0d93ac37427 100644
--- a/metadata/md5-cache/sci-biology/shrimp-2.2.3
+++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3
@@ -10,5 +10,5 @@ RDEPEND=!sci-mathematics/cado-nfs python_targets_python2_7? ( >=dev-lang/python-
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=98a7a2b9765ad5e245b1b7b9be67060b
diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20
index 64d6efa49416..6cd0bcc34f66 100644
--- a/metadata/md5-cache/sci-biology/sibsim4-0.20
+++ b/metadata/md5-cache/sci-biology/sibsim4-0.20
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=84a29c8972011ec4b86f3c8235a7b5d2
diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2
index 0314de9b6993..ca996e855f6d 100644
--- a/metadata/md5-cache/sci-biology/sim4-20030921-r2
+++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~ppc ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://globin.cse.psu.edu/ftp/dist/sim4/sim4.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=fca00baca723bafd7976eff8dccc5c26
diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2
index f6ceec1d243a..176df067b168 100644
--- a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2
+++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=dev-libs/boost:=
SLOT=0
SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=7c64014825a157024d03614c037abcfc
diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1
index 8dc332f93e3a..9c6dcfa4eb2c 100644
--- a/metadata/md5-cache/sci-biology/stride-20011129-r1
+++ b/metadata/md5-cache/sci-biology/stride-20011129-r1
@@ -7,5 +7,5 @@ LICENSE=STRIDE
RESTRICT=mirror bindist
SLOT=0
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=d73db26f06440dc2c2a1e25befe5d490
diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
index 73676e788857..610fdd0e6b46 100644
--- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
+++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
@@ -7,5 +7,5 @@ LICENSE=GPL-2
RDEPEND=sci-biology/clustalw sci-chemistry/tm-align
SLOT=0
SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=5c54b109c5b8bef93adbc5f99ddd7114
diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4
index d4515b6c9e8a..66995e9fc59c 100644
--- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4
+++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=efee8069c83c578acac8e57b429ad985
diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2
index f8f26cf2cc15..c07404cd2a22 100644
--- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2
+++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2
@@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi )
RESTRICT=test
SLOT=0
SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=6f933fde60eb23f0e50fbe5e137bbc7e
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
index 8445bed0b017..1d7bb520b0c2 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/wxGTK:3.0[X]
SLOT=0
SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets 04e063b0eff26daaea83d859dd9d6e05
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets 04e063b0eff26daaea83d859dd9d6e05
_md5_=ce129f3e61a849cfd3654e5a9fa4b17a
diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31
index 98c9ce624762..06a929f0376f 100644
--- a/metadata/md5-cache/sci-biology/trnascan-se-1.31
+++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz
-_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=3f4bcdf31fe276f90a95e2f4b311deae
diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40
index 4d11ff3b0bea..8897384fcac9 100644
--- a/metadata/md5-cache/sci-biology/uchime-4.2.40
+++ b/metadata/md5-cache/sci-biology/uchime-4.2.40
@@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
LICENSE=public-domain
SLOT=0
SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz
-_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=cmake-utils d2f8cff68b90b869ef9d460c6f3c4e2e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=6adcbb8c658bdc3c40f797c61f5c58b0
diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260
index 19a21842e789..3598b5788357 100644
--- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260
+++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260
@@ -10,5 +10,5 @@ RDEPEND=app-arch/unzip !<sci-biology/ucsc-genome-browser-223 mysql? ( virtual/my
REQUIRED_USE=server? ( mysql )
SLOT=0
SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp a76ebd3cb5649737496e8238992dd7ca
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp a76ebd3cb5649737496e8238992dd7ca
_md5_=e8bc8c4496d6c751b8f8452324e059f4
diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1
index c2acb2ce0ec7..e229e838cd20 100644
--- a/metadata/md5-cache/sci-biology/unafold-3.8-r1
+++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=unafold
SLOT=0
SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=f6e357557efc2f86eab0adadd32142ce
diff --git a/metadata/md5-cache/sci-biology/vaal-46233-r2 b/metadata/md5-cache/sci-biology/vaal-46233-r2
index a16fe90423df..73b5ca039c93 100644
--- a/metadata/md5-cache/sci-biology/vaal-46233-r2
+++ b/metadata/md5-cache/sci-biology/vaal-46233-r2
@@ -9,5 +9,5 @@ LICENSE=Whitehead-MIT
RDEPEND=!sci-biology/allpaths !sci-biology/allpathslg
SLOT=0
SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc https://dev.gentoo.org/~mgorny/dist/vaal-46233_remove-namespace-std.patch.bz2
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=7ca22b906d6f7e7c4fe2f2f35eedfb6b
diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14
index 48df3b7b40cf..57ab96138f63 100644
--- a/metadata/md5-cache/sci-biology/vcftools-0.1.14
+++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14
@@ -9,5 +9,5 @@ LICENSE=LGPL-3
RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack )
SLOT=0
SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=c40169dc993f3444a3e2f41ad69a920d
diff --git a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1
index db350f991b5b..3c4506c95ab9 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1
+++ b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib
SLOT=0
SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.0.18.tgz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=89c605a4c416ef8207f85201e0494734
diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10
index fccd1230630d..49295e1e9891 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.2.10
+++ b/metadata/md5-cache/sci-biology/velvet-1.2.10
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=b46e328f5bece618fd1f41cde92b68c0
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
index 1e32714f0aa4..68fd2678eec4 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=1e58c830b49ced05ae9960fcc2dead13
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
index 10adddc104e5..79fc0f195d33 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 c25bafd988acc946bfa457eac09621d8 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25
_md5_=b2a6486af275e75c6365ab7eeba1e0bd
diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1
index 1a8e1ed7377b..9d697077c990 100644
--- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1
+++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl
SLOT=0
SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=6ebc94c9eb0083edd0308af8a336afe0
diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
index 11d0431acc15..ceef98c721c5 100644
--- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
+++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=net-libs/libtirpc x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl
SLOT=0
SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=a8a806da02a9f269cc580e3560e5a038
diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
index b0e23e627d2d..d0d857a3c2c7 100644
--- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
+++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
@@ -9,5 +9,5 @@ LICENSE=BSD
RDEPEND=~sci-biology/hmmer-2.3.2
SLOT=0
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2
-_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
+_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72
_md5_=5089373e8fa38f080134e22ddf59264c
diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2
index 98e95d79fe90..373b73c71abd 100644
--- a/metadata/md5-cache/sci-biology/yass-1.14-r2
+++ b/metadata/md5-cache/sci-biology/yass-1.14-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dmalloc? ( dev-libs/dmalloc )
SLOT=0
SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz
-_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 885c7d8dd70a58825f3d17e35a3cd1e9
+_eclasses_=autotools 4842e626555a9a4344f34cef2e190b67 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec
_md5_=3a4ba9b4e7b8efec51cfc79d261fefd3