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# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
PYTHON_COMPAT=( python2_7 )
inherit eutils python-r1
DESCRIPTION="GUI for MSMS and displaying its results in PyMOL"
HOMEPAGE="http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html"
SRC_URI="http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/pymol_script/msms_pymol.py -> ${P}.py"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
LICENSE="BSD pymol"
IUSE=""
REQUIRED_USE="${PYTHON_REQUIRED_USE}"
RDEPEND="
${PYTHON_DEPS}
sci-chemistry/msms-bin
sci-chemistry/pymol[${PYTHON_USEDEP}]"
DEPEND="${RDEPEND}"
src_unpack() {
mkdir "${S}" || die
cp "${DISTDIR}"/${A} "${S}/" || die
}
src_prepare() {
epatch "${FILESDIR}"/${PV}-msms.patch
sed \
-e "s:GENTOOMSMS:${EPREFIX}/opt/bin/msms:g" \
-e "s:GENTOOXYZRN:${EPREFIX}/usr/bin/pdb_to_xyzrn:g" \
-i ${A} || die
}
src_install() {
python_moduleinto pmg_tk/startup
python_foreach_impl python_domodule ${P}.py
python_foreach_impl python_optimize
}
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