blob: f9425f749a99c40d4e49e799ad472cc104ec5c6b (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
|
# Copyright 1999-2025 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
inherit desktop toolchain-funcs flag-o-matic
MY_PV="${PV/_p/.}.0"
MY_P="${PN}-${MY_PV}"
DESCRIPTION="Publication-quality molecular visualization package"
# Original page dead
#HOMEPAGE="http://hugin.ethz.ch/wuthrich/software/molmol/index.html"
HOMEPAGE="
http://www.csb.yale.edu/userguides/graphics/molmol/molmol_descrip.html
http://pjf.net/science/molmol.html
"
SRC_URI="
ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/${MY_P}-src.tar.gz
ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/${MY_P}-doc.tar.gz
https://dev.gentoo.org/~soap/distfiles/${PN}-patches.tbz2
https://dev.gentoo.org/~pacho/${PN}/${PN}_256.png
"
S="${WORKDIR}"
LICENSE="molmol"
SLOT="0"
KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
RDEPEND="
|| (
(
media-libs/mesa[X(+)]
x11-libs/libGLw
)
media-libs/mesa[motif(-),X(+)]
)
media-libs/libjpeg-turbo:=
media-libs/libpng:=
media-libs/tiff:=
sys-libs/zlib
virtual/glu
x11-libs/libXpm
x11-libs/motif:0
x11-apps/xdpyinfo
media-fonts/font-adobe-100dpi
"
DEPEND="${RDEPEND}"
PATCHES=(
"${FILESDIR}"/${P}-gcc14-fix.patch
# Patch from http://pjf.net/science/molmol.html, where src.rpm is provided
"${WORKDIR}"/patches/pjf_RH9_molmol2k2.diff
"${WORKDIR}"/patches/ldflags.patch
"${WORKDIR}"/patches/opengl.patch
"${WORKDIR}"/patches/cast.patch
# patch from fink
# fixes numerous bad bracings and hopefully the OGL bug 429974
"${WORKDIR}"/patches/${P}-fink.patch
"${WORKDIR}"/patches/wild.patch
"${FILESDIR}"/${P}-transform-makefiles.patch
)
pkg_setup() {
MMDIR="/usr/$(get_libdir)/molmol"
}
src_prepare() {
default
eapply -p0 "${WORKDIR}"/patches/libpng15.patch
rm -rf tiff*
sed \
-e "s|^MOLMOLHOME.*|MOLMOLHOME=${EPREFIX}/${MMDIR}|" \
-i "${S}"/molmol || die
ln -s makedef.lnx "${S}"/makedef || die
# Parallel build fails (#880621) and cannot be disabled by MAKEOPTS
# (#880621, #941488).
find . -name Makefile -exec sed -i -e "1i .NOTPARALLEL:" {} + || die
# https://bugs.gentoo.org/944200
# uses C polymorphism. Can't be trivially patched
append-cflags -std=gnu17
tc-export AR CC
}
src_install() {
dobin molmol
exeinto ${MMDIR}
doexe src/main/molmol
insinto ${MMDIR}
doins -r auxil help macros man setup tips
make_desktop_entry "${PN}" MOLMOL
newicon "${DISTDIR}/${PN}_256.png" "${PN}.png"
einstalldocs
dodoc HISTORY
}
|
