sci-biology/glimmerhmm/files/glimmerhmm-3.0.1-fix-data-path.patch


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--- a/train/trainGlimmerHMM
+++ b/train/trainGlimmerHMM
@@ -12,7 +12,7 @@
 use Cwd;
 
 use FindBin;
-use lib $FindBin::Bin;
+use lib "/usr/share/glimmerhmm/lib";
 use orf;
 use formtrain;
 use dectree_allinfo;
@@ -20,7 +20,7 @@
 use splitiso;
 
 my $workdir=cwd();
-my $scriptdir=$FindBin::Bin; # directory where all training programs should be
+my $scriptdir="/usr/libexec/glimmerhmm/training_utils"; # directory where all training programs should be
 
 #print "workdir=$workdir scriptdir=$scriptdir\n";exit;