diff options
Diffstat (limited to 'sci-mathematics')
| -rw-r--r-- | sci-mathematics/Manifest.gz | bin | 16706 -> 16691 bytes | |||
| -rw-r--r-- | sci-mathematics/nauty/Manifest | 3 | ||||
| -rw-r--r-- | sci-mathematics/nauty/nauty-2.8.6.ebuild | 71 | ||||
| -rw-r--r-- | sci-mathematics/singular/Manifest | 4 | ||||
| -rw-r--r-- | sci-mathematics/singular/singular-4.3.1_p2.ebuild (renamed from sci-mathematics/singular/singular-4.2.1_p3-r1.ebuild) | 21 |
5 files changed, 78 insertions, 21 deletions
diff --git a/sci-mathematics/Manifest.gz b/sci-mathematics/Manifest.gz Binary files differindex db1ce7b7bca9..02a10fb874b1 100644 --- a/sci-mathematics/Manifest.gz +++ b/sci-mathematics/Manifest.gz diff --git a/sci-mathematics/nauty/Manifest b/sci-mathematics/nauty/Manifest index cc73ee7975d1..f6ecb6fd554b 100644 --- a/sci-mathematics/nauty/Manifest +++ b/sci-mathematics/nauty/Manifest @@ -1,5 +1,8 @@ DIST nauty-includes.patch 2530 BLAKE2B 8789bc2f65b89aa3bbf27e517f1c56340f9bde089ef54aa28757c66c3954b5c54e8a09b6989ad8d57098970240dd1838baa0003766fe10c7f6c32041abf461e3 SHA512 d11f530fecb86edc9e95f0b4d91240778047c0e84d6259c80490358baf0a3eeaa112acfe1fcdb594da6c6e17855f5e21cb75c88446b8d6d9e96402be0e5e6af2 DIST nauty27r4.tar.gz 1731562 BLAKE2B 104481e5af3333b60574a7185848832ad08b0cfeb8378e3c89ddd3f2cc87023cd701889356fa196b529ddbf19232a733fe3e694d9573adef04c2ad86baaf38e5 SHA512 2ed691bf0a6806f77cccbd95ee7687a66b6e6342493a0d65636166727cf4ea8cd887187d88a3154d911f665deb8d6f5bbaba33c8a1b740a564a1fc52bf4b4520 +DIST nauty2_8_6.tar.gz 1546765 BLAKE2B be8aa8ef816c8833a79876e6bf99b0dc4a23922f48684c8a3272c01b0b4eb64959366cae363fbda4200354a0833942b64e85c009fc35a3d6fa02f9b74c9b9a74 SHA512 9bc597d4341a6a67aece0ad95ecd4a649f675def73e97af1d215cf7399cbd3fb8e39f140cbd6f69740f2083c7a5739d5089e746bb3f831250709e0d2b43548b5 DIST nauty_2.7r4+ds-1.debian.tar.xz 45712 BLAKE2B e4a7a1d2b70b5fa969f708bbd56b47aaf422c268be23ffa7ceb3f9cc21ff8d27270556adadd43fe60309e7840e1541a586b1d9d42d90ba6207801e170b747922 SHA512 7384e7637a875c35f6da94707576aa26a94f981a750eb80991a837fa9ae245680f11ca57cf24a9efe1164dcd386c9888270688c1b3de30d1a81b67bb7c670dd9 +DIST nauty_2.8.6+ds-1.debian.tar.xz 62852 BLAKE2B fcbbed54b10d9dd4bdf82d8a72ef91866a235c7679266b8f395e2fe6b44a679e98f85462a42037094d856130d5456d9989749c416932f895bc17df8ef32241a2 SHA512 3784e0ec15c64ea6850f9198c61af3924fcedf1ffa4715fbd53a9bd1cd7defd69b543a8d4e6d46ef727918661409e2de77c89c3ca79f36769c1335b30bdd305c EBUILD nauty-2.7.4.ebuild 2318 BLAKE2B 2dd9d949fd6ce32e77c66b7fe8dbe1cf09c01d554a5293843550921b2266eafdff5b95112850ef1860971d0530c719c27ced2dd425651150ed7e7cd6cd174b03 SHA512 505a7dc984b7f49fcc033a32fea185cffebc99bc66eebde505980810cb9516228eedbc68cd98187355bbaa829c74bfba4dc503ce8bcdf1a4cbd84d93f8250875 +EBUILD nauty-2.8.6.ebuild 1765 BLAKE2B f0714a8d49c9bb96dff10e008b7312e3d4f7476de7bbb85f3d206d3da4cb515f4898093e73c3502feac653a13bc0bf4c00b37de83e3df46de5c9dfa3c5692822 SHA512 cc68bdbb9f13c2ddd1ca707ab949e920607bd855a192cfc929962d2f9c82f252572f23534c8375b6e84b102e44bb233ce8e2c386c824f4eb777c25a5664d1cec MISC metadata.xml 554 BLAKE2B a6fbface4e867c9299680da9d2fefce4194771220489b4d9a81d295bbf1a8048fe1bf23e3c3225501a18b23af8a7daea3533f8a7c250afc7f9a4bbbf60fc8efd SHA512 c7b67c8516b9bad6cd9f60a54b3b3a4974a72e81071f53cd6562a5bea2e2b8ae990119e4391615dd3b2e30282bf70924c4f2f4b5ccd3dcf1cb7399e7de189387 diff --git a/sci-mathematics/nauty/nauty-2.8.6.ebuild b/sci-mathematics/nauty/nauty-2.8.6.ebuild new file mode 100644 index 000000000000..4fc0728515d0 --- /dev/null +++ b/sci-mathematics/nauty/nauty-2.8.6.ebuild @@ -0,0 +1,71 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit autotools + +MY_PV=${PV//./_} +DEBIAN_PATCH_VERSION=1 + +DESCRIPTION="Computing automorphism groups of graphs and digraphs" +HOMEPAGE="https://pallini.di.uniroma1.it/" + +SRC_URI="https://pallini.di.uniroma1.it/${PN}${MY_PV}.tar.gz + mirror://debian/pool/main/${PN:0:1}/${PN}/${PN}_${PV}+ds-${DEBIAN_PATCH_VERSION}.debian.tar.xz + https://src.fedoraproject.org/rpms/nauty/raw/f35/f/nauty-includes.patch" + +LICENSE="Apache-2.0" +SLOT="0" +KEYWORDS="~amd64 ~arm ~riscv ~x86" +IUSE="cpu_flags_x86_popcnt examples" + +BDEPEND="sys-apps/help2man" +DEPEND="dev-libs/gmp:0 + sys-libs/zlib + sci-mathematics/cliquer" +RDEPEND="${DEPEND}" + +S="${WORKDIR}/${PN}${MY_PV}" + +DOCS=( schreier.txt formats.txt changes24-28.txt ) + +PATCHES=( + "${WORKDIR}/debian/patches/upstream-fix-gt_numorbits.patch" + "${WORKDIR}/debian/patches/upstream-C2help2man.patch" + "${WORKDIR}/debian/patches/upstream-autotoolization.patch" + "${DISTDIR}/nauty-includes.patch" + "${WORKDIR}/debian/patches/unbundle-cliquer.patch" + "${WORKDIR}/debian/patches/upstream-zlib-dimacs2g.patch" + "${WORKDIR}/debian/patches/fall-off.patch" + "${WORKDIR}/debian/patches/format.patch" +) + +src_prepare() { + default + rm makefile || die + + # The debian patch looks for <cliquer.h>, but the autotools-form of + # cliquer installs that header as <cliquer/cliquer.h>. + sed -e 's~<cliquer\.h>~<cliquer/cliquer\.h>~' -i nautycliquer.h || die + + eautoreconf +} + +src_configure() { + econf --disable-static \ + --enable-tls \ + --enable-generic \ + $(use_enable cpu_flags_x86_popcnt popcnt) +} + +src_install() { + default + + if use examples; then + docinto examples + dodoc nautyex*.c + fi + + find "${ED}" -name '*.la' -delete || die +} diff --git a/sci-mathematics/singular/Manifest b/sci-mathematics/singular/Manifest index 27c494999847..46f01271a63f 100644 --- a/sci-mathematics/singular/Manifest +++ b/sci-mathematics/singular/Manifest @@ -4,9 +4,9 @@ AUX singular-4.1.3-doc_install.patch 2834 BLAKE2B d8e35169534ed9087fc1faf6029a11 AUX singular-4.2.0-no-static.patch 2644 BLAKE2B 466705130179efe13cd4bdccb09e0bc2a5a0efaf36536009054235f6a44af932c359cee366eef860235739c480fea84e9ca48947597d2c3aaf2e26bdb3fada88 SHA512 53dd7045d717f62817b0fd03963a8cf2ba4e88387b89e854a1cc6a2817bf975fd7e16852e948b64182d049b8c184459d4e071bbb5f8c6ca5998c4c1b964deef5 AUX singular-4.2.1-htmldoc.patch 2086 BLAKE2B 28ab2e8ef9ad2ff1343d3efd33917503c00fb74428f35b1ab0fb1475368d3760d3c915668d4fb008ccc618e2aa1c13a35f66d3a62f8c3abe93b5275f1648c8e7 SHA512 5c28c31bc51a937ddff4e52da3ed93f20516b64ac6abfc05031d09e708e557268e757c55e625abfd77c19600f64a7f284903de619c113a57194367e23148ff82 DIST singular-4.2.0p1.tar.gz 14155171 BLAKE2B 444553f87d7ca8d6a62e4519c9857a6892757e92285df7c3b686913a9b51c9ae8d802c41382b0b2b6e37dc2dc496d4a10f262c98407470219cdce131e8baf127 SHA512 2ecd8940c9e8d70a93dbdb4df6da313c00151e5cb959f8eed5856e8df99089b5a03e514fbcdc70903c77df8b59fa7ef9f3b134f1de510b795fa6ea0341089bd8 -DIST singular-4.2.1p3.tar.gz 15042102 BLAKE2B 9958c1c432f8a3516387cfe7b258d2e22e8e9fdf3874de53a803b34e353088a3ce246a90b78db43f186717985b503d2355f524ee80784e63b186d53217fdeead SHA512 1e6533fcf966499e9ad145b640e7e5878eb9738bd65535aaa517c5e98dedb09bc99bf832359e9b6dca2fff615237f855bd861820e592a885341aa82e7a9a9168 DIST singular-4.3.1p1.tar.gz 15090370 BLAKE2B d4e40378b3892b98b1f78c3928c8a40484336ea25ea4dcd4b3a1e5f651281d2cdb06d92c9cc64427ce76e91c5bf4eaa1c3b643df174a24c188823ae808817ad9 SHA512 d27d8e042ea085e49aed6a0697056c36e78e62ea0b9d17751cdf4c556cf4f6efce3b34b411c77aef97c6d90675bea11c97651eb7009634cb8a9b630ec820a06e +DIST singular-4.3.1p2.tar.gz 15088650 BLAKE2B 17d73518653f6348297c955214aa8d30b3ce7cdf342f1bbb6fb49b746ddc563b1f46906df92f45abd601c834c77139f7aaccadf14bf706010017564d56948ca2 SHA512 ff2282b2fcd1a5b8809297036d524838403a2b66ae87ceb566ed6ff0571843d3c4aa0f7a4abbaab8541630f4e0130b6171ea0a7b8a5296b3b10f6c5cd5088828 EBUILD singular-4.2.0_p1.ebuild 2259 BLAKE2B 2237245fe2550f398a20a14ae599bcc668288aa6312925cee725e2571dc53f8f62f88bdff0cdf8cd303c72baaf2861a2c560ce54978da720e93cbe459769b7d1 SHA512 2a6b8e478f32ff9e3df96e0188cd137b16d9be1a8c18c9f5367a81b96dc8b0cc01d34771246001eee9e8ec9832f8832539e921879ec56fe8a51ebb42c0d29389 -EBUILD singular-4.2.1_p3-r1.ebuild 2628 BLAKE2B 5ff968e3c06d722d2f1c0c872ea4c541e9e5e90bda4e8af8e54ba38aba21464ed8f7cfea727883de0ed34831f12c780ed45dd2a038856a19d142200d0073688e SHA512 8d0e74684f138c08288ac642ad0450a364c5b0deb6f805680289408d54fee563cadd32a81297a48e8148679b537903190e8abba069a60e38e06cb8bc10b6ee75 EBUILD singular-4.3.1_p1.ebuild 2295 BLAKE2B 399f910678833dd16cc93039c18733c46f98e05cf95c0e2a1165d4669b75558dedfebf57703cec0f518c029d84a5e1c9a2f029dc5f9c125b4ac4924fa3c61221 SHA512 c9a986a5ac4063c574f9fbe6ef4ca3e38a1840bf2bd2e1c4b77e0ad85676d1c2eb3d586125af818dce7ab665c635908da9ffc1a7e4fbaa034498556cd4df17dc +EBUILD singular-4.3.1_p2.ebuild 2296 BLAKE2B 4c1cacc1976fa42355106d381764b0ce6bb7ac78d0c540b83b634036456af4c8dc7404fc73bf0187c39a8c3eeeb94f451590afd687fd512e3aba3056a5b35ead SHA512 9e944311c909a6cfeee4a5efc97714b2c5f9c3c3ec2104435685cde4bdaa527ffcf3ea7db9cbacea59fe7c4afe6023c1059261b29143be97391111b213704acf MISC metadata.xml 782 BLAKE2B 7f10704c78b5a55cff9d07ffc3456a57aba4001ffd337dfbbb712e32608446ab9ae8039d14143939ad41710dcc6d4725992db2c80bcd1678397e563fefa929b4 SHA512 3c4904a4a8f63ff073745409caf9a9a68aa5d46861b8e8d77a538716a7a6a099d87137d604e52a3b8ce4ab81b7333f95389cd888ccbabe52017b6e8b1e4a77d0 diff --git a/sci-mathematics/singular/singular-4.2.1_p3-r1.ebuild b/sci-mathematics/singular/singular-4.3.1_p2.ebuild index 640dfeb3b453..fb5b4a7f3ed2 100644 --- a/sci-mathematics/singular/singular-4.2.1_p3-r1.ebuild +++ b/sci-mathematics/singular/singular-4.3.1_p2.ebuild @@ -3,7 +3,7 @@ EAPI=8 -inherit autotools elisp-common flag-o-matic +inherit elisp-common MY_PN=Singular MY_PV=$(ver_rs 3 '') @@ -18,7 +18,7 @@ S="${WORKDIR}/${PN}-${MY_DIR2}" LICENSE="BSD GPL-2 GPL-3" SLOT="0" -KEYWORDS="amd64 ~ppc ~riscv ~x86 ~x86-linux" +KEYWORDS="~amd64 ~ppc ~riscv ~x86 ~x86-linux" IUSE="emacs examples polymake +readline static-libs" RDEPEND=" @@ -35,24 +35,7 @@ DEPEND="${RDEPEND}" SITEFILE=60${PN}-gentoo.el -PATCHES=( - "${FILESDIR}/${PN}-4.2.1-htmldoc.patch" -) - -src_prepare() { - default - - eautoreconf -} - src_configure() { - # Needed to avoid segfaults in the test suite until - # - # https://github.com/Singular/Singular/issues/1105 - # - # makes its way into a release. - append-cxxflags $(test-flags-CXX -fno-delete-null-pointer-checks) - local myconf=( --disable-debug --disable-doc |