diff options
Diffstat (limited to 'sci-libs')
| -rw-r--r-- | sci-libs/Manifest.gz | bin | 43597 -> 43597 bytes | |||
| -rw-r--r-- | sci-libs/htslib/Manifest | 2 | ||||
| -rw-r--r-- | sci-libs/htslib/htslib-1.15.1.ebuild | 52 |
3 files changed, 0 insertions, 54 deletions
diff --git a/sci-libs/Manifest.gz b/sci-libs/Manifest.gz Binary files differindex 7e2e6ecde7e7..e5387f50f5b2 100644 --- a/sci-libs/Manifest.gz +++ b/sci-libs/Manifest.gz diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest index 839656915080..219cd1fd26dc 100644 --- a/sci-libs/htslib/Manifest +++ b/sci-libs/htslib/Manifest @@ -1,5 +1,3 @@ -DIST htslib-1.15.1.tar.bz2 4141140 BLAKE2B 312f67c8916586199b32b7703b43a9fd365b8af22802bf4d63fc40960c62b956915e7c60bbd777a8b179066608cd3a281929a10b60eef21d6eedb4caf8c147c1 SHA512 69d0c7f3ac50a9b9c579e9b3479b6745fc30d0ac838ff14695cf4e3da593854350e345ed1f4a496931ef57395f3416da4316903488f3e641f1e00fec544f3620 DIST htslib-1.16.tar.bz2 4466776 BLAKE2B 4957dd7a25b3d0b939d4e924db018916a5f8a13a81e55ebd1ce1acc548986e581d017ead9a08245a4af1ebdcd15536f082425ebe05f16eb4faad27d332e48482 SHA512 9fa0b1f9bba50f889d4542825c9543fb3b34c13b4cc0e18940a66fafd130749574bfa2c2663d8b39f0b4ed2b298bf130367cda1b17b2929093d64b386730cbc5 -EBUILD htslib-1.15.1.ebuild 1074 BLAKE2B d04ae956ac6d4819704e8342d9679d0c54274c09da155c6d73d0e889b3db75cfbbae80665e750c0d7387cf9eeeac7642ff31bbe301220cef06915d7081c3aa74 SHA512 6c617b18f47e2823077527653dcf2a6976577efde1481087d5188ce151089edc9a98343ef6ad3864117477c60531694287adae5def956f016d6e105445ae1963 EBUILD htslib-1.16.ebuild 1074 BLAKE2B d04ae956ac6d4819704e8342d9679d0c54274c09da155c6d73d0e889b3db75cfbbae80665e750c0d7387cf9eeeac7642ff31bbe301220cef06915d7081c3aa74 SHA512 6c617b18f47e2823077527653dcf2a6976577efde1481087d5188ce151089edc9a98343ef6ad3864117477c60531694287adae5def956f016d6e105445ae1963 MISC metadata.xml 342 BLAKE2B 1c27212ba39cbbd235e2b023af977d5dffbb53dab193e21c989b2da52641fec13317110cfb52fd73cbe7fbdd5aa6b3628ee7cd55ae919551fa82267b05f93e2d SHA512 5b61d1b204a33d6328d3964346c48dc35bc4e29c56dc7920a63caf2fc510be35b10f74f2649a2670239de90cff5ed4652fa99d4ef51a55245b7fc4b31f29674b diff --git a/sci-libs/htslib/htslib-1.15.1.ebuild b/sci-libs/htslib/htslib-1.15.1.ebuild deleted file mode 100644 index c4bd910685de..000000000000 --- a/sci-libs/htslib/htslib-1.15.1.ebuild +++ /dev/null @@ -1,52 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit toolchain-funcs - -DESCRIPTION="C library for high-throughput sequencing data formats" -HOMEPAGE="http://www.htslib.org/" -SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2" - -LICENSE="MIT" -SLOT="0/3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="+bzip2 curl +lzma" - -RDEPEND=" - sys-libs/zlib - bzip2? ( app-arch/bzip2 ) - curl? ( net-misc/curl ) - lzma? ( app-arch/xz-utils )" -DEPEND="${RDEPEND}" - -src_prepare() { - default - - # upstream injects LDFLAGS into the .pc file, - # which is a big nono for QA - sed -e '/^\(static_l\|Libs.private\|Requires.private\)/d' \ - -i htslib.pc.in || die -} - -src_configure() { - econf \ - --disable-gcs \ - --disable-plugins \ - --disable-s3 \ - $(use_enable bzip2 bz2) \ - $(use_enable curl libcurl) \ - $(use_enable lzma) -} - -src_compile() { - emake AR="$(tc-getAR)" -} - -src_install() { - default - - # doesn't use libtool, can't disable static libraries - find "${ED}" -name '*.a' -delete || die -} |