diff options
Diffstat (limited to 'sci-biology/primer3/primer3-2.3.7-r1.ebuild')
-rw-r--r-- | sci-biology/primer3/primer3-2.3.7-r1.ebuild | 52 |
1 files changed, 52 insertions, 0 deletions
diff --git a/sci-biology/primer3/primer3-2.3.7-r1.ebuild b/sci-biology/primer3/primer3-2.3.7-r1.ebuild new file mode 100644 index 000000000000..b36e9291db94 --- /dev/null +++ b/sci-biology/primer3/primer3-2.3.7-r1.ebuild @@ -0,0 +1,52 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit toolchain-funcs + +DESCRIPTION="Primer Design for PCR reactions" +HOMEPAGE="http://primer3.sourceforge.net/" +SRC_URI="mirror://sourceforge/project/${PN}/${PN}/${PV}/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris" + +BDEPEND="dev-lang/perl" + +PATCHES=( + "${FILESDIR}"/${P}-buildsystem.patch + "${FILESDIR}"/${P}-gcc7.patch +) + +src_prepare() { + default + if [[ ${CHOST} == *-darwin* ]]; then + sed -e "s:LIBOPTS ='-static':LIBOPTS =:" -i Makefile || die + fi +} + +src_configure() { + tc-export AR CC CXX +} + +src_compile() { + emake -C src +} + +src_test() { + emake -C test | tee "${T}"/test.log + grep -q "\[FAILED\]" && die "test failed. See ${T}/test.log" +} + +src_install() { + dobin src/{long_seq_tm_test,ntdpal,oligotm,primer3_core} + + insinto /opt/primer3_config + doins -r src/primer3_config/. primer3*settings.txt + + dodoc src/release_notes.txt example + docinto html + dodoc primer3_manual.htm +} |