diff options
Diffstat (limited to 'sci-biology/njplot/files/njplot-2.3-buildsystem.patch')
-rw-r--r-- | sci-biology/njplot/files/njplot-2.3-buildsystem.patch | 59 |
1 files changed, 0 insertions, 59 deletions
diff --git a/sci-biology/njplot/files/njplot-2.3-buildsystem.patch b/sci-biology/njplot/files/njplot-2.3-buildsystem.patch deleted file mode 100644 index 61f8b95ea160..000000000000 --- a/sci-biology/njplot/files/njplot-2.3-buildsystem.patch +++ /dev/null @@ -1,59 +0,0 @@ - makefile | 16 ++++++++-------- - 1 file changed, 8 insertions(+), 8 deletions(-) - -diff --git a/makefile b/makefile -index ccb7dc2..9488c2a 100644 ---- a/makefile -+++ b/makefile -@@ -7,10 +7,10 @@ NO_PDF = -DNO_PDF - #PDFLIB = -L$(PDF) -lpdf - - # c compiler and linker --CC = gcc -+CC ?= gcc - - # Vibrant top directory --VIBRANT = /banques0/ncbiJun04 -+VIBRANT = /usr/include/ncbi - - - # X11 include directory -@@ -24,15 +24,15 @@ OBJECTS = njplot-vib.o - OBJUNROOTED = unrooted-vib.o preptree.o - - --CFLAGS = -c -DWIN_MOTIF -Dunix -I$(VIBRANT)/include -I$(VIBRANT)/vibrant -I$(VIBRANT)/corelib \ -+CFLAGS += -c -DWIN_MOTIF -Dunix -I$(VIBRANT)/include -I$(VIBRANT)/vibrant -I$(VIBRANT)/corelib \ - -I$(VIBRANT) -I$(PDF) -I$(X11INCL) -I$(MOTIFINCL) $(HELPFILENAME) $(NO_PDF) \ -- -Wimplicit-function-declaration -g -+ -Wimplicit-function-declaration - - all: njplot unrooted newicktops newicktotxt - - - njplot : $(OBJECTS) -- $(CC) -g -o njplot $(OBJECTS) \ -+ $(CC) $(LDFLAGS) -o njplot $(OBJECTS) \ - -L$(VIBRANT)/lib \ - -lvibrant -lncbi \ - $(PDFLIB) \ -@@ -40,16 +40,16 @@ njplot : $(OBJECTS) - -L/usr/X11R6/lib -lXmu -lXt -lX11 -lm - - unrooted : $(OBJUNROOTED) -- $(CC) -g -o unrooted $(OBJUNROOTED) \ -+ $(CC) $(LDFLAGS) -o unrooted $(OBJUNROOTED) \ - -L$(VIBRANT)/lib -lvibrant -lncbi \ - -L$(MOTIFLIB) -lXm \ - -L/usr/X11R6/lib -lXmu -lXt -lX11 -lm - - newicktops: njplot-vib.c -- $(CC) -DNO_GUI -DNO_PDF -o $@ njplot-vib.c -lm -+ $(CC) $(LDFLAGS) $(CFLAGS) -DNO_GUI -DNO_PDF -o $@ njplot-vib.c -lm - - newicktotxt: njplot-vib.c -- $(CC) -DTTY -o $@ njplot-vib.c -lm -+ $(CC) -DTTY $(LDFLAGS) $(CFLAGS) -o $@ njplot-vib.c -lm - - - .c.o : |