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diff --git a/sci-biology/mummer/mummer-3.23-r1.ebuild b/sci-biology/mummer/mummer-3.23-r1.ebuild
new file mode 100644
index 000000000000..59a66abe2f04
--- /dev/null
+++ b/sci-biology/mummer/mummer-3.23-r1.ebuild
@@ -0,0 +1,44 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit flag-o-matic toolchain-funcs
+
+DESCRIPTION="A rapid whole genome aligner"
+HOMEPAGE="http://mummer.sourceforge.net/"
+SRC_URI="mirror://sourceforge/mummer/MUMmer${PV}.tar.gz"
+S="${WORKDIR}/MUMmer${PV}"
+
+LICENSE="Artistic"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="doc"
+
+RDEPEND="
+	app-shells/tcsh
+	dev-lang/perl"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-3.23-fix-build-system.patch
+	"${FILESDIR}"/${PN}-3.23-fix-c++-qa.patch
+	"${FILESDIR}"/${PN}-3.23-fix-shebangs.patch
+)
+
+src_configure() {
+	use amd64 && append-cppflags -DSIXTYFOURBITS
+	tc-export AR CC CXX
+}
+
+src_install() {
+	dobin src/kurtz/mm3src/mummer
+	dobin src/tigr/{combineMUMs,delta-filter,gaps,mgaps,postnuc,postpro,prenuc,prepro,repeat-match,show-aligns,show-coords,show-tiling,show-snps,show-diff}
+	dobin scripts/{exact-tandems,mapview,mummerplot,dnadiff,nucmer,promer,run-mummer1,run-mummer3,nucmer2xfig}
+	newbin src/tigr/annotate mummer-annotate
+
+	insinto /usr/share/mummer/lib
+	doins scripts/Foundation.pm
+
+	einstalldocs
+	use doc && dodoc -r docs/.
+}