diff options
Diffstat (limited to 'sci-biology/lagan/files/lagan-2.0-gcc-4.8.patch')
| -rw-r--r-- | sci-biology/lagan/files/lagan-2.0-gcc-4.8.patch | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/sci-biology/lagan/files/lagan-2.0-gcc-4.8.patch b/sci-biology/lagan/files/lagan-2.0-gcc-4.8.patch new file mode 100644 index 000000000000..3d7ed780445f --- /dev/null +++ b/sci-biology/lagan/files/lagan-2.0-gcc-4.8.patch @@ -0,0 +1,25 @@ +Author: Andreas Tille <tille@debian.org> +LastChanged: Fri, 15 Nov 2013 10:31:20 +0100 +Description: Fix some includes to build using gcc-4.8 + +--- a/src/utils/Glue.cpp ++++ b/src/utils/Glue.cpp +@@ -6,6 +6,7 @@ + #include <fstream> + #include <iostream> + #include <algorithm> ++#include <string.h> + + #define NUCLEOTIDE_MATRIX_FILE "nucmatrix.txt" + #define MAX_LINE_LENGTH 1024 +--- a/src/glocal/score.cpp ++++ b/src/glocal/score.cpp +@@ -2,7 +2,7 @@ + #include<score.h> + #include<leftinfluence.h> + #include<rightinfluence.h> +-#include<fstream.h> ++#include<fstream> + + extern vector<class Score*> scoreFunctions[1<<(UPSTRANDBITS+DOWNSTRANDBITS+RELPOSBITS)]; + |