diff options
Diffstat (limited to 'sci-biology/fasttree/files/CMakeLists.txt')
| -rw-r--r-- | sci-biology/fasttree/files/CMakeLists.txt | 25 |
1 files changed, 13 insertions, 12 deletions
diff --git a/sci-biology/fasttree/files/CMakeLists.txt b/sci-biology/fasttree/files/CMakeLists.txt index e7c53afdaf36..c52b90cc7be2 100644 --- a/sci-biology/fasttree/files/CMakeLists.txt +++ b/sci-biology/fasttree/files/CMakeLists.txt @@ -1,23 +1,24 @@ -cmake_minimum_required (VERSION 2.6) +cmake_minimum_required (VERSION 2.8.12) project(fasttree C) +include(GNUInstallDirs) + option(USE_OPENMP "Use OpenMP to parallelize many of the steps in computing a tree" ON) -option(USE_DOUBLE "Use double precission" OFF) +option(USE_DOUBLE "Use double precision" OFF) option(HAS_SSE3 "Use SSE2/SSE3 instructions to speed up some inner loops" ON) if(USE_OPENMP) - SET( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DOPENMP -fopenmp" ) - SET( CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -DOPENMP -fopenmp" ) -endif(USE_OPENMP) + set( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DOPENMP -fopenmp" ) + set( CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -DOPENMP -fopenmp" ) +endif() if(USE_DOUBLE) - SET( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DUSE_DOUBLE" ) -endif(USE_DOUBLE) + set( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DUSE_DOUBLE" ) +endif() if(NOT HAS_SSE3) - SET( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DNO_SSE" ) -endif(NOT HAS_SSE3) - + set( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DNO_SSE" ) +endif() add_executable(FastTree FastTree-${VERSION}.c) add_executable(FastTreeUPGMA FastTreeUPGMA-${VERSION}.c) @@ -25,6 +26,6 @@ add_executable(FastTreeUPGMA FastTreeUPGMA-${VERSION}.c) target_link_libraries(FastTree m) target_link_libraries(FastTreeUPGMA m) -install (TARGETS FastTree FastTreeUPGMA DESTINATION bin) +install (TARGETS FastTree FastTreeUPGMA DESTINATION ${CMAKE_INSTALL_BINDIR}) -install(FILES MOTree.pm CompareTree.pl CompareToBootstrap.pl DESTINATION share/fasttree) +install(FILES MOTree.pm CompareTree.pl CompareToBootstrap.pl DESTINATION ${CMAKE_INSTALL_DATAROOTDIR}/fasttree) |