1 files changed, 0 insertions, 55 deletions
diff --git a/sci-biology/express/files/express-1.5.1-buildsystem.patch b/sci-biology/express/files/express-1.5.1-buildsystem.patch
deleted file mode 100644
index fca5feadd111..000000000000
--- a/sci-biology/express/files/express-1.5.1-buildsystem.patch
+++ /dev/null
@@ -1,55 +0,0 @@
- CMakeLists.txt     | 8 +++-----
- src/CMakeLists.txt | 4 ++--
- 2 files changed, 5 insertions(+), 7 deletions(-)
-
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index c768e28..65d5633 100644
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -6,14 +6,12 @@ set(${PROJECT_NAME}_VERSION_MAJOR 1)
- set(${PROJECT_NAME}_VERSION_MINOR 5)
- set(${PROJECT_NAME}_VERSION_PATCH 1)
- 
--set(CMAKE_CXX_FLAGS "-Wall")
--
- set(CMAKE_CXX_FLAGS_DEBUG "-g ${CMAKE_CXX_FLAGS}")
- set(CMAKE_CXX_FLAGS_RHDEBINFO "-O3 -g ${CMAKE_CXX_FLAGS}")
- set(CMAKE_CXX_FLAGS_MINSIZEREL "-Os ${CMAKE_CXX_FLAGS}")
- 
- set(CMAKE_BUILD_TYPE Release)
--set(Boost_USE_STATIC_LIBS ON)
-+set(Boost_USE_STATIC_LIBS OFF)
- 
- find_package(Boost 1.39
-     COMPONENTS
-@@ -33,10 +31,10 @@ endif(GPERFTOOLS_TCMALLOC_LIB)
- 
- find_package(Protobuf)
- if (PROTOBUF_FOUND)
--  include_directories(${Boost_INCLUDE_DIRS} ${PROTOBUF_INCLUDE_DIR} "${CMAKE_CURRENT_SOURCE_DIR}/bamtools/include") 
-+  include_directories(${Boost_INCLUDE_DIRS} ${PROTOBUF_INCLUDE_DIR} ${BAMTOOLS_INCLUDE})
- 	set(PROTO_INT 1)
- else (PROTOBUF_FOUND)
--  include_directories(${Boost_INCLUDE_DIRS} "${CMAKE_CURRENT_SOURCE_DIR}/bamtools/include") 
-+  include_directories(${Boost_INCLUDE_DIRS} ${BAMTOOLS_INCLUDE})
- 	set(PROTO_INT 0)
- endif(PROTOBUF_FOUND)
- 
-diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
-index 1cc0c01..8929d1f 100644
---- a/src/CMakeLists.txt
-+++ b/src/CMakeLists.txt
-@@ -16,11 +16,11 @@ endif (GPERFTOOLS_TCMALLOC)
- if(WIN32)
-   set(LIBRARIES ${LIBRARIES} "${CMAKE_CURRENT_SOURCE_DIR}/../bamtools/lib/libbamtools.lib" "${CMAKE_CURRENT_SOURCE_DIR}/../win_build/zlibd.lib")
- else(WIN32)
--  set(LIBRARIES ${LIBRARIES} "${CMAKE_CURRENT_SOURCE_DIR}/../bamtools/lib/libbamtools.a" "pthread")
-+  set(LIBRARIES ${LIBRARIES} "bamtools" "pthread")
- endif(WIN32)
- 
- if (PROTOBUF_FOUND)
--  set(LIBRARIES ${LIBRARIES} "libprotobuf.a")
-+  set(LIBRARIES ${LIBRARIES} "protobuf")
- endif(PROTOBUF_FOUND)
- 
- target_link_libraries(express ${LIBRARIES})