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-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-2.0.22
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-99992
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin21890 -> 21890 bytes
-rw-r--r--metadata/md5-cache/sci-biology/augustus-3.4.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-2.5.22
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-99992
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.15.12
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.162
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.30.02
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.2.72
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.792
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-2.4.42
-rw-r--r--metadata/md5-cache/sci-biology/express-1.5.12
-rw-r--r--metadata/md5-cache/sci-biology/fasttree-2.1.112
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-0.46.22
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.19.12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-3.1.02
-rw-r--r--metadata/md5-cache/sci-biology/uchime-4.2.40-r12
18 files changed, 17 insertions, 17 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 b/metadata/md5-cache/sci-biology/HTSeq-2.0.2
index 2640b1e8c7ce..e0db1a8b0523 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-2.0.2
+++ b/metadata/md5-cache/sci-biology/HTSeq-2.0.2
@@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe
RESTRICT=!test? ( test ) !test? ( test )
SLOT=0
SRC_URI=https://github.com/htseq/htseq/archive/release_2.0.2.tar.gz -> HTSeq-2.0.2.gh.tar.gz
-_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea flag-o-matic 69394e25812406faa1f90edaf4969395 multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 python-r1 2d51fd03931e743811ce30d198e4dcfd python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea flag-o-matic 69394e25812406faa1f90edaf4969395 multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b python-r1 ca02b49ab4dd44b606c151aa296ef399 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=eaf0038e987d5268b687db2978b9cf87
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index c259fc11f91d..b898ab76457c 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -12,5 +12,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 )
RESTRICT=!test? ( test ) !test? ( test )
SLOT=0
-_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea flag-o-matic 69394e25812406faa1f90edaf4969395 git-r3 2347f8fe2d392b2a091191f94be37e6f multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 python-r1 2d51fd03931e743811ce30d198e4dcfd python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea flag-o-matic 69394e25812406faa1f90edaf4969395 git-r3 2347f8fe2d392b2a091191f94be37e6f multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b python-r1 ca02b49ab4dd44b606c151aa296ef399 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=eaf0038e987d5268b687db2978b9cf87
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index 510d1a7d555a..b8b45966328b 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/augustus-3.4.0-r2 b/metadata/md5-cache/sci-biology/augustus-3.4.0-r2
index f885e2a2bf8d..c43903b423c1 100644
--- a/metadata/md5-cache/sci-biology/augustus-3.4.0-r2
+++ b/metadata/md5-cache/sci-biology/augustus-3.4.0-r2
@@ -11,5 +11,5 @@ LICENSE=Artistic
RDEPEND=dev-db/sqlite:3 dev-db/mysql++:= dev-db/mysql-connector-c:= dev-libs/boost:=[zlib] sci-biology/bamtools:= sci-biology/samtools:0 sci-libs/gsl:= sci-libs/htslib:= sci-libs/suitesparse sci-mathematics/lpsolve sys-libs/zlib
SLOT=0
SRC_URI=https://github.com/Gaius-Augustus/Augustus/archive/refs/tags/v3.4.0.tar.gz -> augustus-3.4.0.tar.gz
-_eclasses_=docs 2af4a2f0074bd646101ce0f66ca6dd03 multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=docs 314e509c51630fb75f120d62a77d008c multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=8e0685d98ec63cf1f73ecd92587e2265
diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2
index dbc1c839ae04..9170ff09003f 100644
--- a/metadata/md5-cache/sci-biology/bamtools-2.5.2
+++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2
@@ -10,5 +10,5 @@ LICENSE=MIT
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/2.5.2
SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz
-_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
+_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
_md5_=efdfbdbf4181a018ee9965d5c16be71f
diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999
index 8ca418a32289..f3270d126bf5 100644
--- a/metadata/md5-cache/sci-biology/bamtools-9999
+++ b/metadata/md5-cache/sci-biology/bamtools-9999
@@ -9,5 +9,5 @@ LICENSE=MIT
PROPERTIES=live
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/9999
-_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 git-r3 2347f8fe2d392b2a091191f94be37e6f multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
+_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 git-r3 2347f8fe2d392b2a091191f94be37e6f multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
_md5_=a2299dc6ca850c1c25582656d7586681
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.15.1 b/metadata/md5-cache/sci-biology/bcftools-1.15.1
index a64d364da4eb..3bafcfc54361 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.15.1
+++ b/metadata/md5-cache/sci-biology/bcftools-1.15.1
@@ -12,5 +12,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py
REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.15.1/bcftools-1.15.1.tar.bz2
-_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=a991b200539f7c26af7f584fe62e90f5
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.16 b/metadata/md5-cache/sci-biology/bcftools-1.16
index d17324f6f020..dab0cda8403f 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.16
+++ b/metadata/md5-cache/sci-biology/bcftools-1.16
@@ -12,5 +12,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py
REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 python_single_target_python3_11 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.16/bcftools-1.16.tar.bz2
-_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=6db47fe6dd9b7f6dae282c829dd08dbd
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0
index 1c2d9b8b5c7e..0ad75b788540 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.30.0
+++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0
@@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz
-_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 1a218637f27d4c027b92e511707264fd python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 d2955aaac8daaaa69fcc6dc93ed19f29 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=5f18ddd41275559b1783fee4a2405f1f
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7
index 6456b235916a..c441bab0c0a4 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.2.7
+++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7
@@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe
RESTRICT=!test? ( test ) !test? ( test )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz
-_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 python-r1 2d51fd03931e743811ce30d198e4dcfd python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b python-r1 ca02b49ab4dd44b606c151aa296ef399 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=493935812e002415b6fce30c9e9dc8f8
diff --git a/metadata/md5-cache/sci-biology/biopython-1.79 b/metadata/md5-cache/sci-biology/biopython-1.79
index 33fb8a92579b..509423c13af5 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.79
+++ b/metadata/md5-cache/sci-biology/biopython-1.79
@@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 )
SLOT=0
SRC_URI=mirror://pypi/b/biopython/biopython-1.79.tar.gz
-_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 optfeature 1a2157392a869265b2afcb63a26c12ac python-r1 2d51fd03931e743811ce30d198e4dcfd python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b optfeature 1a2157392a869265b2afcb63a26c12ac python-r1 ca02b49ab4dd44b606c151aa296ef399 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=89d2124a2c9f76eda9c399f23c96a8b8
diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4
index 052935e61b94..6f63b4bca713 100644
--- a/metadata/md5-cache/sci-biology/bowtie-2.4.4
+++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4
@@ -12,5 +12,5 @@ RDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.16:3.8 ) python_
REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 )
SLOT=2
SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip
-_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=a169406c93e64d9cae6cbb8ad262f62b
diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1
index 5876ecaf8679..b80caa00849b 100644
--- a/metadata/md5-cache/sci-biology/express-1.5.1
+++ b/metadata/md5-cache/sci-biology/express-1.5.1
@@ -10,5 +10,5 @@ LICENSE=Artistic
RDEPEND=dev-libs/boost:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib
SLOT=0
SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz
-_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
+_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
_md5_=eb3d3db6cbf83564b8ecca377c50dd20
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11
index 1f731ba1edca..c027cdcc3e23 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.11
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11
@@ -10,5 +10,5 @@ LICENSE=GPL-2
REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
SLOT=0
SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz
-_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
+_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
_md5_=4a94b8db43f0aadb5ece67757ccbe635
diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2
index 004f22b06649..110683a8c5e8 100644
--- a/metadata/md5-cache/sci-biology/kallisto-0.46.2
+++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2
@@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz
-_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
+_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a
_md5_=1b739cad0275e6dc5a320723611b78e9
diff --git a/metadata/md5-cache/sci-biology/pysam-0.19.1 b/metadata/md5-cache/sci-biology/pysam-0.19.1
index c649bfc0b772..865f20bb59f4 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.19.1
+++ b/metadata/md5-cache/sci-biology/pysam-0.19.1
@@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.19.1.tar.gz -> pysam-0.19.1.gh.tar.gz
-_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 python-r1 2d51fd03931e743811ce30d198e4dcfd python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
+_eclasses_=distutils-r1 9c5f8e35fdc556c29573796aca3e87ea multibuild d26d81f242cb193d899a72bca423d0bd multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b python-r1 ca02b49ab4dd44b606c151aa296ef399 python-utils-r1 1d1b325c00c1d24c564a1b49327ec3c5 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491
_md5_=baed35c86cd8709cd139815786cd17ac
diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0
index 4b50426eb1a1..087bd6637003 100644
--- a/metadata/md5-cache/sci-biology/seqan-3.1.0
+++ b/metadata/md5-cache/sci-biology/seqan-3.1.0
@@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib
REQUIRED_USE=cpu_flags_x86_sse4_2
SLOT=0
SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz
-_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 xdg-utils ac0e315a3688929e34ac75b139e7349a
+_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 xdg-utils ac0e315a3688929e34ac75b139e7349a
_md5_=327a33751512d78b13d5acd641ba3385
diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
index 2a11832e9dcd..3aab4583c77e 100644
--- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
+++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
@@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
LICENSE=public-domain
SLOT=0
SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz
-_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 8ed38f92fe095be374d6c4c8d4c0dda7 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 xdg-utils ac0e315a3688929e34ac75b139e7349a
+_eclasses_=cmake 646b7a2a63596361551a6c1fabf28057 flag-o-matic 69394e25812406faa1f90edaf4969395 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 xdg-utils ac0e315a3688929e34ac75b139e7349a
_md5_=75e1e97ed1a0b22c90eebd09f4e46d59