diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
25 files changed, 39 insertions, 47 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 b/metadata/md5-cache/sci-biology/HTSeq-0.9.1 index 4d3ff080b6e9..23e7dd9d312c 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 +++ b/metadata/md5-cache/sci-biology/HTSeq-0.9.1 @@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_pyth REQUIRED_USE=|| ( python_targets_python3_6 ) SLOT=0 SRC_URI=mirror://pypi/H/HTSeq/HTSeq-0.9.1.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 577e2308f7b36e26062d464f59a5ee6c epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 b33fa13a5178ad9bf895a5190d20cdc7 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=1a7e20f6705425c8dc29ce2c240db0b2 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index a868ad39ffb2..466307539a7b 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -9,5 +9,5 @@ PROPERTIES=live RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( >=dev-lang/python-3.6.10:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] REQUIRED_USE=|| ( python_targets_python3_6 ) SLOT=0 -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 577e2308f7b36e26062d464f59a5ee6c epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 b33fa13a5178ad9bf895a5190d20cdc7 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=1a7e20f6705425c8dc29ce2c240db0b2 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex 11b125662ba2..0049094e3c86 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 index 9e57a9d86a52..50d5e0ea80ac 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 @@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.17-r1:2.7 >=dev- REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 151046e8d2ffc8cffc8329bbc50a686b python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=aec6d1c76d5ea621c66e803800e2b3c4 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.5 b/metadata/md5-cache/sci-biology/bcftools-1.5 index 5eaac1f4043c..3b01f32f50a5 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.5 +++ b/metadata/md5-cache/sci-biology/bcftools-1.5 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5*:= sys-libs/zlib python_targets_pytho REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.5/bcftools-1.5.tar.bz2 -_eclasses_=multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c +_eclasses_=multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c _md5_=e289371e3fec376baf8fe36c652ca521 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.9-r2 b/metadata/md5-cache/sci-biology/bcftools-1.9-r2 index 17b07aeab0fb..3781a805d051 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.9-r2 +++ b/metadata/md5-cache/sci-biology/bcftools-1.9-r2 @@ -1,14 +1,14 @@ DEFINED_PHASES=configure prepare setup -DEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) =sci-libs/htslib-1.9*:= sys-libs/zlib:= python_single_target_python3_6? ( >=dev-lang/python-3.6.10:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( >=dev-lang/python-3.7.6:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) +DEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) =sci-libs/htslib-1.9*:= sys-libs/zlib:= python_single_target_python3_6? ( >=dev-lang/python-3.6.10:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( >=dev-lang/python-3.7.7-r1:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files EAPI=7 HOMEPAGE=http://www.htslib.org IUSE=python_single_target_python3_6 python_single_target_python3_7 KEYWORDS=~amd64 ~x86 LICENSE=MIT -RDEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) =sci-libs/htslib-1.9*:= sys-libs/zlib:= python_single_target_python3_6? ( >=dev-lang/python-3.6.10:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( >=dev-lang/python-3.7.6:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) +RDEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) =sci-libs/htslib-1.9*:= sys-libs/zlib:= python_single_target_python3_6? ( >=dev-lang/python-3.6.10:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( >=dev-lang/python-3.7.7-r1:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2 -_eclasses_=multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-single-r1 151046e8d2ffc8cffc8329bbc50a686b python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c +_eclasses_=multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c _md5_=3bd4e9294012ee3e5fdd9e07796a4cc2 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0 index f1668e9cfedd..7a9ec6f06cb0 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.26.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz https://dev.gentoo.org/~mgorny/dist/bedtools-2.26.0-fix-buildsystem.patch.bz2 -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=1b65bed58bf80baf59cb7772dbdb6023 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.1 b/metadata/md5-cache/sci-biology/biopandas-0.2.1 index 349172f94032..eb597ab3d753 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.1 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_6 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.1.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 577e2308f7b36e26062d464f59a5ee6c epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 b33fa13a5178ad9bf895a5190d20cdc7 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=9aa50282a8f020366a788665165393c5 diff --git a/metadata/md5-cache/sci-biology/biopython-1.73 b/metadata/md5-cache/sci-biology/biopython-1.73 index ab061dd1c985..95209b4254ec 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.73 +++ b/metadata/md5-cache/sci-biology/biopython-1.73 @@ -1,4 +1,4 @@ -BDEPEND=python_targets_python3_6? ( >=dev-lang/python-3.6.10:3.6 ) python_targets_python3_7? ( >=dev-lang/python-3.7.6:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] +BDEPEND=python_targets_python3_6? ( >=dev-lang/python-3.6.10:3.6 ) python_targets_python3_7? ( >=dev-lang/python-3.7.7-r1:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] DEFINED_PHASES=compile configure install postinst prepare test DEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/rdflib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pygraphviz[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pydot[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/setuptools[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sys-devel/flex DESCRIPTION=Python modules for computational molecular biology @@ -7,9 +7,9 @@ HOMEPAGE=https://www.biopython.org/ https://pypi.org/project/biopython/ IUSE=python_targets_python3_6 python_targets_python3_7 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=HPND -RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/rdflib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pygraphviz[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pydot[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] python_targets_python3_6? ( >=dev-lang/python-3.6.10:3.6 ) python_targets_python3_7? ( >=dev-lang/python-3.7.6:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] +RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/rdflib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pygraphviz[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pydot[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] python_targets_python3_6? ( >=dev-lang/python-3.6.10:3.6 ) python_targets_python3_7? ( >=dev-lang/python-3.7.7-r1:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.73.tar.gz -_eclasses_=distutils-r1 577e2308f7b36e26062d464f59a5ee6c eutils fcb2aa98e1948b835b5ae66ca52868c5 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c +_eclasses_=distutils-r1 b33fa13a5178ad9bf895a5190d20cdc7 eutils fcb2aa98e1948b835b5ae66ca52868c5 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c _md5_=a7d43dcf81616b69a0167851abcbe227 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.9 b/metadata/md5-cache/sci-biology/foldingathome-7.6.9 new file mode 100644 index 000000000000..33852969643f --- /dev/null +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.9 @@ -0,0 +1,14 @@ +BDEPEND=virtual/pkgconfig +DEFINED_PHASES=config install postinst postrm setup +DEPEND=dev-util/patchelf +DESCRIPTION=Folding@Home is a distributed computing project for protein folding +EAPI=7 +HOMEPAGE=https://foldingathome.org/ +KEYWORDS=~amd64 +LICENSE=FAH-EULA-2014 FAH-special-permission +RDEPEND=app-arch/bzip2 || ( dev-libs/openssl-compat:1.0.0 =dev-libs/openssl-1.0*:* ) sys-devel/gcc sys-libs/glibc sys-libs/zlib acct-group/video +RESTRICT=mirror bindist strip +SLOT=0 +SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.9-64bit-release.tar.bz2 +_eclasses_=multilib 318e8ae683e57fd3ccd0d31a769d8ee8 systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02 +_md5_=35efc85acab21d56c5bb97f30da7e0f8 diff --git a/metadata/md5-cache/sci-biology/last-299-r1 b/metadata/md5-cache/sci-biology/last-299-r1 index a7857f11f043..7fb01355a8c9 100644 --- a/metadata/md5-cache/sci-biology/last-299-r1 +++ b/metadata/md5-cache/sci-biology/last-299-r1 @@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.17-r1:2.7 >=dev- REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0 SRC_URI=http://last.cbrc.jp/last-299.zip -_eclasses_=multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-single-r1 151046e8d2ffc8cffc8329bbc50a686b python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c +_eclasses_=multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c _md5_=ec5206661373a6ef6ad77450dfbdb915 diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050 deleted file mode 100644 index 6dbb0cd124c7..000000000000 --- a/metadata/md5-cache/sci-biology/mafft-7.050 +++ /dev/null @@ -1,11 +0,0 @@ -DEFINED_PHASES=compile install prepare test -DESCRIPTION=Multiple sequence alignments using a variety of algorithms -EAPI=5 -HOMEPAGE=https://mafft.cbrc.jp/alignment/software/index.html -IUSE=threads -KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos -LICENSE=BSD -SLOT=0 -SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf -_md5_=3195e77c5c792018208b65f5dbeab567 diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215 deleted file mode 100644 index 2e7ad20e75b5..000000000000 --- a/metadata/md5-cache/sci-biology/mafft-7.215 +++ /dev/null @@ -1,11 +0,0 @@ -DEFINED_PHASES=compile install prepare test -DESCRIPTION=Multiple sequence alignments using a variety of algorithms -EAPI=5 -HOMEPAGE=https://mafft.cbrc.jp/alignment/software/index.html -IUSE=threads -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos -LICENSE=BSD -SLOT=0 -SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf -_md5_=7b8b136195c000efff0407f671d57f19 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index f9d1b39992db..6aaf75e31f3a 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -8,4 +8,4 @@ LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz _eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf -_md5_=920a37021a0b392bb7315b63cf3de39d +_md5_=75ed445f47bb6f3b4dd4a52cb903183f diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 index c833ec62476c..c5091a550f90 100644 --- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 +++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 @@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.17-r1:2.7 >=dev- REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0 SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 estack 686eaab303305a908fd57b2fd7617800 libtool f143db5a74ccd9ca28c1234deffede96 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 151046e8d2ffc8cffc8329bbc50a686b python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 estack 686eaab303305a908fd57b2fd7617800 libtool f143db5a74ccd9ca28c1234deffede96 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c versionator 2352c3fc97241f6a02042773c8287748 _md5_=a4080439675628436c06de8db9f59c6e diff --git a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 b/metadata/md5-cache/sci-biology/pysam-0.12.0.1 index 48e53540d296..3d6f67e5c369 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 +++ b/metadata/md5-cache/sci-biology/pysam-0.12.0.1 @@ -10,5 +10,5 @@ RDEPEND==sci-libs/htslib-1.5*:= python_targets_python3_6? ( >=dev-lang/python-3. REQUIRED_USE=|| ( python_targets_python3_6 ) SLOT=0 SRC_URI=mirror://pypi/p/pysam/pysam-0.12.0.1.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 577e2308f7b36e26062d464f59a5ee6c epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 b33fa13a5178ad9bf895a5190d20cdc7 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=73a20e2f0964572bf64b569361b1235c diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 index bbecaaaa52f8..6475ef7be3e4 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 @@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.17-r1:2.7 >=dev- REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz -_eclasses_=multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-single-r1 151046e8d2ffc8cffc8329bbc50a686b python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c +_eclasses_=multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c _md5_=fa48f0b2be780a9264eb9d727ec53335 diff --git a/metadata/md5-cache/sci-biology/samtools-1.5 b/metadata/md5-cache/sci-biology/samtools-1.5 index 0fd3a9968d9b..25f365c8f20c 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.5 +++ b/metadata/md5-cache/sci-biology/samtools-1.5 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib py REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.5.tar.bz2 -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c _md5_=8d92b4a814f62eab87bac2be22c2470c diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index ebef831da000..35bfd2378a9e 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1 RESTRICT=!test? ( test ) SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz -_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=1f1cf11ee07a7961e6fa23345e516b65 diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 index e013ac236cae..ec2e860da44a 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1 RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz -_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=16bcf021b05ae673eb5878cdcefd8d8c diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0 b/metadata/md5-cache/sci-biology/seqan-2.4.0 index df1347b8d4fa..1ce2a5f10f76 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/s REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=ca34cde2b2fc2f8692469a016bc077f6 diff --git a/metadata/md5-cache/sci-biology/seqan-9999 b/metadata/md5-cache/sci-biology/seqan-9999 index 15496fd2d33c..35d5707c3aa3 100644 --- a/metadata/md5-cache/sci-biology/seqan-9999 +++ b/metadata/md5-cache/sci-biology/seqan-9999 @@ -9,5 +9,5 @@ PROPERTIES=live RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 -_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils be72eac95bd029ad1d81d5d656c3c83b desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=954c2a9b05e60f6a61eb27c1cc720117 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index 60d60c1021fc..685dabecd64a 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -10,5 +10,5 @@ RDEPEND=!sci-mathematics/cado-nfs python_single_target_python2_7? ( >=dev-lang/p REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 151046e8d2ffc8cffc8329bbc50a686b python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=98a7a2b9765ad5e245b1b7b9be67060b diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index c5824848324b..2a71bb4c8c49 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 577e2308f7b36e26062d464f59a5ee6c epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 b33fa13a5178ad9bf895a5190d20cdc7 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=1e58c830b49ced05ae9960fcc2dead13 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index 16b75bf03d2e..3dfc9282b98d 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 577e2308f7b36e26062d464f59a5ee6c epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 6f5996d2ae01e0c6f2869ed18f023239 toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 b33fa13a5178ad9bf895a5190d20cdc7 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 318e8ae683e57fd3ccd0d31a769d8ee8 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 727554821dab8292d3a8198893c2ef8b toolchain-funcs 512eb3367f507ebaa1d1d43ab7d66e6c unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=b2a6486af275e75c6365ab7eeba1e0bd |