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-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-0.12.42
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-99992
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin24074 -> 24076 bytes
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.10.22
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.29.22
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.30.02
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.2.72
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.772
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.16.0.12
-rw-r--r--metadata/md5-cache/sci-biology/stride-20011129-r14
-rw-r--r--metadata/md5-cache/sci-biology/treeviewx-0.5.1-r32
11 files changed, 11 insertions, 11 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
index 673517840e8a..2f2031ee62a6 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4
+++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
@@ -11,5 +11,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_7(-)?,python_targets_python3_8(-
REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 )
SLOT=0
SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz
-_eclasses_=distutils-r1 d8655e1387589a2e1930339b1627d5c1 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=ae9941d3e3234244619fdcb2b46c8e90
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index 77f127184374..fb1934b346a0 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -10,5 +10,5 @@ PROPERTIES=live
RDEPEND=dev-python/numpy[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 )
SLOT=0
-_eclasses_=distutils-r1 d8655e1387589a2e1930339b1627d5c1 git-r3 b8e8c92aa5fe8df7187e466138eb4e52 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb git-r3 b8e8c92aa5fe8df7187e466138eb4e52 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=ae9941d3e3234244619fdcb2b46c8e90
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index 9d3bef5454b6..5f3308572549 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.10.2 b/metadata/md5-cache/sci-biology/bcftools-1.10.2
index f209875a8053..4fab2936e347 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.10.2
+++ b/metadata/md5-cache/sci-biology/bcftools-1.10.2
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_7? ( dev-python/matplotlib[py
REQUIRED_USE=^^ ( python_single_target_python3_7 python_single_target_python3_8 python_single_target_python3_9 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2
-_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-single-r1 d25ac9d5d91fe9d44fda6ec192aca11a python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-single-r1 d25ac9d5d91fe9d44fda6ec192aca11a python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=2fd4d2217632ea38f3b2adae16fec9fb
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.29.2 b/metadata/md5-cache/sci-biology/bedtools-2.29.2
index ba8b6c687596..3042ee9e655c 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.29.2
+++ b/metadata/md5-cache/sci-biology/bedtools-2.29.2
@@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz
-_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=f3eef2425b0d021201cd5bb705836375
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0
index cee5a93733c7..2b846f164ad3 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.30.0
+++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0
@@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz
-_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=14bf1e3697276975f4e8b47a297b1bf5
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7
index 282a9ca18bca..9133765ad38f 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.2.7
+++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targe
RESTRICT=!test? ( test ) !test? ( test )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz
-_eclasses_=distutils-r1 d8655e1387589a2e1930339b1627d5c1 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=6e4b8600d4f3c3ac26b099a9c4577ca0
diff --git a/metadata/md5-cache/sci-biology/biopython-1.77 b/metadata/md5-cache/sci-biology/biopython-1.77
index d5d627bedb46..a2986910f006 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.77
+++ b/metadata/md5-cache/sci-biology/biopython-1.77
@@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_7(-)?,python_targets_python
REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 )
SLOT=0
SRC_URI=mirror://pypi/b/biopython/biopython-1.77.tar.gz
-_eclasses_=distutils-r1 d8655e1387589a2e1930339b1627d5c1 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 optfeature e142388219c7fee6ff016fe1c78a10a5 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 optfeature e142388219c7fee6ff016fe1c78a10a5 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=7f5250b5ff62ae5ff155616d0b65204b
diff --git a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
index bbb3e2b8e04d..6a5b91290ec0 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.16.0.1
+++ b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
@@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targe
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.16.0.1.tar.gz -> pysam-0.16.0.1.tar.gz
-_eclasses_=distutils-r1 d8655e1387589a2e1930339b1627d5c1 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 3ea803de86891185c7b1db2c0b5bc8c8 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
+_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4
_md5_=24cbd77fb49bf7dfa36311bf5973256d
diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1
index d5d95d9a5f0c..f1aa879f7008 100644
--- a/metadata/md5-cache/sci-biology/stride-20011129-r1
+++ b/metadata/md5-cache/sci-biology/stride-20011129-r1
@@ -6,6 +6,6 @@ KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
LICENSE=STRIDE
RESTRICT=mirror bindist
SLOT=0
-SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2
+SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~pacho/stride/stride-20060723-update.patch.bz2
_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e toolchain-funcs 24921b57d6561d87cbef4916a296ada4
-_md5_=bc953c12d4f9c873fdc6cb81f43858ad
+_md5_=817435dd944977478aa2ef74ff4b3971
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
index 2b21f73281a5..3f1f92c819f3 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/wxGTK:3.0[X]
SLOT=0
SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz
-_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic c0964e43ba712cb933da5f65b958fa88 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 multilib d410501a125f99ffb560b0c523cd3d1e toolchain-funcs 24921b57d6561d87cbef4916a296ada4 wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets 407be90c398e52298054aff2093912a3
+_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic c0964e43ba712cb933da5f65b958fa88 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 multilib d410501a125f99ffb560b0c523cd3d1e toolchain-funcs 24921b57d6561d87cbef4916a296ada4 wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets 41fd66c54c0faced4c91afc0ef1cc050
_md5_=a65777d44ca1562d5714ec2fa4c04a02
generated by cgit v1.2.3 (git 2.25.1) at 2024-06-24 13:55:11 +0000