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-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-0.12.42
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-99992
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin23612 -> 23608 bytes
-rw-r--r--metadata/md5-cache/sci-biology/amap-2.2-r42
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.10.22
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.29.22
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.30.02
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.2.72
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.772
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-2.4.42
-rw-r--r--metadata/md5-cache/sci-biology/picard-1.1032
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.16.0.12
12 files changed, 11 insertions, 11 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
index b2d7afde1249..4375328441e1 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4
+++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
@@ -11,5 +11,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
SLOT=0
SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz
-_eclasses_=distutils-r1 943c17c3afd0f811ad36a0b5c8dedba9 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 e297e8afd355d60fb9d2d7b37b81214f eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=ae9941d3e3234244619fdcb2b46c8e90
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index 66f0cddc96e7..5ac233c3b123 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -10,5 +10,5 @@ PROPERTIES=live
RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?]
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
SLOT=0
-_eclasses_=distutils-r1 943c17c3afd0f811ad36a0b5c8dedba9 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 e297e8afd355d60fb9d2d7b37b81214f eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=ae9941d3e3234244619fdcb2b46c8e90
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index 2c9c5be5108c..a19eb8b761ab 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r4 b/metadata/md5-cache/sci-biology/amap-2.2-r4
index 64b4ffa03638..e88682397d49 100644
--- a/metadata/md5-cache/sci-biology/amap-2.2-r4
+++ b/metadata/md5-cache/sci-biology/amap-2.2-r4
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 )
SLOT=0
SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz
-_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-opt-2 c9d8408eceaa8e56c729df071dd8cb57 java-utils-2 bd56fb0d459d0bad9d07fa32febe53cb ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974
+_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-opt-2 c9d8408eceaa8e56c729df071dd8cb57 java-utils-2 ac9fb9efa5413c5fb85a4203fe930e88 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974
_md5_=857434504156a8892f1335babe24f9f0
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.10.2 b/metadata/md5-cache/sci-biology/bcftools-1.10.2
index 016ed80208fa..a579262f56cd 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.10.2
+++ b/metadata/md5-cache/sci-biology/bcftools-1.10.2
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py
REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2
-_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 python-single-r1 73f113f91928e0d16bceb65ecbcd8e75 python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 73f113f91928e0d16bceb65ecbcd8e75 python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=73b8ffce0b88618f264d8ad775c675d5
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.29.2 b/metadata/md5-cache/sci-biology/bedtools-2.29.2
index ce1485e081a0..2f2eb1256180 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.29.2
+++ b/metadata/md5-cache/sci-biology/bedtools-2.29.2
@@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz
-_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 python-any-r1 901d9e22c7a848a1196502edf060f330 python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 901d9e22c7a848a1196502edf060f330 python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=f3eef2425b0d021201cd5bb705836375
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0
index 12fa8560bc95..5a490387c46e 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.30.0
+++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0
@@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz
-_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 python-any-r1 901d9e22c7a848a1196502edf060f330 python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 901d9e22c7a848a1196502edf060f330 python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=14bf1e3697276975f4e8b47a297b1bf5
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7
index 473b54832873..79f40cdb0e34 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.2.7
+++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
RESTRICT=!test? ( test ) !test? ( test )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz
-_eclasses_=distutils-r1 943c17c3afd0f811ad36a0b5c8dedba9 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 e297e8afd355d60fb9d2d7b37b81214f eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=6e4b8600d4f3c3ac26b099a9c4577ca0
diff --git a/metadata/md5-cache/sci-biology/biopython-1.77 b/metadata/md5-cache/sci-biology/biopython-1.77
index 9ddd63dca925..4ced10d375e7 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.77
+++ b/metadata/md5-cache/sci-biology/biopython-1.77
@@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
SLOT=0
SRC_URI=mirror://pypi/b/biopython/biopython-1.77.tar.gz
-_eclasses_=distutils-r1 943c17c3afd0f811ad36a0b5c8dedba9 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 e297e8afd355d60fb9d2d7b37b81214f eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=7f5250b5ff62ae5ff155616d0b65204b
diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4
index 206f03753e41..ee0cb2ff3f2f 100644
--- a/metadata/md5-cache/sci-biology/bowtie-2.4.4
+++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4
@@ -11,5 +11,5 @@ RDEPEND=python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-
REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 )
SLOT=2
SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip
-_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 python-single-r1 73f113f91928e0d16bceb65ecbcd8e75 python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 73f113f91928e0d16bceb65ecbcd8e75 python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=a169406c93e64d9cae6cbb8ad262f62b
diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103
index 343b3f47b28a..f7da6cda4047 100644
--- a/metadata/md5-cache/sci-biology/picard-1.103
+++ b/metadata/md5-cache/sci-biology/picard-1.103
@@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2
-_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-2 37e38ed0662a78bfde9cb4f6d11ed6dc java-utils-2 bd56fb0d459d0bad9d07fa32febe53cb ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974
+_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-2 37e38ed0662a78bfde9cb4f6d11ed6dc java-utils-2 ac9fb9efa5413c5fb85a4203fe930e88 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974
_md5_=09627e6bb74ee9997324bde01a56bcbd
diff --git a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
index c76c5ecd35a0..fea66eff096a 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.16.0.1
+++ b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
@@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.16.0.1.tar.gz -> pysam-0.16.0.1.tar.gz
-_eclasses_=distutils-r1 943c17c3afd0f811ad36a0b5c8dedba9 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 f5408c7f165c2c81b787182c52bc41dd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 e297e8afd355d60fb9d2d7b37b81214f eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 6551f7b3f1289e7f2956f3a1632e9d26 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=24cbd77fb49bf7dfa36311bf5973256d
generated by cgit v1.2.3 (git 2.25.1) at 2024-05-18 09:40:00 +0000