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-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-0.12.42
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-99992
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin22727 -> 22577 bytes
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.2.72
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.772
-rw-r--r--metadata/md5-cache/sci-biology/mira-4.0.2-r113
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.16.0.12
7 files changed, 5 insertions, 18 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
index 898713aad3fc..be2c39068afc 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4
+++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
@@ -11,5 +11,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
SLOT=0
SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz
-_eclasses_=distutils-r1 39fb83ed394c172aad380c33a8de287e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 252d4f554e611b0af601160a9c7be049 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=ae9941d3e3234244619fdcb2b46c8e90
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index 1e8dc8971ca1..6bfbd8e63a9d 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -10,5 +10,5 @@ PROPERTIES=live
RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?]
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
SLOT=0
-_eclasses_=distutils-r1 39fb83ed394c172aad380c33a8de287e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 252d4f554e611b0af601160a9c7be049 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=ae9941d3e3234244619fdcb2b46c8e90
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index 2d3a554847fc..00cd7583888d 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7
index 457686ff0b57..6ded1212d148 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.2.7
+++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
RESTRICT=!test? ( test ) !test? ( test )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz
-_eclasses_=distutils-r1 39fb83ed394c172aad380c33a8de287e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 252d4f554e611b0af601160a9c7be049 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=6e4b8600d4f3c3ac26b099a9c4577ca0
diff --git a/metadata/md5-cache/sci-biology/biopython-1.77 b/metadata/md5-cache/sci-biology/biopython-1.77
index 10a2ad9039e8..8eaba77da9c0 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.77
+++ b/metadata/md5-cache/sci-biology/biopython-1.77
@@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
SLOT=0
SRC_URI=mirror://pypi/b/biopython/biopython-1.77.tar.gz
-_eclasses_=distutils-r1 39fb83ed394c172aad380c33a8de287e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 252d4f554e611b0af601160a9c7be049 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=7f5250b5ff62ae5ff155616d0b65204b
diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2-r1 b/metadata/md5-cache/sci-biology/mira-4.0.2-r1
deleted file mode 100644
index ad7c78160f80..000000000000
--- a/metadata/md5-cache/sci-biology/mira-4.0.2-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=configure install postinst prepare
-DEPEND=dev-libs/boost:=[threads(+)] dev-util/google-perftools sys-devel/flex app-editors/vim-core dev-libs/expat sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.2-r1:1.16 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Illumina
-EAPI=6
-HOMEPAGE=http://www.chevreux.org/projects_mira.html
-IUSE=doc
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=dev-libs/boost:=[threads(+)] dev-util/google-perftools
-SLOT=0
-SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2
-_eclasses_=autotools c7052b276346587968d52ea8eaf5aca1 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974
-_md5_=7d807f37f8dfc41b66f293797784f472
diff --git a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
index 3189b922c80b..75642acd46a4 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.16.0.1
+++ b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
@@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.16.0.1.tar.gz -> pysam-0.16.0.1.tar.gz
-_eclasses_=distutils-r1 39fb83ed394c172aad380c33a8de287e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
+_eclasses_=distutils-r1 252d4f554e611b0af601160a9c7be049 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 655fe65f186504e455c2f3116808fda8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa
_md5_=24cbd77fb49bf7dfa36311bf5973256d