gentoo resync : 22.01.2021

2 files changed, 0 insertions, 191 deletions

diff --git a/sci-mathematics/petsc/Manifest b/sci-mathematics/petsc/Manifest
index 7e85b0742583..a272f59450a6 100644
--- a/sci-mathematics/petsc/Manifest
+++ b/sci-mathematics/petsc/Manifest
@@ -2,8 +2,6 @@ AUX petsc-3.13.0-do_not_run_mpiexec.patch 2822 BLAKE2B 6c8e8185c693fdc720c0d8ea8
 AUX petsc-3.13.0-fix_sandbox_violation.patch 1022 BLAKE2B 4883be2a38becba88dd1ceafffae46b775f75a59ce990c2d92808a52fb27e5ab89a14e355599009466be0af58680076e15ae74d82cd243b3bfe867fa90f4f05a SHA512 afd6e4ade2a53941d0211baa78e179de9c8bfead15c4c245d25623cee99fb1c0821d154e58428b3c431654d770689afdec1c2bd631f2fa8eedd99d3c7186656c
 AUX petsc-3.13.0-make_hypre_configure.patch 4055 BLAKE2B e3bc831665fbe2c9a724a13420d1ce7557b7a1a6fcd7537271a6e48622f29f71f72257d649bcbef4aa4f287a804407cdb80579797eb54cfa994ef85d5bcb617f SHA512 47e4971596342c160fc54e1bc6d9fa739ae4bf6a9e3f89659992a3548de0beacdc7ac34a900117c1ee43b6bfaa81e8a58f1c45acea072be612ece3b5d18d7f86
 AUX petsc-3.7.0-disable-rpath.patch 909 BLAKE2B b9b6064886d6c10b382982778398cb7fa254242e5ed0dfb86dd4cd6c094dc51eecfd625f6de5c2779bfc5b3beda351ac44145c69ac246d814a728d7565da8086 SHA512 8241c593d903615feb175bfe8213792ace739a18ac5f4c1d1890155ccea7de30b5ef5d97e2fa3b043e9a1e520e022abedeb038d0b4db671f89045e04edc65a68
-DIST petsc-3.13.0.tar.gz 35080264 BLAKE2B 0ac58e53751dbc6e053e3591cdf2363194e0cf7a493f252d879031e0135da16fa24e66974dd7bf07ce18558a75f8dd794e87f96590ad9e550d11edfeb462f727 SHA512 0590bb63d9c6dfd6ac03b1b88e5a8c11d42a0fd014084603d4d085060b126aa4341b4ec3a4d2b12146b971da327ccc7ede370e5633282bf44f269465aea32953
 DIST petsc-3.13.1.tar.gz 35097687 BLAKE2B fccf64fd3694deffdd0dc561069ffa7e9342fe279b5c9123edeb011df931874083839d27b7b9a0c63faea6487b104b54fd4ce68a88a074c82de91e8baaf270b0 SHA512 41c3138a6ae6c1f2d9077b464c6aeda96287e5a76849582b8f432e2ee93d2594a78ba2181eac0054a77b6165692be5f1a057049313f2be9743d4246383dfdc77
-EBUILD petsc-3.13.0.ebuild 5336 BLAKE2B 860ddcfa4620c552e483b8f581a59e11edba520a240dfa37b18c1fdf69b178b3c275c3fbbfa42b827396fb6e763cc66bb6681cc0c2612a640c4e37e176d97d9b SHA512 1116d684ea0304f07758ecd8cbebfa2f0a9e9b879fd2d22a646c51c4552fb856fdd1b543680137b4a7c44df089e07c0e6be6f90def039e8e671ed85cabde0572
 EBUILD petsc-3.13.1.ebuild 5336 BLAKE2B 860ddcfa4620c552e483b8f581a59e11edba520a240dfa37b18c1fdf69b178b3c275c3fbbfa42b827396fb6e763cc66bb6681cc0c2612a640c4e37e176d97d9b SHA512 1116d684ea0304f07758ecd8cbebfa2f0a9e9b879fd2d22a646c51c4552fb856fdd1b543680137b4a7c44df089e07c0e6be6f90def039e8e671ed85cabde0572
 MISC metadata.xml 1131 BLAKE2B db15101bb24374026158a0b45bab1b4b38ab6869bb13fc1df48eef96ca003cea0a8b9118033a3d53c735cefd5ca7563e074d458aee32e038a39e68a6a91b7364 SHA512 19cf1bcddd8bc1378bf85c47b090dd684474f29896c1877bfbeb53a24b1112ed4bb6e823cbc830ee40c886727c6c90d0852081488b1df63f8b4f071d3d453630
diff --git a/sci-mathematics/petsc/petsc-3.13.0.ebuild b/sci-mathematics/petsc/petsc-3.13.0.ebuild
deleted file mode 100644
index 6823bc877764..000000000000
--- a/sci-mathematics/petsc/petsc-3.13.0.ebuild
+++ /dev/null
@@ -1,189 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{6,7,8} )
-
-inherit flag-o-matic fortran-2 python-any-r1 toolchain-funcs
-
-DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation"
-HOMEPAGE="https://www.mcs.anl.gov/petsc/"
-SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${P}.tar.gz"
-
-LICENSE="BSD-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="afterimage boost complex-scalars cxx debug doc fftw
-	fortran hdf5 hypre mpi metis mumps scotch sparse superlu threads X"
-
-# hypre and superlu curretly exclude each other due to missing linking to hypre
-# if both are enabled
-REQUIRED_USE="
-	afterimage? ( X )
-	complex-scalars? ( !hypre !superlu )
-	hdf5? ( mpi )
-	hypre? ( cxx mpi !superlu )
-	mumps? ( mpi scotch )
-	scotch? ( mpi )
-	superlu? ( !hypre )
-"
-
-RDEPEND="
-	virtual/blas
-	virtual/lapack
-	afterimage? ( media-libs/libafterimage )
-	boost? ( dev-libs/boost )
-	fftw? ( sci-libs/fftw:3.0[mpi?] )
-	hdf5? ( sci-libs/hdf5[mpi?] )
-	hypre? ( >=sci-libs/hypre-2.18.0[mpi?] )
-	metis? ( >=sci-libs/parmetis-4 )
-	mpi? ( virtual/mpi[cxx?,fortran?] )
-	mumps? ( sci-libs/mumps[mpi?] sci-libs/scalapack )
-	scotch? ( sci-libs/scotch[mpi?] )
-	sparse? ( sci-libs/suitesparse >=sci-libs/cholmod-1.7.0 )
-	superlu? ( >=sci-libs/superlu-5 )
-	X? ( x11-libs/libX11 )
-"
-
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	virtual/pkgconfig
-	dev-util/cmake
-"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-3.7.0-disable-rpath.patch
-	"${FILESDIR}"/${PN}-3.13.0-fix_sandbox_violation.patch
-	"${FILESDIR}"/${PN}-3.13.0-make_hypre_configure.patch
-	"${FILESDIR}"/${PN}-3.13.0-do_not_run_mpiexec.patch
-)
-
-# petsc uses --with-blah=1 and --with-blah=0 to en/disable options
-petsc_enable() {
-	use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0"
-}
-# add external library:
-# petsc_with use_flag libname libdir
-# petsc_with use_flag libname include linking_libs
-petsc_with() {
-	local myuse p=${2:-${1}}
-	if use ${1}; then
-		myuse="--with-${p}=1"
-		if [[ $# -ge 4 ]]; then
-			myuse="${myuse} --with-${p}-include=${EPREFIX}${3}"
-			shift 3
-			myuse="${myuse} --with-${p}-lib=$@"
-		else
-			myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}"
-		fi
-	else
-		myuse="--with-${p}=0"
-	fi
-	echo ${myuse}
-}
-
-# select between configure options depending on use flag
-petsc_select() {
-	use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4"
-}
-
-src_configure() {
-	# bug 548498
-	# PETSc runs mpi processes during configure that result in a sandbox
-	# violation by trying to open /proc/mtrr rw. This is not easy to
-	# mitigate because it happens in libpciaccess.so called by libhwloc.so,
-	# which is used by libmpi.so.
-	addpredict /proc/mtrr
-	# if mpi is built with knem support it needs /dev/knem too
-	addpredict /dev/knem
-
-	# configureMPITypes with openmpi-2* insists on accessing the scaling
-	# governor rw.
-	addpredict /sys/devices/system/cpu/
-
-	local mylang
-	local myopt
-
-	use cxx && mylang="cxx" || mylang="c"
-	use debug && myopt="debug" || myopt="opt"
-
-	# environmental variables expected by petsc during build
-
-	export PETSC_DIR="${S}"
-	export PETSC_ARCH="linux-gnu-${mylang}-${myopt}"
-
-	if use debug; then
-		strip-flags
-		filter-flags -O*
-	fi
-
-	# C Support on CXX builds is enabled if possible i.e. when not using
-	# complex scalars (no complex type for both available at the same time)
-
-	econf \
-		scrollOutput=1 \
-		FFLAGS="${FFLAGS} -fPIC" \
-		CFLAGS="${CFLAGS} -fPIC" \
-		CXXFLAGS="${CXXFLAGS} -fPIC" \
-		LDFLAGS="${LDFLAGS}" \
-		--prefix="${EPREFIX}/usr/$(get_libdir)/petsc" \
-		--with-shared-libraries \
-		--with-single-library \
-		--with-clanguage=${mylang} \
-		$(use cxx && ! use complex-scalars && echo "with-c-support=1") \
-		--with-petsc-arch=${PETSC_ARCH} \
-		--with-precision=double \
-		--with-gnu-compilers \
-		--with-blas-lapack-lib="$($(tc-getPKG_CONFIG) --libs blas lapack)" \
-		$(petsc_enable debug debugging) \
-		$(petsc_enable mpi) \
-		$(petsc_select mpi cc mpicc $(tc-getCC)) \
-		$(petsc_select mpi cxx mpicxx $(tc-getCXX)) \
-		$(petsc_enable fortran) \
-		$(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \
-		$(petsc_enable mpi mpi-compilers) \
-		$(petsc_select complex-scalars scalar-type complex real) \
-		--with-windows-graphics=0 \
-		--with-matlab=0 \
-		--with-cmake:BOOL=1 \
-		$(petsc_enable threads pthread) \
-		$(petsc_with afterimage afterimage \
-			/usr/include/libAfterImage -lAfterImage) \
-		$(use_with hdf5) \
-		$(petsc_with hypre hypre \
-			/usr/include/hypre -lHYPRE) \
-		$(use_with sparse suitesparse) \
-		$(petsc_with superlu superlu \
-			/usr/include/superlu -lsuperlu) \
-		$(use_with X x) \
-		$(use_with X x11) \
-		$(petsc_with scotch ptscotch \
-			/usr/include/scotch \
-		[-lptesmumps,-lptscotch,-lptscotcherr,-lscotch,-lscotcherr]) \
-		$(petsc_with mumps scalapack \
-			/usr/include/scalapack -lscalapack) \
-		$(use_with mumps mumps \
-			/usr/include \
-			[-lcmumps,-ldmumps,-lsmumps,-lzmumps,-lmumps_common,-lpord]) \
-		--with-imagemagick=0 \
-		--with-python=0 \
-		$(use_with boost) \
-		$(use_with fftw)
-}
-
-src_install() {
-	emake DESTDIR="${ED}" install
-
-	# add PETSC_DIR to environmental variables
-	cat >> 99petsc <<- EOF
-		PETSC_DIR=${EPREFIX}/usr/$(get_libdir)/petsc
-		LDPATH=${EPREFIX}/usr/$(get_libdir)/petsc/lib
-	EOF
-	doenvd 99petsc
-
-	if use doc ; then
-		docinto html
-		dodoc -r docs/*.html docs/changes docs/manualpages
-	fi
-}