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authorV3n3RiX <venerix@koprulu.sector>2024-04-19 12:05:02 +0100
committerV3n3RiX <venerix@koprulu.sector>2024-04-19 12:05:02 +0100
commitb6cfc0c19effe2d9f7b8ab303cd00636f16da253 (patch)
treea0158050dac0a7ebfb9df4f667ec6ad2dd185538 /sci-libs
parent2d01b3d133c0fbf17de8d7b47905585af88bd6e4 (diff)
gentoo auto-resync : 19:04:2024 - 12:05:02
Diffstat (limited to 'sci-libs')
-rw-r--r--sci-libs/Manifest.gzbin44815 -> 44808 bytes
-rw-r--r--sci-libs/cartopy/Manifest6
-rw-r--r--sci-libs/cartopy/cartopy-0.22.0.ebuild (renamed from sci-libs/cartopy/cartopy-0.21.1.ebuild)10
-rw-r--r--sci-libs/cartopy/cartopy-0.23.0.ebuild87
-rw-r--r--sci-libs/cartopy/files/cartopy-0.23.0-backport-test-fixes.patch13
-rw-r--r--sci-libs/dsdp/Manifest1
-rw-r--r--sci-libs/dsdp/dsdp-5.8-r3.ebuild90
7 files changed, 111 insertions, 96 deletions
diff --git a/sci-libs/Manifest.gz b/sci-libs/Manifest.gz
index 6bc6e41c21a4..d07a7648f8f4 100644
--- a/sci-libs/Manifest.gz
+++ b/sci-libs/Manifest.gz
Binary files differ
diff --git a/sci-libs/cartopy/Manifest b/sci-libs/cartopy/Manifest
index b55238f95264..6cb82b979239 100644
--- a/sci-libs/cartopy/Manifest
+++ b/sci-libs/cartopy/Manifest
@@ -1,7 +1,11 @@
AUX cartopy-0.21.1-fix-test.patch 1108 BLAKE2B c88a6a68bf0c0737d31049ac2c5a24791779ccc2b29f767056796c138928b04ffea47d8989dec02ed19725527d512920f07c991eb80f1534b83bf842df48b30e SHA512 010f1c844d21c60dca18dbc5530fcbebb5da99bd4a126e6c844bcb32c55533114c53694fbfc381e9a3aecabab8d11d9fb33a826597b9b66eae30c07f304f44e6
AUX cartopy-0.21.1-fix-test_proj92.patch 5677 BLAKE2B 6ec667d840e4c7909a5c17ed858cd9dd2ea7c8022ece40cdbad00be2b36167e485864c2698969fc033c7c43882fab4b14bd8e3febeaec7c9727c3f34ad84c22f SHA512 e13235d0ee16dbb0748495fc0d697df450f9f4ea7f66845331c5dc3208f70502ebf9c7288730cdd060b20b489b0b2e729bbcb99616a2b6ddf12e42fc45427b06
AUX cartopy-0.21.1-fix-test_proj92_1.patch 2002 BLAKE2B 891615c88200d3a4ed84ecdbdc1150c82524734dc06c8240534788c0395d5e5244d9a6faeafedf174e1172fb929c36a27b9e2a2aa205293063471dc925e1218b SHA512 156704f18ca398c8327ed3a111cfd87696a0d5f7907d4e8c34ce3e0c8a99eea4930c241f88f6a9c8fe8bfab34148cbbe995a6f471332c97ad88aa0d4d9c567e0
+AUX cartopy-0.23.0-backport-test-fixes.patch 520 BLAKE2B 57edd4f30665f243a7e710f3341fae647c897aab5066adf2749fd3c084adc67a730203d29dc3c5d19b8b963ecde2c41cbfd8a5da2c82e8775161d2ee4621a1ef SHA512 701b61807388962d2be57da2b7d32a0cd0b84584119cd0772d8b2a1da15e9cf233a048c2bd3ac08bd353732f7c2ae36bf500983569c1c42fec093752a9c570bd
DIST cartopy-0.21.1.gh.tar.gz 10815884 BLAKE2B 4137f593b6ce35270f9df5016529250a07c57ec5a95843db8740eb494f55109b5129cf72153b0216e4f786771bf5cedde3caaecd40175fe9ad5c6fb65ad84788 SHA512 de1d09ee3bf6af13bcc7cc4bb1f7c13335ba67e05d2ad64efa0fb00bdb74c7e13c6fc44822d5ac1d70ee7d39b2322280c1395dc66119b9ecd94ca26014e413a1
+DIST cartopy-0.22.0.gh.tar.gz 10907762 BLAKE2B 0524efb2359f72da4e73cc74c41b03f4e335163dea4b86f5b8907b2a20521ce81a42fceebbdd7e582315b33aed0dfdf159469dfa13516c9c46a8f887f847fa21 SHA512 195cc69170c826240e03918de39925459c94c36b76f1a87b8ec3bca7c00ed577eb8c727ccda1511c0f691ac5aea043d3d02d7bfb603624548e63c9a7dc644ad5
+DIST cartopy-0.23.0.gh.tar.gz 10645484 BLAKE2B aa9306e9f5bd85ae28be4802aac1a36d67df5812e9d188ad20d27103eaff1856b7d48e256459519b4e647bdf17fc207e8473ec6ead7413db113311fe821faba6 SHA512 8f357faad592db03c564d2c87f6d1600d2a04a68b71b250925c222cea418b8588f2eb48f64d3ec7210650a34372777ef8416c8f129af7911661615759d2c60b5
EBUILD cartopy-0.21.1-r1.ebuild 2301 BLAKE2B 0cad49a11e61991c6f2eb42575769941d7944f5b1a802d894d45525ffa045b43f9491123a02f20ee7cf8faf4fa5a792c21096ce1552628542839d8a1765abe15 SHA512 ed4e5e0f66f270fb298276f222f1fc3b68a99288f7714610df7cc772586e1214fc26497e14f542496d56cf21d07922a97bfb89f256a465b76bf85d5af7836e29
-EBUILD cartopy-0.21.1.ebuild 2103 BLAKE2B 40b5cbc22d3ecae968c8e7739264ff3b80c2953d2644e2df0c5d0e82a283a74e583129dea6c4c5b381738527607dc6cc378421c9ac233831b9e55b29e4244016 SHA512 276ac9f06c63821133e8a0d6e752d7a96a09bd1ebc60acbf74825b56ef7f2e2fdad5e874611612c3889aa285348f561776bdaa9d0ac9a00b50183fd2661b3de7
+EBUILD cartopy-0.22.0.ebuild 2153 BLAKE2B 47c7563e70117d433b2d1450efa2fd21666f85d88de9ffcda0378435cb5f087549d3e688ac43706ec6c9f28cd3394de96545c8d4846b84162a2dcc063873226d SHA512 3e3cb0519d3fc86ba19ba2205d9f836b8641da8e02a7635cc8c6706fdad778dce0fc670fb652074461c16d9d069db0101c813fa14194aed8fcce7a50289c18d3
+EBUILD cartopy-0.23.0.ebuild 2193 BLAKE2B 82d5147690bbe2081793db394666cbd1ad41c68a8f18a55f7f6e555d7551273f617db996b4298a062f7436635b0b00f085b9cf3773267705082af22562e63fe7 SHA512 4afffbef0971f207444de7013d948993fac1bac211310fd5f10fa2c2f92e338638bb19023a99b49819b88329563510bfc28e11ba67c477e19855dc7dfa1f15ca
MISC metadata.xml 729 BLAKE2B 38605f8140ccae8c9edf2b5eb7bf394e9c99fd089fa998c98422967cc12d3b808d3b7901d3746da25558c9211e47deec01a3d5856176cda8a868c0151a03fed8 SHA512 f3fb714f50475c2e0f4150d20423195fffb39243aefd313e9a9d0fa834364a928a712006d6e1e1def77b902f8c349a4045d3081fe38697054e744441e622a591
diff --git a/sci-libs/cartopy/cartopy-0.21.1.ebuild b/sci-libs/cartopy/cartopy-0.22.0.ebuild
index bad3ea5841c3..cfc80da1d172 100644
--- a/sci-libs/cartopy/cartopy-0.21.1.ebuild
+++ b/sci-libs/cartopy/cartopy-0.22.0.ebuild
@@ -1,12 +1,14 @@
-# Copyright 1999-2023 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
DISTUTILS_SINGLE_IMPL=1
+DISTUTILS_EXT=1
PYTHON_COMPAT=( python3_{9..11} )
-inherit distutils-r1 multibuild multiprocessing virtualx
+DISTUTILS_USE_PEP517=setuptools
+inherit distutils-r1 multiprocessing virtualx
MY_PV=${PV/_beta/b}
MY_P=${PN}-${MY_PV}
@@ -55,8 +57,6 @@ BDEPEND="
)
"
-PATCHES=( "${FILESDIR}"/${P}-fix-test.patch )
-
EPYTEST_IGNORE=(
# Require network access, not covered by markers
lib/cartopy/tests/mpl/test_crs.py
@@ -72,6 +72,8 @@ python_prepare_all() {
export MPLCONFIGDIR="${T}"
echo "backend : Agg" > "${MPLCONFIGDIR}"/matplotlibrc || die
+ sed -i -e "s/exclude =/#exclude =/" pyproject.toml || die
+
distutils-r1_python_prepare_all
}
diff --git a/sci-libs/cartopy/cartopy-0.23.0.ebuild b/sci-libs/cartopy/cartopy-0.23.0.ebuild
new file mode 100644
index 000000000000..024cbd93e090
--- /dev/null
+++ b/sci-libs/cartopy/cartopy-0.23.0.ebuild
@@ -0,0 +1,87 @@
+# Copyright 1999-2024 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_SINGLE_IMPL=1
+DISTUTILS_EXT=1
+PYTHON_COMPAT=( python3_{9..12} )
+
+DISTUTILS_USE_PEP517=setuptools
+inherit distutils-r1 multiprocessing virtualx
+
+MY_PV=${PV/_beta/b}
+MY_P=${PN}-${MY_PV}
+
+DESCRIPTION="Python package for geospatial data processing and analysis"
+HOMEPAGE="https://scitools.org.uk/cartopy"
+SRC_URI="https://github.com/SciTools/${PN}/archive/v${MY_PV}.tar.gz -> ${P}.gh.tar.gz"
+S="${WORKDIR}"/${MY_P}
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="test"
+RESTRICT="!test? ( test )"
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="
+ ${PYTHON_DEPS}
+ sci-libs/gdal[python,${PYTHON_SINGLE_USEDEP}]
+ $(python_gen_cond_dep '
+ >=dev-python/numpy-1.19[${PYTHON_USEDEP}]
+ dev-python/shapely[${PYTHON_USEDEP}]
+ dev-python/six[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ dev-python/pillow[jpeg,${PYTHON_USEDEP}]
+ dev-python/pyproj[${PYTHON_USEDEP}]
+ sci-libs/pyshp[${PYTHON_USEDEP}]
+ ')
+"
+DEPEND="${RDEPEND}"
+BDEPEND="
+ $(python_gen_cond_dep '
+ dev-python/setuptools-scm[${PYTHON_USEDEP}]
+ dev-python/cython[${PYTHON_USEDEP}]
+ ')
+ test? (
+ $(python_gen_cond_dep '
+ dev-python/filelock[${PYTHON_USEDEP}]
+ dev-python/mock[${PYTHON_USEDEP}]
+ dev-python/flufl-lock[${PYTHON_USEDEP}]
+ dev-python/pytest-mpl[${PYTHON_USEDEP}]
+ dev-python/pytest-xdist[${PYTHON_USEDEP}]
+ ')
+ )
+"
+PATCHES=(
+ "${FILESDIR}"/${P}-backport-test-fixes.patch
+)
+
+EPYTEST_IGNORE=(
+ # Require network access, not covered by markers
+ lib/cartopy/tests/mpl/test_crs.py
+ lib/cartopy/tests/mpl/test_gridliner.py
+)
+
+distutils_enable_tests pytest
+
+python_prepare_all() {
+ export SETUPTOOLS_SCM_PRETEND_VERSION=${PV}
+
+ # Prepare matplotlib backend for test suite
+ export MPLCONFIGDIR="${T}"
+ echo "backend : Agg" > "${MPLCONFIGDIR}"/matplotlibrc || die
+
+ sed -i -e "s/exclude =/#exclude =/" pyproject.toml || die
+
+ distutils-r1_python_prepare_all
+}
+
+python_test() {
+ cd "${BUILD_DIR}" || die
+
+ # Drop all tests needing network access
+ virtx epytest -n "$(makeopts_jobs)" -m "not network and not natural_earth" || die "test failed"
+}
diff --git a/sci-libs/cartopy/files/cartopy-0.23.0-backport-test-fixes.patch b/sci-libs/cartopy/files/cartopy-0.23.0-backport-test-fixes.patch
new file mode 100644
index 000000000000..b88d4110dd6f
--- /dev/null
+++ b/sci-libs/cartopy/files/cartopy-0.23.0-backport-test-fixes.patch
@@ -0,0 +1,13 @@
+# backport last test fix just after v0.23 release
+diff --git a/lib/cartopy/tests/mpl/test_gridliner.py b/lib/cartopy/tests/mpl/test_gridliner.py
+index 7d82178..d07573e 100644
+--- a/lib/cartopy/tests/mpl/test_gridliner.py
++++ b/lib/cartopy/tests/mpl/test_gridliner.py
+@@ -496,6 +496,7 @@ def test_gridliner_count_draws():
+ mocked.assert_called_once()
+
+
++@pytest.mark.natural_earth
+ @pytest.mark.mpl_image_compare(
+ baseline_dir='baseline_images/mpl/test_mpl_integration',
+ filename='simple_global.png')
diff --git a/sci-libs/dsdp/Manifest b/sci-libs/dsdp/Manifest
index f0519c240062..f51571ebb4cc 100644
--- a/sci-libs/dsdp/Manifest
+++ b/sci-libs/dsdp/Manifest
@@ -2,6 +2,5 @@ AUX dsdp-5.8-gold.patch 342 BLAKE2B a0cc333fed3f2b1ebdeccc439c0b98f9956bc64ac105
AUX dsdp-5.8-malloc.patch 212 BLAKE2B d030d01bc49aa275c2f0eed48c1808e17877120587dedcf72fb07f737e44953df8c28d2ba6a5a443b372f56c036f9f44e1841a209b383ddab892ff8ef4e0f01d SHA512 a4c324beadb7298c9c8709115c83975d10b359b792042047439631f478fc99648b9348715645cd34d893fe9b6b49b6ba8e628771cde0e007eb0b1f474dd1fd7f
AUX dsdp-5.8-readsdpa.patch 495 BLAKE2B 538ca4b9986cb5ed74ecb8510f8de23ecace871111140d394ae982e9932b9a733f2355199deb28cdf88addd0e18939b6a4e22b737a65438dc12e0a36e93d885c SHA512 43b329526f3b7d4761f7dfa44d62f94a843491bf9998f2f839edc880cdd8d04d1c8c7187213eda887025a9f3cdbff19afba6720cd2d70580b0e2dcb9512f8f90
DIST DSDP5.8.tar.gz 2608518 BLAKE2B d464db2956080a33c300520ed291e1b45aeedd28378d5aab753977688bfe74d953f1d40a7aa10c2af8b70808d97dc5ece0c98d2795f707a9a3d2128302658286 SHA512 0a32a34e33dcac151e95ed0f8cee62603bbe2b4ba1e448bba35324fe576376cb33c15908cde61ae5a7c0dcdea945f1ec544f19b3dd36524158573260182e080e
-EBUILD dsdp-5.8-r3.ebuild 2378 BLAKE2B c2784ecc2ad26007e429f0d56c4970e2d8a193fd6361d1a126d17bf56ea270910eb6fb29763f6ccd4dc3ff8eabb0fd6db07d92ea2e44880a65f218692f1cb26f SHA512 caee48d512e128819b3ab89436817dba8717e56d260d7729f7b9ffd0ceccee351b1fad871a13cec6215a06c1735dd3cf5e278fc7466583db647467c3da1786da
EBUILD dsdp-5.8-r4.ebuild 2348 BLAKE2B 11a061fd889bd1ccb98490ec5b26dd0c3a9ce0b5b280380602100c0f1054c18fe06fd9c38be617937354deca4cca969f3aaba8fb6ca48cf2a60352a5c1b6e201 SHA512 de7b3a461173bc55c3011960287c218b7ad3de2d921e1d3acbc267a47197c20ec19f2092d9ad855ae63cb76b975e0adda9000c6123233bd2988763f8da8ce4a4
MISC metadata.xml 1247 BLAKE2B a16963bce23be7c86668f69d4f7da2eddbafa59aca0f7c02624dde51a87a79f8cab972509ff63aee66cde41767f91181e0f67310fc2e08f52eba8cf31aebf102 SHA512 357a53f66ebafc58279b6af27d833ca154805bcf626c7d719c3041ed701609b509ee35e393e7218fe54e97aef6873b4484367daed861f6a17cb563d9a4dcaad3
diff --git a/sci-libs/dsdp/dsdp-5.8-r3.ebuild b/sci-libs/dsdp/dsdp-5.8-r3.ebuild
deleted file mode 100644
index 6ddc6b9b3640..000000000000
--- a/sci-libs/dsdp/dsdp-5.8-r3.ebuild
+++ /dev/null
@@ -1,90 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit multilib toolchain-funcs versionator
-
-MY_P="${PN^^}${PV}"
-
-DESCRIPTION="Software for interior-point for semidefinite programming"
-HOMEPAGE="https://www.mcs.anl.gov/hs/software/DSDP/"
-SRC_URI="https://www.mcs.anl.gov/hs/software/DSDP/${MY_P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos"
-IUSE="doc examples"
-
-RDEPEND="virtual/lapack"
-DEPEND="${RDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
- "${FILESDIR}"/${P}-readsdpa.patch
- "${FILESDIR}"/${P}-malloc.patch
- "${FILESDIR}"/${P}-gold.patch
-)
-
-make_shared_lib() {
- local soname=$(basename "${1%.a}")$(get_libname $(get_major_version))
- local cflags=()
-
- if [[ ${CHOST} == *-darwin* ]] ; then
- cflags+=(
- "-Wl,-install_name"
- "-Wl,${EPREFIX}/usr/$(get_libdir)/${soname}"
- )
- else
- cflags+=(
- "-shared" "-Wl,-soname=${soname}"
- "-Wl,--whole-archive" "${1}" "-Wl,--no-whole-archive"
- )
- fi
- einfo "Making ${soname}"
- ${2:-$(tc-getCC)} ${LDFLAGS} \
- "${cflags[@]}" \
- -o $(dirname "${1}")/"${soname}" \
- -lm $($(tc-getPKG_CONFIG) --libs blas lapack) || return 1
-}
-
-src_prepare() {
- default
- # to do proper parallel compilation
- while IFS="" read -d $'\0' -r file; do
- sed -i -e 's:make :$(MAKE) :g' "${file}" || die
- done < <(find . -name Makefile -print0)
- sed -i -e 's:make clean:$(MAKE) clean:g' make.include || die
- sed -i \
- -e "s|#\(DSDPROOT[[:space:]]*=\).*|\1${S}|" \
- -e "s|\(CC[[:space:]]*=\).*|\1$(tc-getCC)|" \
- -e "s|\(OPTFLAGS[[:space:]]*=\).*|\1${CFLAGS}|" \
- -e "s|\(CLINKER[[:space:]]*=\).*|\1 \${CC} ${LDFLAGS}|" \
- -e "s|\(LAPACKBLAS[[:space:]]*=\).*|\1 $($(tc-getPKG_CONFIG) --libs blas lapack)|" \
- -e "s|\(^ARCH[[:space:]]*=\).*|\1$(tc-getAR) cr|" \
- -e "s|\(^RANLIB[[:space:]]*=\).*|\1$(tc-getRANLIB)|" \
- make.include || die
-}
-
-src_compile() {
- emake OPTFLAGS="${CFLAGS} -fPIC" dsdplibrary
- make_shared_lib lib/lib${PN}.a || die "doing shared lib failed"
-}
-
-src_test() {
- emake -j1 example test
-}
-
-src_install() {
- dolib.so lib/lib${PN}$(get_libname $(get_major_version))
- dosym lib${PN}$(get_libname $(get_major_version)) \
- /usr/$(get_libdir)/lib${PN}$(get_libname)
-
- doheader include/*.h src/sdp/*.h
-
- use doc && DOCS+=( docs/*.pdf )
- use examples && DOCS+=( examples/. )
- einstalldocs
-}