gentoo resync : 25.11.2020

4 files changed, 120 insertions, 0 deletions

diff --git a/sci-libs/scikit-image/Manifest b/sci-libs/scikit-image/Manifest
new file mode 100644
index 000000000000..9af2f6832b4c
--- /dev/null
+++ b/sci-libs/scikit-image/Manifest
@@ -0,0 +1,5 @@
+DIST scikit-image-0.13.0.tar.gz 26101533 BLAKE2B c28284f64abd58c7bafa8f5f0c781496e8bb28af79c5c730df7cbf2fede958eb88ea420fd7f89e7b8d0d91719a98dd0935af3b2cc50fe501cc8d8d1d0ee56cb9 SHA512 923015e373c406ae2fbbfdf83ce8b91e83790bdf7842c4439fdc9fd58cffe46efc0cfc7a1b0b06e1b2d092a909a6f085335640850883e7608dbccd1074046550
+DIST scikit-image-0.17.2.tar.gz 29818001 BLAKE2B 360c5f8c23b8441d145029c09a3b1d1407d4103463497c63274583e6c03d1fc57baa3e6c53909cfaa5daba54d5909fc106e84dc7036f0240ad8de93804ef9f65 SHA512 3ca2511f03d533ac7f1850d72de396dc5493831bce6200f30d426c3f47eff9b25ec9b69e141100dc56e03f2310aab255f92ff4aff8bc7b80d15d669cbe2ebb5e
+EBUILD scikit-image-0.13.0-r1.ebuild 1738 BLAKE2B abf1e5df1eff25fddc3df6adeb9c8a2b289f9f51a8093318e7f0d0bad8d178b358377663f5a40cc0544765ee52f173222ffe3a342e41f212c2a6516e895393bf SHA512 50efaa381c1093a0e9602a4330253f44f46c56a993a6371527ab07dc987ee25b33cb7266894a3be9548b2e76616bb196e3c6cdabf83c33279c3d2165c06b850b
+EBUILD scikit-image-0.17.2.ebuild 1217 BLAKE2B ad8cee397fb0f4b3e906c08f63ef6b83b2932b0b77d230b3872ceae08a970e925a2eecd60e3d981656877210f22ec1dc65d0f66a638e034a9916dca7f7377a36 SHA512 3af9fcbdcd231564dc42df1feed4ef27d1e4064e4da0e9d6819c16895a6639b516a3939abb636097e14538d8a06fa27520f63aeab4883e3c5a72796e2eac40a2
+MISC metadata.xml 841 BLAKE2B d8e9c6247c250b668c91ef9341c9bd0c4d7a7c479530b02d2b05f2691a7d554e16cf744fd8e9fad919902a182a24bdcbf8aae890c58fccdbeb3a65116d7f9e5c SHA512 5e5ddb5f65b1e5b5a260af23bacc67775af9226fc97518d8146e05c922ae53e5863261a79382572920135e5ec70f1e5f083bbd7dadc9e9f899954baab67926da
diff --git a/sci-libs/scikit-image/metadata.xml b/sci-libs/scikit-image/metadata.xml
new file mode 100644
index 000000000000..aa3d4f7f7fb5
--- /dev/null
+++ b/sci-libs/scikit-image/metadata.xml
@@ -0,0 +1,21 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="project">
+    <email>sci@gentoo.org</email>
+    <name>Gentoo Science Project</name>
+  </maintainer>
+  <longdescription lang="en">
+    This SciKit (toolkit for SciPy) includes useful image processing
+    algorithms for use with Python and NumPy. While SciPy’s ndimage
+    provides low-level manipulation, scikits.image centres around
+    algorithms and applications.
+  </longdescription>
+  <use>
+    <flag name="freeimage">Enable support for image i/o via<pkg>media-libs/freeimage</pkg></flag>
+    <flag name="pyamg">Enable support for algebraic solvers via <pkg>dev-python/pyamg</pkg></flag>
+  </use>
+  <upstream>
+    <remote-id type="pypi">scikit-image</remote-id>
+  </upstream>
+</pkgmetadata>
diff --git a/sci-libs/scikit-image/scikit-image-0.13.0-r1.ebuild b/sci-libs/scikit-image/scikit-image-0.13.0-r1.ebuild
new file mode 100644
index 000000000000..0db4ea687ed1
--- /dev/null
+++ b/sci-libs/scikit-image/scikit-image-0.13.0-r1.ebuild
@@ -0,0 +1,53 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6,7} )
+
+inherit distutils-r1 optfeature virtualx
+
+DESCRIPTION="Image processing routines for SciPy"
+HOMEPAGE="https://scikit-image.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc freeimage pyamg test"
+RESTRICT="!test? ( test )"
+
+RDEPEND="
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/pillow[${PYTHON_USEDEP}]
+	dev-python/pywavelets[${PYTHON_USEDEP}]
+	dev-python/six[${PYTHON_USEDEP}]
+	dev-python/scipy[sparse,${PYTHON_USEDEP}]
+	freeimage? ( media-libs/freeimage )
+	pyamg? ( dev-python/pyamg[${PYTHON_USEDEP}] )"
+DEPEND="${RDEPEND}
+	>=dev-python/cython-0.23[${PYTHON_USEDEP}]
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? (	dev-python/nose[${PYTHON_USEDEP}] )"
+
+DOCS=( CONTRIBUTORS.txt DEPENDS.txt RELEASE.txt TASKS.txt TODO.txt )
+
+python_test() {
+	distutils_install_for_testing
+	cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
+	echo "backend : Agg" > matplotlibrc || die
+	#echo "backend.qt4 : PyQt4" >> matplotlibrc || die
+	#echo "backend.qt4 : PySide" >> matplotlibrc || die
+	MPLCONFIGDIR=. virtx nosetests --exe -v skimage
+}
+
+pkg_postinst() {
+	optfeature "FITS io capability" dev-python/astropy
+	optfeature "GTK" dev-python/pygtk
+	optfeature "Parallel computation" dev-python/dask
+	# not in portage yet
+	#optfeature "io plugin providing a wide variety of formats, including specialized formats using in medical imaging." dev-python/simpleitk
+	#optfeature "io plugin providing most standard formats" dev-python/imread
+}
diff --git a/sci-libs/scikit-image/scikit-image-0.17.2.ebuild b/sci-libs/scikit-image/scikit-image-0.17.2.ebuild
new file mode 100644
index 000000000000..d88534989efb
--- /dev/null
+++ b/sci-libs/scikit-image/scikit-image-0.17.2.ebuild
@@ -0,0 +1,41 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..9} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+inherit distutils-r1 optfeature
+
+DESCRIPTION="Image processing routines for SciPy"
+HOMEPAGE="https://scikit-image.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+	dev-python/imageio[${PYTHON_USEDEP}]
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/pillow[${PYTHON_USEDEP}]
+	dev-python/pywavelets[${PYTHON_USEDEP}]
+	dev-python/scipy[sparse,${PYTHON_USEDEP}]
+"
+DEPEND="${RDEPEND}
+	dev-python/cython[${PYTHON_USEDEP}]
+	dev-python/setuptools[${PYTHON_USEDEP}]
+"
+
+DOCS=( CONTRIBUTORS.txt RELEASE.txt )
+
+pkg_postinst() {
+	optfeature "FITS io capability" dev-python/astropy
+	optfeature "GTK" dev-python/pygtk
+	optfeature "Parallel computation" dev-python/dask
+	optfeature "io plugin providing most standard formats" dev-python/imread
+	# not in portage yet
+	#optfeature "io plugin providing a wide variety of formats, including specialized formats using in medical imaging." dev-python/simpleitk
+}