gentoo auto-resync : 10:02:2024 - 23:34:33

3 files changed, 136 insertions, 0 deletions

diff --git a/sci-libs/linbox/Manifest b/sci-libs/linbox/Manifest
index 95fa12ff498c..126b2b7831eb 100644
--- a/sci-libs/linbox/Manifest
+++ b/sci-libs/linbox/Manifest
@@ -1,4 +1,7 @@
 AUX linbox-1.6.3-pc.patch 1082 BLAKE2B 7d5b055c0622b61245f193eb39d7e52951262c56456dceba5b3e72f54add82b2fc1660c4590eba2c4a97009bd78119893bfccb0909ed5374752f4bf563e75655 SHA512 5739738de34c28fb9970a869ee97a6ab528fd48e3f8b3d82f39966959fa97d6076a44263678d25c06bea3c46e06c8869ba4ea94484d5b57aee3a302df49fd06b
+AUX linbox-1.7.0-hardened-testfails.patch 702 BLAKE2B df20b35fc72d67079fbd76da90b4ea4d0bf23da401929dc7b8e6c64acb380a3a8ca1d88728be568a3c72413351d013022c42c6e2b78e737f106160e607097160 SHA512 3b60caa03d2254b8d6ceadd92498bfddef1ac6ecc37d520ee2ed3f417c5f6b6982008455a03ec2a894f63fc4ec1ca3b3f189babf1d26e48ecae2bd3d5d8fb0d8
 DIST linbox-1.6.3.tar.gz 1968034 BLAKE2B 55fb83db7da375d8d97f2567c6a120ac48fefc41eb02db68152cc32f1f16009b8c8108a07bbc68087ad2ef3279108db61b48b805c9ce39f4c5f0072ab6e96304 SHA512 ccef3b4c7b9d8f999e5e4ce4e544f22cd869154513827501ecb7e1abf132ff585dfb3315cced963abe842feecda9331dda9081efb3948987365d338223a8305c
+DIST linbox-1.7.0.tar.gz 2258420 BLAKE2B a416e7ab138c6f3f4778a00c0c1eb46aa0a5b26d84f19a2df93e9f8959d3237e5f298f8013f9414f66605c08eebd7d632f71dcdef7080c8df814afcd2de34456 SHA512 cb4e848186d1f6357f498d1e3bda6484b4c789c02440f9614a227a2ae206a31fb20b32be40bda74da3f2f8f981bbd58d80fc97c95499b5151bb06eafb867ef9e
 EBUILD linbox-1.6.3-r2.ebuild 3960 BLAKE2B 1f730cba36d545e7971fe77bdf1e5a6237b5902390dc42cd387f16f5749a5a4d08fbead53d266105cf29bb5dcb5c5dc67783c51a603cb3454345f194276693f4 SHA512 308ff8895f27fc62d7c8fa84fa39850045c2d6443f2c1d2b46b52faaac89f6acd3876ed573ebc36c7f21e2b483bd71af085b3579c6f717136025e20596afcd51
+EBUILD linbox-1.7.0.ebuild 3495 BLAKE2B dbff2b303f077325ff710a6e47c1f80125432c2d5ab3bb941eb4b7f520c8925ea5213494999b4568b8bd26484ce64260424d5eb01691a899e5655c658ed2d828 SHA512 985806a05ec6f3b41dcb59dbb3c121f0da67e974ab0f421e8770bb38346ab009ea8ff2c9239a175eee7cc74c5bc1355bc3650b9ffe71a1a5135988cfea0748fb
 MISC metadata.xml 1177 BLAKE2B 57f2c859e73b86a679ba4e1ce568f006761799de57786b9fc60ac5d6a96641d39a6e51b04a86d802d3551ce38da8ff1c7eeb28f8831b605de3e5c786b0e7614e SHA512 78897bcff7d41ebcf9a0e521149cd90cb42234419b295738cf1881acf3f157cf935ad8b0de9e464fc99961831e8f0c0a31561b1bb42a2283f16ce646203f4774
diff --git a/sci-libs/linbox/files/linbox-1.7.0-hardened-testfails.patch b/sci-libs/linbox/files/linbox-1.7.0-hardened-testfails.patch
new file mode 100644
index 000000000000..9e46faa69dc4
--- /dev/null
+++ b/sci-libs/linbox/files/linbox-1.7.0-hardened-testfails.patch
@@ -0,0 +1,22 @@
+https://github.com/linbox-team/linbox/issues/304
+
+diff --git a/tests/Makefile.am b/tests/Makefile.am
+index d870aa9..f7234ea 100644
+--- a/tests/Makefile.am
++++ b/tests/Makefile.am
+@@ -57,7 +57,6 @@ EXTRA_DIST = \
+ BASIC_TESTS =            \
+     test-solve          \
+     test-solve-full             \
+-    test-smith-form-valence  \
+     test-local-smith-form-sparseelim\
+     test-smith-form             \
+     test-smith-form-adaptive     \
+@@ -66,7 +65,6 @@ BASIC_TESTS =            \
+     test-last-invariant-factor  \
+     test-qlup                    \
+     test-det            \
+-    test-regression        \
+     test-regression2       \
+     test-rank-ex        \
+     test-rank-u32        \
diff --git a/sci-libs/linbox/linbox-1.7.0.ebuild b/sci-libs/linbox/linbox-1.7.0.ebuild
new file mode 100644
index 000000000000..0745edcc409b
--- /dev/null
+++ b/sci-libs/linbox/linbox-1.7.0.ebuild
@@ -0,0 +1,111 @@
+# Copyright 1999-2024 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit autotools toolchain-funcs
+
+DESCRIPTION="C++ template library for integer and finite-field linear algebra"
+HOMEPAGE="https://linalg.org/"
+SRC_URI="https://github.com/linbox-team/${PN}/releases/download/v${PV}/${P}.tar.gz"
+
+# I think only macros/libtool.m4 (and COPYING) is GPL-2+; the source
+# headers all say LGPL-2.1
+LICENSE="GPL-2+ LGPL-2.1"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos"
+IUSE="doc opencl openmp"
+
+BDEPEND="doc? ( app-text/doxygen )"
+
+# The project README says that gmp, givaro, and blas/lapack are required
+# transitively via fflas-ffpack, but that's not true. The build system
+# checks for them, and `git grep` shows that they're used directly.
+DEPEND="dev-libs/gmp[cxx(+)]
+	=sci-libs/givaro-4.2*
+	=sci-libs/fflas-ffpack-2.5*
+	virtual/cblas
+	virtual/lapack
+	opencl? ( virtual/opencl )
+	dev-libs/ntl:=
+	sci-libs/iml
+	dev-libs/mpfr:=
+	sci-mathematics/flint"
+
+# Use mathjax to render inline latex rather than requiring a working latex
+# installation to generate bitmaps.
+RDEPEND="${DEPEND}
+	doc? ( >=dev-libs/mathjax-3 )
+"
+
+PATCHES=( "${FILESDIR}/${P}-hardened-testfails.patch" )
+
+# The --enable-openmp flag has been removed upstream, but we don't want
+# openmp support to disappear after the package has been compiled with
+# it, so we retain the USE flag and the toolchain check.
+pkg_pretend() {
+	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
+}
+
+pkg_setup() {
+	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
+}
+
+src_prepare() {
+	default
+
+	if use doc; then
+		# Avoid the need for a working LaTeX installation. MathJax does
+		# slow down the browser a bit but it also renders much more
+		# nicely than the latex-generated bitmaps would.
+		echo "
+			USE_MATHJAX = YES
+			MATHJAX_VERSION = MathJax_3
+			MATHJAX_RELPATH = \"${EPREFIX}/usr/share/mathjax\"
+			MATHJAX_EXTENSIONS = ams
+		" >> doc/Doxyfile.mod || die
+	fi
+
+	eautoreconf
+}
+
+src_configure() {
+	#
+	# The --with-all flag includes,
+	#
+	#   --with-givaro: used for finite fields, integer, etc. (required)
+	#   --with-fflas-ffpack:  small field dense linear algebra (required)
+	#   --with-ntl: used for finite field, polynomial arithmetic (optional)
+	#   --with-iml: used for fast integer/rational linear algebra (optional)
+	#   --with-mpfr: not sure, doesn't seem to be used? (optional)
+	#   --with-flint: used in algorithms/matrix-blas3 once (optional)
+	#   --with-fplll: an fplll interface not directly used (optional)
+	#   --with-doxygen: needed with --enable-doc to build them (optional)
+	#
+	# Some of these could be behind USE flags, but the ./configure output
+	# says that they're "not yet mandatory," which makes me think we might
+	# be overcomplicating things to make them optional right now.
+	#
+	econf \
+		--with-docdir="${EPREFIX}/usr/share/doc/${PF}" \
+		--with-all="${EPREFIX}"/usr \
+		--without-fplll \
+		--without-archnative \
+		$(use_enable doc) \
+		$(use_with opencl ocl)
+}
+
+src_install() {
+	default
+	find "${ED}" -name '*.la' -delete || die
+	if use doc; then
+		# These files are used for incremental doxygen builds but aren't
+		# part of the final output. Check on
+		#
+		#   https://github.com/linbox-team/linbox/issues/252
+		#
+		# periodically to see if this is pointless.
+		find "${ED}/usr/share/doc/${PF}" -type f -name '*.md5' -delete || die
+		find "${ED}/usr/share/doc/${PF}" -type f -name '*.map' -delete || die
+	fi
+}