diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
| commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
| tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-libs/libgenome/files | |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-libs/libgenome/files')
| -rw-r--r-- | sci-libs/libgenome/files/libgenome-1.3-fix-c++14.patch | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/sci-libs/libgenome/files/libgenome-1.3-fix-c++14.patch b/sci-libs/libgenome/files/libgenome-1.3-fix-c++14.patch new file mode 100644 index 000000000000..ffe30ef91fa2 --- /dev/null +++ b/sci-libs/libgenome/files/libgenome-1.3-fix-c++14.patch @@ -0,0 +1,30 @@ +Fix building with C++14, which errors out due to collisions with internal abs() function. +See also: https://bugs.gentoo.org/show_bug.cgi?id=594372 + +--- a/libGenome/gnDefs.h ++++ b/libGenome/gnDefs.h +@@ -175,13 +175,6 @@ +
+ #define CONTIG_SECTION_SIZE 3
+
+-// some compilers don't have abs() for 64 bit ints
+-#if (defined(__GNUG__) && ( __GNUC__ <= 2 )) || defined(__INTEL_COMPILER) || (defined _MSC_VER && defined __cplusplus)
+-
+-int64 abs( int64 a );
+-
+-#endif
+-
+ #ifdef __cplusplus
+ namespace genome {
+ #endif
+--- a/libGenome/Makefile.am ++++ b/libGenome/Makefile.am +@@ -29,7 +29,7 @@ + gnGenomeSpec.cpp gnLocation.cpp \ + gnRAWSource.cpp gnBaseFeature.cpp gnSEQSource.cpp gnSequence.cpp \ + gnContigSpec.cpp gnSourceHeader.cpp gnException.cpp \ +-gnFastTranslator.cpp gnPosSpecificTranslator.cpp gnDefs.cpp ++gnFastTranslator.cpp gnPosSpecificTranslator.cpp + + library_includedir=$(includedir)/$(GENERIC_LIBRARY_NAME)-$(GENERIC_API_VERSION)/$(GENERIC_LIBRARY_NAME) + |