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authorV3n3RiX <venerix@redcorelinux.org>2020-12-14 13:26:14 +0000
committerV3n3RiX <venerix@redcorelinux.org>2020-12-14 13:26:14 +0000
commit6abbf81ef2f298e3221ff5e67a1f3c5f23958212 (patch)
tree25413d1cb3a0cbfe36029db32398c0f333609215 /sci-libs/htslib
parent9c417bacd51da6d8b57fa9f37425161d30d4b95b (diff)
gentoo resync : 14.12.2020
Diffstat (limited to 'sci-libs/htslib')
-rw-r--r--sci-libs/htslib/Manifest2
-rw-r--r--sci-libs/htslib/htslib-1.9.ebuild45
2 files changed, 0 insertions, 47 deletions
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest
index 3f1f8ecec673..951f79f551cc 100644
--- a/sci-libs/htslib/Manifest
+++ b/sci-libs/htslib/Manifest
@@ -1,5 +1,3 @@
DIST htslib-1.10.2.tar.bz2 1306320 BLAKE2B f877bd9c160921f498f4160f687094a1a369732bc9f61cd94a3c9ca311fa9f865505a205e38e0d348a1010b627f1ef07b590cd7e69c945df1d804133b17b2fd1 SHA512 3ecb83b0abccf731cd42b889e352e10dd922524f6e78bcafb04f8c6c71457b0dc1f5f22690b36f03cce7d97a6a905db286243ef4858138068dcac368e4ae1075
-DIST htslib-1.9.tar.bz2 1178859 BLAKE2B a0229313d3572717101f4f23d39fa124f3bb38d8b2e65055f4f801dbb5f1549df95115e8beadd8fa024171b3ff8a874d20087bf71819c36700666f168dbe41ab SHA512 ddb0e2d970e4c2c27e203b064898f95cb7c187cd497c02fc7b4312dcea25669d0b6063d537687521e7a065f6daefa1ae897add2df4981037a187b499d08fdef7
EBUILD htslib-1.10.2.ebuild 1041 BLAKE2B 12d35fa9397f441d9e1ee444abca8c56cf87bf16aa2b82b0d6d0bad6ec27546dccdb4b540eaca322f5208eb7c0a6b9f6de5cfa8762641d73a3f40fd8bee5ea47 SHA512 99c54c20f1f01fc243bc7cb25325265e1d959fdc23a3d2db4c2cef29fb9f74cc423835a25d9f5fa1b5af027413caeb6ee8fff2f517ae2dbe8119b80c504b87d9
-EBUILD htslib-1.9.ebuild 943 BLAKE2B 7aafc2a82f264c4bffc1fc527f41ee336bba5b92b02c0a7e5dd3ed752b24fe3f398a375b159a1f6d9630af05b73815cb7bf748a6637cceac13cc13006daaceec SHA512 f865568b71ccda72f1c40622dc51f5e7bba5c9f958d1c7f5637373241655c9d013d2e454f39ca4a803f1ed6d6303b4b6f33df388046b400a1a656d50d8fa9ced
MISC metadata.xml 349 BLAKE2B 0a67c5034cea0b990b01f90cf319622a73d2c8c23b89d207f013f1ac27fbfd2f267f4d0a8d331b9ab9de792cea9914671cfb2568a56fc09aeec890f69934e943 SHA512 9108691a0c4c68ececa5e93d1719b4a6fc42c423c0b7dca3c037007873a40c86a44610c54139c6868391bb903d509b0202a87640d7114815d07ef62e478ffce7
diff --git a/sci-libs/htslib/htslib-1.9.ebuild b/sci-libs/htslib/htslib-1.9.ebuild
deleted file mode 100644
index ea70899c061c..000000000000
--- a/sci-libs/htslib/htslib-1.9.ebuild
+++ /dev/null
@@ -1,45 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="0/2"
-LICENSE="MIT"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="+bzip2 curl +lzma static-libs"
-
-RDEPEND="
- bzip2? ( app-arch/bzip2:= )
- curl? ( net-misc/curl )
- lzma? ( app-arch/xz-utils:= )"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
- default
-
- # upstream injects LDFLAGS into the .pc file,
- # which is a big nono for QA
- sed 's/private_LIBS=$LDFLAGS/private_LIBS=""/g' -i configure || die
-}
-
-src_configure() {
- econf \
- --disable-gcs \
- --disable-plugins \
- --disable-s3 \
- $(use_enable bzip2 bz2) \
- $(use_enable curl libcurl) \
- $(use_enable lzma)
-}
-
-src_install() {
- default
-
- if ! use static-libs; then
- find "${D}" -name '*.a' -delete || die
- fi
-}