gentoo auto-resync : 19:12:2022 - 19:49:08

9 files changed, 1 insertions, 875 deletions

diff --git a/sci-libs/hdf5/Manifest b/sci-libs/hdf5/Manifest
index 21188e4f22af..bcaff401bd57 100644
--- a/sci-libs/hdf5/Manifest
+++ b/sci-libs/hdf5/Manifest
@@ -1,19 +1,11 @@
-AUX hdf5-1.12.1-cmake_installdirs.patch 4313 BLAKE2B 78b894a3535c71dbd673e2061e09e1a57d57c1d65418ac87e51669e7cf8a77f023aac076686e978b89903fb0aa74f0511f779ceb149ab783e5624ec24bf5c6a6 SHA512 4a8fce1e3a5ae9d8cdca4fa377011fb7333de0b233e79c6eeed9a24154925eb8dededfe8cff4e28a7cedeb2fbfe194df1a5f18629d56de47b4ba3097824e6b7d
-AUX hdf5-1.12.2-cmake_installdirs.patch 7289 BLAKE2B 7a8846200194c93f014e1862165d153e3dc21df87f08458c827356051cb4e1ffc90df4f176063356347eea881153f48c791cf51fa209ec3b5ca883edc13c06b1 SHA512 3c0933d64207ddead06cd575d40d919402a94a5317f14da1a5ee3b06c88ac65b108754d698715618b87104d8d471eaa6131310b0077202eac0ed221b3da18c5b
 AUX hdf5-1.12.2-no-messing-ldpath.patch 1086 BLAKE2B 77aba02cd8f3663883fa5cf91b3f77067163f58ec4270d22e2c4e1a5b9b1cc138a2e9dd1c7a44331165c69d6c7a0427fe2708bae63958b416a9f26c799de7443 SHA512 8b8aa080cb6feded376900cf9f4b1f1bbe98550b37e9ae8ad660419f732e686aae2ff6eac37e7810ee438a0e9c1b7a37d24f5db8590cce0c91f482ec7b873527
 AUX hdf5-1.12.2-no-strip-symbols.patch 434 BLAKE2B c8d96cb95d3444c18349d72b7fd59f76b4af3d0c5422a7c31161b8f98afacb322b042b8f5751b581565b351148fd0f4003379349b6ca964f5957cd9e19ebdebc SHA512 6b593a8bbbd4a4e9b97e8b3324ad90024b2c09c669d2f6e21a0d23adb66bbbec34afc5961bf97bc6f913492e33610a4b5aeca6a7a4ef9f7605ce5b69fbba6527
 AUX hdf5-1.8.13-no-messing-ldpath.patch 1141 BLAKE2B d7d186e4c00acb9fd3d44beb1d8c3c4da0c373f88b3fdf21e1f89b169b747d49572239385228687cfc10380bdceb9ca6d1ac0d5f5154cb7a328f8a2d509fb28d SHA512 e43021ceb83909ab06ba378363c192aa0f1b34cc7c2b121f5000e215516dbdea1b825a53ac4023073bf4870a5c3452c22f5535391d95af45ad63a309e1ffa5a4
 AUX hdf5-1.8.9-mpicxx.patch 494 BLAKE2B 148d87af064e2ba28c918c8db39ece0782a179803e4c38c5cd5eaba81a673bb8aa3699a48e80a7ae2d4579ac0261cc21d5509e46661ada9a69f444a58eb45ecd SHA512 8b4c39e40591860652547ea8ff205230da7d67488233e911cbcb3416eab561f2529c65bc5e7c9c812bf4298812346f47f9209e5f69f7e8f66ad587306a5b477b
 AUX hdf5-1.8.9-static_libgfortran.patch 429 BLAKE2B 9e1c544a453c09b3498a7d9d3e8090c928571776934c4dd6b426cbdb2783ed8f47185d6ee0c73ede6b4f14e27459ef5e1412112e9d897daa2dc57f1ad5fb0b24 SHA512 af97c54469a90bf3b0e8ec1218d4ca95822ac0cbc7120114979fc467fe3114743c74f4d4e16f0c10b1cd82d40880ef482f6fd34e1effc7c621b981ad466204f9
 DIST hdf5-1.10.5.tar.bz2 8706317 BLAKE2B ac326be8fe4ccc4b0153f15bc7d65aa8f1adc2ae279d3980f57ed46722b754d3f36ecf1d6273c75e80ed1afd4bbf10c6b1c5d9408e1f83a4b2e397e7902a7d3c SHA512 769e43b8672e26fe24ed68da0228c010d3d9bc950ca09f0bc60707911a2f26f2f8415c8abc8ec06e07667148d8cdb3b0c7b3e7860d9b19739629c5dfd5ce73d4
-DIST hdf5-1.12.1.tar.bz2 9724309 BLAKE2B cc75ba497188b33972218d02a7601acad1a0443bdb934ecd1641ef5996076fe120e3b72dba3a99d99f919fb4e478d1e531414448de9a7b97a0afde58a4c7c23f SHA512 158a067ee284ccb9e2c4db12e9d37cf187d90d9ef1bed7a6303e2c3a2fd216d7b13a46c5f46018b097511281c4246156b6f917633ca88872f10f0ad04be285fd
 DIST hdf5-1.12.2.tar.bz2 10494264 BLAKE2B 99ca5b57f6f54fa044c909f0773de62b218c1f0ec3c011f88f3c227536dd719e77ddbe42d562b1214e8843e41d8fc56db499d7f122876fdd36ef31b235229cb7 SHA512 cbb4663570de76b11adb6bf62cfdb754371d31eeab04691479a5764a45207a9c1309665ab80f51c63a4b9b87354f9cbe6835cef506a9fd554d142c6d2bec21e5
 EBUILD hdf5-1.10.5-r1.ebuild 2940 BLAKE2B 45e4cf6004cb70667829844ddf37f2c4f96d6b5c92a8eb9b3c757ea47e6d9f98e28f906c7d2c6a33efd95328bc0b6358d640da36c82fc5408bbb968c38b95115 SHA512 04ac047f56128f41f4cdc8b07caa0d656f31d34200961a1ee525583263dc338abff7860158f9549ddf31bf0563ed963fbd5dff4ee212d85443aff599e5d2c25a
-EBUILD hdf5-1.10.5.ebuild 2770 BLAKE2B 33a671a87978ba04e1b43cbc048093f12d6303841353124a0ba405fec1d32fdc2cb15ed627b968fc5c3feeba151e78525adf77be3f420993d02f793cf094b96d SHA512 3bb860418e226967b1a2b50ecbbeb6ca793790a7915d6cb6f9ea201816cbc555b455596e200fc2504084597ccbe4d1ae1f91cbc64d68c7a39d2eeae998194304
-EBUILD hdf5-1.12.1-r1.ebuild 3468 BLAKE2B da5ba395f8971076a6a3186332f94446dadc7be2817fbb488c612bf4f1b283fc927ea33b7eff23dfbe5b43c1c27a85d72d72ddd4fb617e37a79416fede96bd1b SHA512 96c6c2f95e13a7841f6a9fa63e838ad218819bd0c854c8994a382c15e2f3fff1ae11f099cd613c4b41efa726b1616ead0cf9c4a0d6aedf6d0c7b2d8ca0d8f7ea
-EBUILD hdf5-1.12.1.ebuild 3144 BLAKE2B 2bd023c0ade920fc795f4434260318095a34b200ddb6a458a6ee7d647fac79d4e31029f93a0d2aafede8682e515a9f9c9db46b5a976f07cd83d5086f77538079 SHA512 10ce8493fd3fa421d8c71267e7c57adaac490244742ed93166ce634f5b956b392efb3b86814c17ad8bfba3347c4e3be54b5688b8eec3af848f1d13c341bb8bcc
-EBUILD hdf5-1.12.2-r1.ebuild 3389 BLAKE2B 536c7a51533849c8b19f2a086b35352a9a845d89417ba10464ef53b0ee444fcab2fec0e369d5bdf9a1aa4746c0f004726200db1b60b67b3876eb425504d6d173 SHA512 1ccc6ce4ca8712bdd39d79e5acd82886a592d0578f14162ed374675e9bfcd2e8fe838354acea030298b340c9fac22f250913e205a9e943a4919237c0603766cc
-EBUILD hdf5-1.12.2-r2.ebuild 3456 BLAKE2B d59c684d4494e7f7f484dc87297ef1465998a8f9d75c2cf268e1d689353fd5e092c27dd0a61907ffe11cb35c424e2f9e972a7e3770f0938808bd704cdeca7961 SHA512 4e0b609458298ab12214aa68bb298063d35f64c12c4eff0cc656546b930dce5cc5891e9cdd6d030f7d616aa4ca13386dbbb020970cbea6d939bbe2356fb310ed
 EBUILD hdf5-1.12.2-r4.ebuild 3209 BLAKE2B eb7b30bee62cbad778b07f089026395d70046e3845b636bdb526e0960e4ae3789f2e5d1c9eac6fc213b755809c42946cf332446582d032d04900cfd80b57b06a SHA512 e6c2c24f9558c381b8ae5da8f0967635c64b02ad5f8288d5a08841c7637f8de7b72229f89d8be2cff5cd0c8c4482b404db3a7d41aeeaa927157c257f91fb62a3
 EBUILD hdf5-1.12.2-r5.ebuild 3296 BLAKE2B a0930b328b9d52218d95d4fe613d37b82f34805a97a51f366fe9785028c69aab19c7225e65929be4e14b882266b5318cff327bf98cb7ebea11de64248d9c982e SHA512 3e89fd024d44dd9f12dea298411730083c54b880b261d831afb8a29b19b83cbf28780ad3dd7cbbf2ccf4fff11630547131a37291052849adee0c678393005918
-MISC metadata.xml 985 BLAKE2B 989b487ac17b7cfc1920144207dbe101cb46d059e2f219d3da15094a7cd2da9979d0d11ef177f2c5542f010aefb4c1be10768d5c98a3e0b6235a4228b452f283 SHA512 e95daa26ad42f923ab113db8e62d2a37e4d8296e1cdc8e856a2f4ab5ffbcd0797c7be7365d3f3d55ab1e6cb45f17e6264bcf0df8d2ae013e972e28f679dfce61
+MISC metadata.xml 826 BLAKE2B fd131bb207e4ab863ef7c05ab95e5c0254fa08230139a2508ab5f0c363809b0735532498ad26cc39621495a063de86ab5bd97447514ff561a63302e8b1d7d26d SHA512 290883ed9bf3de60bf04e2474c4db50e095b1b87974867e58601a5c5c2f98d6b839ed22d9ce2798bc44f484f1a38ee4b6df99aaea7d134629bd441d34b5a29b5
diff --git a/sci-libs/hdf5/files/hdf5-1.12.1-cmake_installdirs.patch b/sci-libs/hdf5/files/hdf5-1.12.1-cmake_installdirs.patch
deleted file mode 100644
index 8c4dc34cb80c..000000000000
--- a/sci-libs/hdf5/files/hdf5-1.12.1-cmake_installdirs.patch
+++ /dev/null
@@ -1,103 +0,0 @@
---- a/c++/src/CMakeLists.txt
-+++ b/c++/src/CMakeLists.txt
-@@ -180,8 +180,8 @@
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_CPP_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -46,6 +46,13 @@
-   endif()
- endif ()
- 
-+include (GNUInstallDirs)
-+set (HDF5_INSTALL_BIN_DIR "${CMAKE_INSTALL_FULL_BINDIR}")
-+set (HDF5_INSTALL_DATA_DIR "${CMAKE_INSTALL_FULL_DATADIR}")
-+set (HDF5_INSTALL_DOC_DIR "${CMAKE_INSTALL_FULL_DOCDIR}")
-+set (HDF5_INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_FULL_INCLUDEDIR}")
-+set (HDF5_INSTALL_LIB_DIR "${CMAKE_INSTALL_FULL_LIBDIR}")
-+
- #-----------------------------------------------------------------------------
- # Instructions for use : Sub-Project Build
- #
---- a/fortran/src/CMakeLists.txt
-+++ b/fortran/src/CMakeLists.txt
-@@ -537,8 +537,8 @@
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_F90_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/hl/c++/src/CMakeLists.txt
-+++ b/hl/c++/src/CMakeLists.txt
-@@ -91,8 +91,8 @@
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_HL_CPP_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/hl/fortran/src/CMakeLists.txt
-+++ b/hl/fortran/src/CMakeLists.txt
-@@ -324,8 +324,8 @@
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_HL_F90_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/hl/src/CMakeLists.txt
-+++ b/hl/src/CMakeLists.txt
-@@ -123,8 +123,8 @@
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_HL_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/src/CMakeLists.txt
-+++ b/src/CMakeLists.txt
-@@ -1311,8 +1311,8 @@
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
-@@ -1419,7 +1419,7 @@
- #  )
-   install (
-       DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs/html
--      DESTINATION ${HDF5_INSTALL_DATA_DIR}
-+      DESTINATION ${HDF5_INSTALL_DOC_DIR}
-       COMPONENT Documents
-   )
- 
diff --git a/sci-libs/hdf5/files/hdf5-1.12.2-cmake_installdirs.patch b/sci-libs/hdf5/files/hdf5-1.12.2-cmake_installdirs.patch
deleted file mode 100644
index 6ea7520c0f13..000000000000
--- a/sci-libs/hdf5/files/hdf5-1.12.2-cmake_installdirs.patch
+++ /dev/null
@@ -1,164 +0,0 @@
-https://github.com/HDFGroup/hdf5/pull/1716
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -46,6 +46,13 @@ if (CMAKE_VERSION VERSION_LESS "3.14.0")
-   endif()
- endif ()
- 
-+include (GNUInstallDirs)
-+set (HDF5_INSTALL_BIN_DIR "${CMAKE_INSTALL_FULL_BINDIR}")
-+set (HDF5_INSTALL_DATA_DIR "${CMAKE_INSTALL_FULL_DATADIR}")
-+set (HDF5_INSTALL_DOC_DIR "${CMAKE_INSTALL_FULL_DOCDIR}")
-+set (HDF5_INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_FULL_INCLUDEDIR}")
-+set (HDF5_INSTALL_LIB_DIR "${CMAKE_INSTALL_FULL_LIBDIR}")
-+
- #-----------------------------------------------------------------------------
- # Instructions for use : Sub-Project Build
- #
---- a/c++/src/CMakeLists.txt
-+++ b/c++/src/CMakeLists.txt
-@@ -173,8 +173,8 @@ endif ()
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_CPP_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/doxygen/CMakeLists.txt
-+++ b/doxygen/CMakeLists.txt
-@@ -36,7 +36,7 @@ if (DOXYGEN_FOUND)
- 
-   install (
-       DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs/html
--      DESTINATION ${HDF5_INSTALL_DATA_DIR}
-+      DESTINATION ${HDF5_INSTALL_DOC_DIR}
-       COMPONENT Documents
-   )
- 
---- a/fortran/src/CMakeLists.txt
-+++ b/fortran/src/CMakeLists.txt
-@@ -537,8 +537,8 @@ endif ()
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_F90_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/hl/c++/src/CMakeLists.txt
-+++ b/hl/c++/src/CMakeLists.txt
-@@ -91,8 +91,8 @@ endif ()
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_HL_CPP_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/hl/fortran/src/CMakeLists.txt
-+++ b/hl/fortran/src/CMakeLists.txt
-@@ -324,8 +324,8 @@ endif ()
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_HL_F90_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/hl/src/CMakeLists.txt
-+++ b/hl/src/CMakeLists.txt
-@@ -123,8 +123,8 @@ endif ()
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_HL_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/src/CMakeLists.txt
-+++ b/src/CMakeLists.txt
-@@ -1288,8 +1288,8 @@ endif ()
- #-----------------------------------------------------------------------------
- set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
- set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
--set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
--set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
-+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
-+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
- set (_PKG_CONFIG_LIBNAME "${HDF5_LIB_CORENAME}")
- set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
- 
---- a/CMakeInstallation.cmake
-+++ b/CMakeInstallation.cmake
-@@ -31,7 +31,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
-   if (HDF5_EXPORTED_TARGETS)
-     install (
-         EXPORT ${HDF5_EXPORTED_TARGETS}
--        DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
-+        DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake
-         FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake
-         NAMESPACE ${HDF_PACKAGE_NAMESPACE}
-         COMPONENT configinstall
-@@ -67,12 +67,12 @@ set (HDF5_VERSION_MINOR  ${HDF5_PACKAGE_VERSION_MINOR})
- # Configure the hdf5-config.cmake file for the build directory
- #-----------------------------------------------------------------------------
- set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR})
--set (SHARE_INSTALL_DIR "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_INSTALL_CMAKE_DIR}" )
-+set (SHARE_INSTALL_DIR "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_INSTALL_LIB_DIR}/cmake" )
- set (CURRENT_BUILD_DIR "${CMAKE_CURRENT_BINARY_DIR}" )
- configure_package_config_file (
-     ${HDF_RESOURCES_DIR}/hdf5-config.cmake.in
-     "${HDF5_BINARY_DIR}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake"
--    INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}"
-+    INSTALL_DESTINATION "${HDF5_INSTALL_LIB_DIR}/cmake"
-     PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR
-     INSTALL_PREFIX "${CMAKE_CURRENT_BINARY_DIR}"
- )
-@@ -81,19 +81,19 @@ configure_package_config_file (
- # Configure the hdf5-config.cmake file for the install directory
- #-----------------------------------------------------------------------------
- set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR})
--set (SHARE_INSTALL_DIR "${CMAKE_INSTALL_PREFIX}/${HDF5_INSTALL_CMAKE_DIR}" )
-+set (SHARE_INSTALL_DIR "${CMAKE_INSTALL_PREFIX}/${HDF5_INSTALL_LIB_DIR}/cmake" )
- set (CURRENT_BUILD_DIR "${CMAKE_INSTALL_PREFIX}" )
- configure_package_config_file (
-     ${HDF_RESOURCES_DIR}/hdf5-config.cmake.in
-     "${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake"
--    INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}"
-+    INSTALL_DESTINATION "${HDF5_INSTALL_LIB_DIR}/cmake"
-     PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR
- )
- 
- if (NOT HDF5_EXTERNALLY_CONFIGURED)
-   install (
-       FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake
--      DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
-+      DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake
-       COMPONENT configinstall
-   )
- endif ()
-@@ -109,7 +109,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
-   )
-   install (
-       FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake
--      DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
-+      DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake
-       COMPONENT configinstall
-   )
- endif ()
diff --git a/sci-libs/hdf5/hdf5-1.10.5.ebuild b/sci-libs/hdf5/hdf5-1.10.5.ebuild
deleted file mode 100644
index 1b6770c23e14..000000000000
--- a/sci-libs/hdf5/hdf5-1.10.5.ebuild
+++ /dev/null
@@ -1,102 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-FORTRAN_NEEDED=fortran
-
-inherit autotools fortran-2 flag-o-matic toolchain-funcs prefix
-
-MY_P=${PN}-${PV/_p/-patch}
-MAJOR_P=${PN}-$(ver_cut 1-2)
-
-DESCRIPTION="General purpose library and file format for storing scientific data"
-HOMEPAGE="https://www.hdfgroup.org/HDF5/"
-SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
-
-LICENSE="NCSA-HDF"
-SLOT="0/${PV%%_p*}"
-KEYWORDS="~alpha amd64 ~arm arm64 ~ia64 ppc ppc64 ~riscv sparc x86 ~amd64-linux ~x86-linux"
-IUSE="cxx debug examples fortran +hl mpi szip threads zlib"
-
-REQUIRED_USE="
-	cxx? ( !mpi ) mpi? ( !cxx )
-	threads? ( !cxx !mpi !fortran !hl )"
-
-RDEPEND="
-	mpi? ( virtual/mpi[romio] )
-	szip? ( virtual/szip )
-	zlib? ( sys-libs/zlib:0= )"
-
-DEPEND="${RDEPEND}
-	sys-devel/libtool:2
-	>=sys-devel/autoconf-2.69"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.8.9-static_libgfortran.patch
-	"${FILESDIR}"/${PN}-1.8.9-mpicxx.patch
-	"${FILESDIR}"/${PN}-1.8.13-no-messing-ldpath.patch
-)
-
-pkg_setup() {
-	tc-export CXX CC AR # workaround for bug 285148
-	use fortran && fortran-2_pkg_setup
-
-	if use mpi; then
-		if has_version 'sci-libs/hdf5[-mpi]'; then
-			ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
-			ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
-		fi
-		export CC=mpicc
-		use fortran && export FC=mpif90
-	elif has_version 'sci-libs/hdf5[mpi]'; then
-		ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
-		ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
-	fi
-}
-
-src_prepare() {
-	# respect gentoo examples directory
-	sed \
-		-e "s:hdf5_examples:doc/${PF}/examples:g" \
-		-i $(find . -name Makefile.am) $(find . -name "run*.sh.in") || die
-	sed \
-		-e '/docdir/d' \
-		-i config/commence.am || die
-	if ! use examples; then
-		sed -e '/^install:/ s/install-examples//' \
-			-i Makefile.am || die #409091
-	fi
-	# enable shared libs by default for h5cc config utility
-	sed -i -e "s/SHLIB:-no/SHLIB:-yes/g" tools/src/misc/h5cc.in || die
-	hprefixify m4/libtool.m4
-
-	default
-	eautomake
-}
-
-src_configure() {
-	use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
-	econf \
-		--disable-static \
-		--enable-deprecated-symbols \
-		--enable-build-mode=$(usex debug debug production) \
-		$(use_enable cxx) \
-		$(use_enable debug codestack) \
-		$(use_enable fortran) \
-		$(use_enable hl) \
-		$(use_enable mpi parallel) \
-		$(use_enable threads threadsafe) \
-		$(use_with szip szlib) \
-		$(use_with threads pthread) \
-		$(use_with zlib)
-}
-
-src_install() {
-	default
-
-	# no static archives
-	find "${D}" -name '*.la' -delete || die
-}
diff --git a/sci-libs/hdf5/hdf5-1.12.1-r1.ebuild b/sci-libs/hdf5/hdf5-1.12.1-r1.ebuild
deleted file mode 100644
index 32a8891c8155..000000000000
--- a/sci-libs/hdf5/hdf5-1.12.1-r1.ebuild
+++ /dev/null
@@ -1,128 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-FORTRAN_NEEDED="fortran"
-
-inherit cmake flag-o-matic fortran-2 toolchain-funcs
-
-MY_P="${PN}-${PV/_p/-patch}"
-MAJOR_P="${PN}-$(ver_cut 1-2)"
-
-DESCRIPTION="General purpose library and file format for storing scientific data"
-HOMEPAGE="https://www.hdfgroup.org/HDF5/"
-SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
-
-LICENSE="NCSA-HDF"
-SLOT="0/${PV%%_p*}"
-KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux"
-IUSE="cxx debug doc examples fortran +hl mpi ros3 szip test threads unsupported zlib"
-
-REQUIRED_USE="
-	!unsupported? (
-		mpi? ( !cxx !threads )
-		threads? ( !cxx !fortran !hl )
-	)"
-
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	mpi? ( virtual/mpi[romio] )
-	ros3? (
-		net-misc/curl
-		dev-libs/openssl:=
-	)
-	szip? ( virtual/szip )
-	zlib? ( sys-libs/zlib:0= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="doc? (
-	app-doc/doxygen
-	virtual/latex-base
-)"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.12.1-cmake_installdirs.patch
-)
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	use fortran && fortran-2_pkg_setup
-
-	if use mpi; then
-		if has_version 'sci-libs/hdf5[-mpi]'; then
-			ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
-			ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
-		fi
-		export CC="mpicc"
-		use fortran && export FC="mpif90"
-		append-libs -lmpi
-	elif has_version 'sci-libs/hdf5[mpi]'; then
-		ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
-		ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
-	fi
-}
-
-src_configure() {
-	use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
-	local mycmakeargs=(
-		# Workaround needed to allow build with USE=fortran when an older
-		# version is installed. See bug #808633 and
-		# https://github.com/HDFGroup/hdf5/issues/1027 upstream.
-		-DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON
-		-DBUILD_STATIC_LIBS=OFF
-		-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-		-DHDF5_BUILD_EXAMPLES=OFF
-		-DALLOW_UNSUPPORTED=$(usex unsupported)
-		-DBUILD_TESTING=$(usex test)
-		-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-		-DHDF5_BUILD_DOC=$(usex doc)
-		-DHDF5_BUILD_FORTRAN=$(usex fortran)
-		-DHDF5_BUILD_HL_LIB=$(usex hl)
-		-DHDF5_ENABLE_CODESTACK=$(usex debug)
-		-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-		-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-		-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-		-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-		-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
-		-DHDF5_ENABLE_ROS3_VFD:BOOL=$(usex ros3)
-	)
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# TODO: generate functioning example runners from their respective
-	# .in files - as of version 1.12.1 upstream only has it implemented
-	# for autoconf.
-	if use examples; then
-		# These are all useless outside the source tree
-		rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-		rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-
-		dodoc -r examples
-		if use cxx; then
-			docinto c++
-			dodoc -r c++/examples
-		fi
-		if use fortran; then
-			docinto fortran
-			dodoc -r fortran/examples
-		fi
-		if use hl; then
-			docinto hl
-			dodoc -r hl/examples
-			if use cxx; then
-				docinto hl/c++
-				dodoc -r hl/c++/examples
-			fi
-			if use fortran; then
-				docinto hl/fortran
-				dodoc -r hl/fortran/examples
-			fi
-		fi
-	fi
-}
diff --git a/sci-libs/hdf5/hdf5-1.12.1.ebuild b/sci-libs/hdf5/hdf5-1.12.1.ebuild
deleted file mode 100644
index 8248d6614f5a..000000000000
--- a/sci-libs/hdf5/hdf5-1.12.1.ebuild
+++ /dev/null
@@ -1,119 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-FORTRAN_NEEDED="fortran"
-
-inherit cmake flag-o-matic fortran-2 toolchain-funcs
-
-MY_P="${PN}-${PV/_p/-patch}"
-MAJOR_P="${PN}-$(ver_cut 1-2)"
-
-DESCRIPTION="General purpose library and file format for storing scientific data"
-HOMEPAGE="https://www.hdfgroup.org/HDF5/"
-SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
-
-LICENSE="NCSA-HDF"
-SLOT="0/${PV%%_p*}"
-KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux"
-IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib"
-
-REQUIRED_USE="
-	!unsupported? (
-		mpi? ( !cxx !threads )
-		threads? ( !cxx !fortran !hl )
-	)"
-
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	mpi? ( virtual/mpi[romio] )
-	szip? ( virtual/szip )
-	zlib? ( sys-libs/zlib:0= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="doc? (
-	app-doc/doxygen
-	virtual/latex-base
-)"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.12.1-cmake_installdirs.patch
-)
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	use fortran && fortran-2_pkg_setup
-
-	if use mpi; then
-		if has_version 'sci-libs/hdf5[-mpi]'; then
-			ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
-			ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
-		fi
-		export CC="mpicc"
-		use fortran && export FC="mpif90"
-		append-libs -lmpi
-	elif has_version 'sci-libs/hdf5[mpi]'; then
-		ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
-		ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
-	fi
-}
-
-src_configure() {
-	use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
-	local mycmakeargs=(
-		-DBUILD_STATIC_LIBS=OFF
-		-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-		-DHDF5_BUILD_EXAMPLES=OFF
-		-DALLOW_UNSUPPORTED=$(usex unsupported)
-		-DBUILD_TESTING=$(usex test)
-		-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-		-DHDF5_BUILD_DOC=$(usex doc)
-		-DHDF5_BUILD_FORTRAN=$(usex fortran)
-		-DHDF5_BUILD_HL_LIB=$(usex hl)
-		-DHDF5_ENABLE_CODESTACK=$(usex debug)
-		-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-		-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-		-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-		-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-		-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
-	)
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# TODO: generate functioning example runners from their respective
-	# .in files - as of version 1.12.1 upstream only has it implemented
-	# for autoconf.
-	if use examples; then
-		# These are all useless outside the source tree
-		rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-		rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-
-		dodoc -r examples
-		if use cxx; then
-			docinto c++
-			dodoc -r c++/examples
-		fi
-		if use fortran; then
-			docinto fortran
-			dodoc -r fortran/examples
-		fi
-		if use hl; then
-			docinto hl
-			dodoc -r hl/examples
-			if use cxx; then
-				docinto hl/c++
-				dodoc -r hl/c++/examples
-			fi
-			if use fortran; then
-				docinto hl/fortran
-				dodoc -r hl/fortran/examples
-			fi
-		fi
-	fi
-}
diff --git a/sci-libs/hdf5/hdf5-1.12.2-r1.ebuild b/sci-libs/hdf5/hdf5-1.12.2-r1.ebuild
deleted file mode 100644
index 325f24396b29..000000000000
--- a/sci-libs/hdf5/hdf5-1.12.2-r1.ebuild
+++ /dev/null
@@ -1,124 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-FORTRAN_NEEDED="fortran"
-
-inherit cmake flag-o-matic fortran-2 toolchain-funcs
-
-MY_P="${PN}-${PV/_p/-patch}"
-MAJOR_P="${PN}-$(ver_cut 1-2)"
-
-DESCRIPTION="General purpose library and file format for storing scientific data"
-HOMEPAGE="https://www.hdfgroup.org/HDF5/"
-SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
-
-LICENSE="NCSA-HDF"
-SLOT="0/${PV%%_p*}"
-KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux"
-IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib"
-
-REQUIRED_USE="
-	!unsupported? (
-		mpi? ( !cxx !threads )
-		threads? ( !cxx !fortran !hl )
-	)"
-
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	mpi? ( virtual/mpi[romio] )
-	szip? ( virtual/szip )
-	zlib? ( sys-libs/zlib:0= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="doc? (
-	app-doc/doxygen
-	virtual/latex-base
-)"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.12.2-cmake_installdirs.patch
-)
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	use fortran && fortran-2_pkg_setup
-
-	if use mpi; then
-		if has_version 'sci-libs/hdf5[-mpi]'; then
-			ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
-			ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
-		fi
-		export CC="mpicc"
-		use fortran && export FC="mpif90"
-		append-libs -lmpi
-	elif has_version 'sci-libs/hdf5[mpi]'; then
-		ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
-		ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
-	fi
-}
-
-src_configure() {
-	use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
-	local mycmakeargs=(
-		# Workaround needed to allow build with USE=fortran when an older
-		# version is installed. See bug #808633 and
-		# https://github.com/HDFGroup/hdf5/issues/1027 upstream.
-		-DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON
-		-DBUILD_STATIC_LIBS=OFF
-		-DONLY_SHARED_LIBS=ON
-		-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-		-DHDF5_BUILD_EXAMPLES=OFF
-		-DALLOW_UNSUPPORTED=$(usex unsupported)
-		-DBUILD_TESTING=$(usex test)
-		-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-		-DHDF5_BUILD_DOC=$(usex doc)
-		-DHDF5_BUILD_FORTRAN=$(usex fortran)
-		-DHDF5_BUILD_HL_LIB=$(usex hl)
-		-DHDF5_ENABLE_CODESTACK=$(usex debug)
-		-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-		-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-		-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-		-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-		-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
-	)
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# TODO: generate functioning example runners from their respective
-	# .in files - as of version 1.12.1 upstream only has it implemented
-	# for autoconf.
-	if use examples; then
-		# These are all useless outside the source tree
-		rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-		rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-
-		dodoc -r examples
-		if use cxx; then
-			docinto c++
-			dodoc -r c++/examples
-		fi
-		if use fortran; then
-			docinto fortran
-			dodoc -r fortran/examples
-		fi
-		if use hl; then
-			docinto hl
-			dodoc -r hl/examples
-			if use cxx; then
-				docinto hl/c++
-				dodoc -r hl/c++/examples
-			fi
-			if use fortran; then
-				docinto hl/fortran
-				dodoc -r hl/fortran/examples
-			fi
-		fi
-	fi
-}
diff --git a/sci-libs/hdf5/hdf5-1.12.2-r2.ebuild b/sci-libs/hdf5/hdf5-1.12.2-r2.ebuild
deleted file mode 100644
index 12d13c181a04..000000000000
--- a/sci-libs/hdf5/hdf5-1.12.2-r2.ebuild
+++ /dev/null
@@ -1,125 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-FORTRAN_NEEDED="fortran"
-
-inherit cmake flag-o-matic fortran-2 toolchain-funcs
-
-MY_P="${PN}-${PV/_p/-patch}"
-MAJOR_P="${PN}-$(ver_cut 1-2)"
-
-DESCRIPTION="General purpose library and file format for storing scientific data"
-HOMEPAGE="https://www.hdfgroup.org/HDF5/"
-SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
-
-LICENSE="NCSA-HDF"
-SLOT="0/${PV%%_p*}"
-KEYWORDS="~alpha amd64 arm arm64 ~hppa ~ia64 ppc ppc64 ~riscv ~s390 sparc x86 ~amd64-linux ~x86-linux"
-IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib"
-
-REQUIRED_USE="
-	!unsupported? (
-		mpi? ( !cxx !threads )
-		threads? ( !cxx !fortran !hl )
-	)"
-
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	mpi? ( virtual/mpi[romio] )
-	szip? ( virtual/szip )
-	zlib? ( sys-libs/zlib:0= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="doc? (
-	app-doc/doxygen
-	virtual/latex-base
-)"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.12.2-cmake_installdirs.patch
-)
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	use fortran && fortran-2_pkg_setup
-
-	if use mpi; then
-		if has_version 'sci-libs/hdf5[-mpi]'; then
-			ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
-			ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
-		fi
-		export CC="mpicc"
-		use fortran && export FC="mpif90"
-		append-libs -lmpi
-	elif has_version 'sci-libs/hdf5[mpi]'; then
-		ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
-		ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
-	fi
-}
-
-src_configure() {
-	use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
-	local mycmakeargs=(
-		# Workaround needed to allow build with USE=fortran when an older
-		# version is installed. See bug #808633 and
-		# https://github.com/HDFGroup/hdf5/issues/1027 upstream.
-		-DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON
-		-DBUILD_STATIC_LIBS=OFF
-		-DONLY_SHARED_LIBS=ON
-		-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-		-DHDF5_BUILD_EXAMPLES=OFF
-		-DH5_DEFAULT_PLUGINDIR="${EPREFIX}/usr/$(get_libdir)/hdf5/plugin"
-		-DALLOW_UNSUPPORTED=$(usex unsupported)
-		-DBUILD_TESTING=$(usex test)
-		-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-		-DHDF5_BUILD_DOC=$(usex doc)
-		-DHDF5_BUILD_FORTRAN=$(usex fortran)
-		-DHDF5_BUILD_HL_LIB=$(usex hl)
-		-DHDF5_ENABLE_CODESTACK=$(usex debug)
-		-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-		-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-		-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-		-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-		-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
-	)
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# TODO: generate functioning example runners from their respective
-	# .in files - as of version 1.12.1 upstream only has it implemented
-	# for autoconf.
-	if use examples; then
-		# These are all useless outside the source tree
-		rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-		rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
-
-		dodoc -r examples
-		if use cxx; then
-			docinto c++
-			dodoc -r c++/examples
-		fi
-		if use fortran; then
-			docinto fortran
-			dodoc -r fortran/examples
-		fi
-		if use hl; then
-			docinto hl
-			dodoc -r hl/examples
-			if use cxx; then
-				docinto hl/c++
-				dodoc -r hl/c++/examples
-			fi
-			if use fortran; then
-				docinto hl/fortran
-				dodoc -r hl/fortran/examples
-			fi
-		fi
-	fi
-}
diff --git a/sci-libs/hdf5/metadata.xml b/sci-libs/hdf5/metadata.xml
index 8f7b63aa4610..e36b723f3510 100644
--- a/sci-libs/hdf5/metadata.xml
+++ b/sci-libs/hdf5/metadata.xml
@@ -13,7 +13,6 @@
 	</longdescription>
 	<use>
 		<flag name="hl">Enable high level API (https://support.hdfgroup.org/HDF5/doc/HL/index.html)</flag>
-		<flag name="ros3">Enable support for read-only S3 access (https://portal.hdfgroup.org/display/HDF5/Configuration+and+Setup+for+HDF5+Read+Only+S3+VFD)</flag>
 		<flag name="unsupported">Enable unsupported combinations of configuration options</flag>
 	</use>
 	<upstream>