gentoo resync : 22.10.2018

5 files changed, 27 insertions, 178 deletions

diff --git a/sci-libs/exodusii/Manifest b/sci-libs/exodusii/Manifest
index c2e4d887173f..1ff7d7998db4 100644
--- a/sci-libs/exodusii/Manifest
+++ b/sci-libs/exodusii/Manifest
@@ -1,7 +1,4 @@
-AUX exodusii-5.26-multilib.patch 3148 BLAKE2B 09e88bebddc10fb1940ec14c43a75352059f0fe07082b75adfe4a494371f67da1649b85eecee6e27b3fbc36ee77c9864b27f8e3d458b3f8adad28dfb07313ebf SHA512 f37a2463b7c8a243a6fdd690e8a2b18601188ba144862842833e81120226c6969f4ed815eef89a3b4f47b2fa55dbe3d0799441783f4acc478eaeed4c0217644b
-AUX exodusii-6.09-multilib.patch 3125 BLAKE2B 9b6151c227d235689f99155e53c20053adb0cbcdcda265f2e66c4fb7c4ddf2da36d3657d9cc43ec723d6f5ef8e099acfb94a4b9a40a1f3bbbfddf3bc917fe71b SHA512 7575ea71ed4d21135c6ddeb6932298951ac4d1cdef3b0129104f12c475308bd9224fef4f85233e9ffb644dabba0dec2bdc1819f7d6c0f6b4adb73bc98636f41c
-DIST exodus-6.02.tar.gz 4735364 BLAKE2B 3744bf218e0cc3e8e012ddb61833fd6129f8c394159cc1de9ff4a07af5eb220b468da8148aa3cf70a32aa6d776a10db57aee8576c1592707a1db6c353a639b06 SHA512 d086464f0af2edd06d6e6a49be28d3bdfe00c0e9a9a09abad7822a49c7a7fbb75b61324ea54d2163c73b45ee90222c22754c804ee6868cdb0f9e4b780d6d5ad0
+AUX exodusii-6.09-multilib.patch 2891 BLAKE2B 0bca9f2e768b409f1683c3d1925add553f86a9fca393551b98fefac1d4cc9913d50be4660bd4c62474a95f2aae129480533d2a51aaa2083cb5461b91c8655f7f SHA512 189047d12455c539308b8eeb81334d980f847d68b96df7cef442f8d552404e5c70f42a3e3649d62cc7db395ae2ca2f6988ee0638eebf52b3cab9c3bf964d5fc2
 DIST exodus-6.09.tar.gz 4757028 BLAKE2B 3ea6ccf3faa04e14a6268429bab0968e0b09a1de7907ae50e293abede1f9362df7ca97f8f351bcb807c49965eb845b161ea5ca9d1786e66bb74875fec5ae20f6 SHA512 a48c02952b0edfae416e9b3f77471558dd2d60177471eca3de32890d11afabe3cfb64396de83e728327d43bbea83969ebcdd8ea516a3b9a6ed7353d4cc940516
-EBUILD exodusii-6.02.ebuild 1156 BLAKE2B 7c10f3a8506bdde2165f00eb5a339e623b4072b95e8a8db6f65d4655d7eaef46772a187128fc65ee2098ff074e62bdc000d10241b0e576183b0f4949836601b8 SHA512 916371ad1b1d62e046b4f52f9b88b32292fc8cedc456aa3d4a469757bb7eb1ddf7ff1d610ddd466c4745b3cc6b495fb436fe634aab6a025cfffbcadd7f708cd8
-EBUILD exodusii-6.09.ebuild 1200 BLAKE2B 004033d07cdd7b20252d7666d1672102f05104eed94cb66d60e2811acc6373ae849774b7f3fe16a2d0f3fd47e15fa7cd4c72a043c49c1685b4aee8699f9f4c0b SHA512 891bf37f0810fbde2cfac9e8141971c3feccc43bd42966ed63af01dd09fbd350c24a2abf48550743be291f91f9aa701e0ff1be9ae0d95eb4c09351dc4d1b8788
+EBUILD exodusii-6.09.ebuild 1196 BLAKE2B c2ec5c8ed0c7665420cfa52edfac0e0deb6c504345775e31324d552e2dd103fed776ad31144f360b0b17ffbb33238130e73d1eb92025992368a4bcae7e611a0d SHA512 93d3dec6907f696c84ff8962dd9d942ddbabb0195e220332537500418d6d916c0281de58774eb4311cb78c5d513a63860a1b40af3a153024f5f581da99fa1804
 MISC metadata.xml 603 BLAKE2B 99e4fc167e1cf5e96571a2024a8b217083a200fa3850d09c2d520939a87608ecc70708dd302f1c292338aa4c07d0a586c77da80392f85c16e2fb122f98c86cee SHA512 9d703efe9fbf4d49438d83bcdca60db2cd9a40f0b853fcf8cd796d9f96d304c84825c9e2cb26ba98f1893e3e85ddd1af8a5e15c4c4e179d6de25b1df98be3a55
diff --git a/sci-libs/exodusii/exodusii-6.02.ebuild b/sci-libs/exodusii/exodusii-6.02.ebuild
deleted file mode 100644
index dcaf91498fb5..000000000000
--- a/sci-libs/exodusii/exodusii-6.02.ebuild
+++ /dev/null
@@ -1,54 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-FORTRAN_NEEDED="test"
-
-inherit cmake-utils fortran-2 multilib
-
-MY_PN="${PN%ii}"
-MY_P="${MY_PN}-${PV}"
-
-DESCRIPTION="Model developed to store and retrieve transient data for finite element analyses"
-HOMEPAGE="https://sourceforge.net/projects/exodusii/"
-SRC_URI="mirror://sourceforge/project/${PN}/${MY_P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
-IUSE="static-libs test"
-
-RDEPEND="sci-libs/netcdf[hdf5]"
-DEPEND="${RDEPEND}
-	test? ( app-shells/tcsh )
-"
-
-S="${WORKDIR}"/${MY_P}/${MY_PN}
-
-PATCHES=( "${FILESDIR}"/${PN}-5.26-multilib.patch )
-
-src_prepare() {
-	use test || \
-		sed \
-		-e 's:Fortran::g' \
-		-i CMakeLists.txt || die
-	cmake-utils_src_prepare
-}
-
-src_configure() {
-	local mycmakeargs=(
-		-DLIB_INSTALL_DIR=$(get_libdir)
-		-DNETCDF_DIR="${EPREFIX}/usr/"
-		$(cmake-utils_use_build !static-libs SHARED)
-		$(cmake-utils_use_build test TESTING)
-	)
-	cmake-utils_src_configure
-}
-
-src_test() {
-	cd "${BUILD_DIR}"/cbind/test || die
-	ctest || die
-	cd "${BUILD_DIR}"/forbind/test || die
-	emake f_check
-}
diff --git a/sci-libs/exodusii/exodusii-6.09.ebuild b/sci-libs/exodusii/exodusii-6.09.ebuild
index a91a3e96e992..1b8221b53486 100644
--- a/sci-libs/exodusii/exodusii-6.09.ebuild
+++ b/sci-libs/exodusii/exodusii-6.09.ebuild
@@ -1,22 +1,21 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
+EAPI=6
 
 FORTRAN_NEEDED="test"
-
-inherit cmake-utils fortran-2 multilib
+inherit cmake-utils fortran-2
 
 MY_PN="${PN%ii}"
 MY_P="${MY_PN}-${PV}"
 
 DESCRIPTION="Model developed to store and retrieve transient data for finite element analyses"
-HOMEPAGE="https://sourceforge.net/projects/exodusii/"
-SRC_URI="mirror://sourceforge/project/${PN}/${MY_P}.tar.gz"
+HOMEPAGE="https://github.com/certik/exodus"
+SRC_URI="https://dev.gentoo.org/~asturm/distfiles/${MY_P}.tar.gz"
 
 LICENSE="BSD"
 SLOT="0"
-KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
 IUSE="static-libs test"
 
 RDEPEND="sci-libs/netcdf[hdf5]"
@@ -29,21 +28,23 @@ S="${WORKDIR}"/${MY_P}/${MY_PN}
 PATCHES=( "${FILESDIR}"/${P}-multilib.patch )
 
 src_prepare() {
-	use test || \
-		sed \
-		-e 's:Fortran::g' \
-		-i CMakeLists.txt || die
 	cmake-utils_src_prepare
+
+	if ! use test; then
+		sed -e 's:Fortran::g' -i CMakeLists.txt || die
+	fi
 }
 
 src_configure() {
+	local libdir="$(get_libdir)"
+
 	local mycmakeargs=(
-		-DLIB_INSTALL_DIR=$(get_libdir)
-		-DNETCDF_DIR="${EPREFIX}/usr/"
+		-DLIB_SUFFIX=${libdir#lib}
 		-DPYTHON_INSTALL="${EPREFIX}/usr/share/${PN}"
-		$(cmake-utils_use_build !static-libs SHARED)
-		$(cmake-utils_use_build test TESTING)
+		-DBUILD_SHARED=$(usex !static-libs)
+		-DBUILD_TESTING=$(usex test)
 	)
+	export NETCDF_DIR="${EPREFIX}/usr/"
 	cmake-utils_src_configure
 }
 
diff --git a/sci-libs/exodusii/files/exodusii-5.26-multilib.patch b/sci-libs/exodusii/files/exodusii-5.26-multilib.patch
deleted file mode 100644
index 1d1c1fca6c2b..000000000000
--- a/sci-libs/exodusii/files/exodusii-5.26-multilib.patch
+++ /dev/null
@@ -1,95 +0,0 @@
- CMakeLists.txt         |  6 +++---
- cbind/CMakeLists.txt   |  6 +++---
- forbind/CMakeLists.txt | 12 ++++++------
- 3 files changed, 12 insertions(+), 12 deletions(-)
-
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index ca372f5..a071d99 100644
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -27,7 +27,7 @@ find_path( NETCDF_INCLUDE_DIR netcdf.h
- find_library( NETCDF_LIBRARY
-    NAMES netcdf
-    PATHS "$ENV{ACCESS}/lib"
--         "$ENV{NETCDF_DIR}/lib"
-+         "$ENV{NETCDF_DIR}/lib${LIB_SUFFIX}"
- 	 "$ENV{NETCDF_DIR}/libsrc/.libs"
- )
- 
-@@ -41,14 +41,14 @@ find_program (NETCDF_NCDUMP ncdump
- find_library( HDF5_LIBRARY hdf5
-   $ENV{ACCESS}/lib/shared
-   $ENV{ACCESS}/lib
--  $ENV{NETCDF_DIR}/lib
-+  $ENV{NETCDF_DIR}/lib${LIB_SUFFIX}
-   $ENV{NETCDF_DIR}/libsrc/.libs
-   /usr/local/hdf5/lib
-   )
- find_library( HDF5HL_LIBRARY hdf5_hl
-   $ENV{ACCESS}/lib/shared
-   $ENV{ACCESS}/lib
--  $ENV{NETCDF_DIR}/lib
-+  $ENV{NETCDF_DIR}/lib${LIB_SUFFIX}
-   $ENV{NETCDF_DIR}/libsrc/.libs
-   /usr/local/hdf5/lib
-   )
-diff --git a/cbind/CMakeLists.txt b/cbind/CMakeLists.txt
-index 083891f..66fd17b 100644
---- a/cbind/CMakeLists.txt
-+++ b/cbind/CMakeLists.txt
-@@ -293,9 +293,9 @@ ENDIF(EXODUS_LIBRARY_PROPERTIES)
- 
- IF(NOT EXODUS_INSTALL_NO_LIBRARIES)
-   INSTALL(TARGETS exoIIv2c
--    RUNTIME DESTINATION lib COMPONENT Runtime
--    LIBRARY DESTINATION lib COMPONENT Runtime
--    ARCHIVE DESTINATION lib COMPONENT Development)
-+    RUNTIME DESTINATION lib${LIB_SUFFIX} COMPONENT Runtime
-+    LIBRARY DESTINATION lib${LIB_SUFFIX} COMPONENT Runtime
-+    ARCHIVE DESTINATION lib${LIB_SUFFIX} COMPONENT Development)
-   INSTALL(FILES ${cbind_HEADERS} DESTINATION include COMPONENT Development)
- ENDIF(NOT EXODUS_INSTALL_NO_LIBRARIES)
- 
-diff --git a/forbind/CMakeLists.txt b/forbind/CMakeLists.txt
-index 5ee026c..66ba1b3 100644
---- a/forbind/CMakeLists.txt
-+++ b/forbind/CMakeLists.txt
-@@ -14,7 +14,7 @@ find_path( NETCDF_INCLUDE_DIR netcdf.h
- find_library( NETCDF_LIBRARY
-    NAMES netcdf
-    PATHS "$ENV{ACCESS}/lib"
--         "$ENV{NETCDF_DIR}/lib"
-+         "$ENV{NETCDF_DIR}/lib${LIB_SUFFIX}"
- 	 "$ENV{NETCDF_DIR}/libsrc/.libs"
- )
- 
-@@ -28,14 +28,14 @@ find_program (NETCDF_NCDUMP ncdump
- find_library( HDF5_LIBRARY hdf5
-   $ENV{ACCESS}/lib/shared
-   $ENV{ACCESS}/lib
--  $ENV{NETCDF_DIR}/lib
-+  $ENV{NETCDF_DIR}/lib${LIB_SUFFIX}
-   $ENV{NETCDF_DIR}/libsrc/.libs
-   /usr/local/hdf5/lib
-   )
- find_library( HDF5HL_LIBRARY hdf5_hl
-   $ENV{ACCESS}/lib/shared
-   $ENV{ACCESS}/lib
--  $ENV{NETCDF_DIR}/lib
-+  $ENV{NETCDF_DIR}/lib${LIB_SUFFIX}
-   $ENV{NETCDF_DIR}/libsrc/.libs
-   /usr/local/hdf5/lib
-   )
-@@ -61,9 +61,9 @@ ENDIF(EXODUS_LIBRARY_PROPERTIES)
- 
- IF(NOT EXODUS_INSTALL_NO_LIBRARIES)
-   INSTALL(TARGETS exoIIv2for
--    RUNTIME DESTINATION lib COMPONENT Runtime
--    LIBRARY DESTINATION lib COMPONENT Runtime
--    ARCHIVE DESTINATION lib COMPONENT Development)
-+    RUNTIME DESTINATION lib${LIB_SUFFIX} COMPONENT Runtime
-+    LIBRARY DESTINATION lib${LIB_SUFFIX} COMPONENT Runtime
-+    ARCHIVE DESTINATION lib${LIB_SUFFIX} COMPONENT Development)
-   INSTALL(FILES ${forbind_HEADERS} DESTINATION include COMPONENT Development)
- ENDIF(NOT EXODUS_INSTALL_NO_LIBRARIES)
- 
diff --git a/sci-libs/exodusii/files/exodusii-6.09-multilib.patch b/sci-libs/exodusii/files/exodusii-6.09-multilib.patch
index 3b1b5e2ace7f..5463fba50019 100644
--- a/sci-libs/exodusii/files/exodusii-6.09-multilib.patch
+++ b/sci-libs/exodusii/files/exodusii-6.09-multilib.patch
@@ -1,6 +1,6 @@
-diff -Naur exodus-6.09.orig/exodus/cbind/CMakeLists.txt exodus-6.09/exodus/cbind/CMakeLists.txt
---- exodus-6.09.orig/exodus/cbind/CMakeLists.txt	2016-05-10 13:20:06.408385120 -0600
-+++ exodus-6.09/exodus/cbind/CMakeLists.txt	2016-05-10 13:22:35.378385120 -0600
+diff -Naur a/cbind/CMakeLists.txt b/cbind/CMakeLists.txt
+--- a/cbind/CMakeLists.txt	2016-05-10 13:20:06.408385120 -0600
++++ b/cbind/CMakeLists.txt	2016-05-10 13:22:35.378385120 -0600
 @@ -293,9 +293,9 @@
  
  IF(NOT EXODUS_INSTALL_NO_LIBRARIES)
@@ -14,9 +14,9 @@ diff -Naur exodus-6.09.orig/exodus/cbind/CMakeLists.txt exodus-6.09/exodus/cbind
    INSTALL(FILES ${cbind_HEADERS} DESTINATION include COMPONENT Development)
  ENDIF(NOT EXODUS_INSTALL_NO_LIBRARIES)
  
-diff -Naur exodus-6.09.orig/exodus/CMakeLists.txt exodus-6.09/exodus/CMakeLists.txt
---- exodus-6.09.orig/exodus/CMakeLists.txt	2016-05-10 13:20:06.418385120 -0600
-+++ exodus-6.09/exodus/CMakeLists.txt	2016-05-10 13:21:25.928385120 -0600
+diff -Naur a/CMakeLists.txt b/CMakeLists.txt
+--- a/CMakeLists.txt	2016-05-10 13:20:06.418385120 -0600
++++ b/CMakeLists.txt	2016-05-10 13:21:25.928385120 -0600
 @@ -27,7 +27,7 @@
  find_library( NETCDF_LIBRARY
     NAMES netcdf
@@ -43,9 +43,9 @@ diff -Naur exodus-6.09.orig/exodus/CMakeLists.txt exodus-6.09/exodus/CMakeLists.
    $ENV{NETCDF_DIR}/libsrc/.libs
    /usr/local/hdf5/lib
    )
-diff -Naur exodus-6.09.orig/exodus/forbind/CMakeLists.txt exodus-6.09/exodus/forbind/CMakeLists.txt
---- exodus-6.09.orig/exodus/forbind/CMakeLists.txt	2016-05-10 13:20:06.418385120 -0600
-+++ exodus-6.09/exodus/forbind/CMakeLists.txt	2016-05-10 13:21:25.928385120 -0600
+diff -Naur a/forbind/CMakeLists.txt b/forbind/CMakeLists.txt
+--- a/forbind/CMakeLists.txt	2016-05-10 13:20:06.418385120 -0600
++++ b/forbind/CMakeLists.txt	2016-05-10 13:21:25.928385120 -0600
 @@ -14,7 +14,7 @@
  find_library( NETCDF_LIBRARY
     NAMES netcdf