reinit the tree, so we can have metadata

2 files changed, 294 insertions, 0 deletions

diff --git a/sci-libs/coinor-cppad/files/coinor-cppad-20140519-boost.patch b/sci-libs/coinor-cppad/files/coinor-cppad-20140519-boost.patch
new file mode 100644
index 000000000000..7a4d3ae83aca
--- /dev/null
+++ b/sci-libs/coinor-cppad/files/coinor-cppad-20140519-boost.patch
@@ -0,0 +1,79 @@
+ configure.ac | 18 ++++++++++--------
+ 1 file changed, 10 insertions(+), 8 deletions(-)
+
+diff --git a/configure.ac b/configure.ac
+index 033621f..87e129a 100644
+--- a/configure.ac
++++ b/configure.ac
+@@ -550,13 +550,14 @@ dnl check for boost thread library
+ AC_LANG_PUSH([C++])
+ LDFLAGS_save=$LDFLAGS
+ CXXFLAGS_save=$CXXFLAGS
++LIBS_save=$LIBS
+ boost_thread_found='no'
+ if test "$BOOST_DIR" != '' ; then
+ 	CXXFLAGS="-I$BOOST_DIR/include $CXXFLAGS"
+ fi
+ if test "$BOOST_DIR" = '' && test "$boost_thread_found" = 'no' ; then
+-	bthread_lib='-lboost_thread-mt'
+-	LDFLAGS="$LDFLAGS_save $bthread_lib"
++	bthread_lib='-lboost_thread-mt -lboost_system'
++	LIBS="$LIBS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+ 		[AC_LANG_PROGRAM(
+ 			[# include <boost/thread.hpp>],
+@@ -568,7 +569,7 @@ if test "$BOOST_DIR" = '' && test "$boost_thread_found" = 'no' ; then
+ fi
+ if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread-mt.so"
+-	LDFLAGS="$LDFLAGS_save $bthread_lib"
++	LIBS="$LIBS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+ 		[AC_LANG_PROGRAM(
+ 			[# include <boost/thread.hpp>],
+@@ -580,7 +581,7 @@ if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ fi
+ if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread-mt.a"
+-	LDFLAGS="$LDFLAGS_save $bthread_lib"
++	LIBS="$LIBS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+ 		[AC_LANG_PROGRAM(
+ 			[# include <boost/thread.hpp>],
+@@ -591,8 +592,8 @@ if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	)
+ fi
+ if test "$BOOST_DIR" = '' && test "$boost_thread_found" = 'no' ; then
+-	bthread_lib='-lboost_thread'
+-	LDFLAGS="$LDFLAGS_save $bthread_lib"
++	bthread_lib='-lboost_thread -lboost_system'
++	LIBS="$LIBS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+ 		[AC_LANG_PROGRAM(
+ 			[# include <boost/thread.hpp>],
+@@ -604,7 +605,7 @@ if test "$BOOST_DIR" = '' && test "$boost_thread_found" = 'no' ; then
+ fi
+ if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread.so"
+-	LDFLAGS="$LDFLAGS_save $bthread_lib"
++	LIBS="$LIBS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+ 		[AC_LANG_PROGRAM(
+ 			[# include <boost/thread.hpp>],
+@@ -616,7 +617,7 @@ if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ fi
+ if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread.a"
+-	LDFLAGS="$LDFLAGS_save $bthread_lib"
++	LIBS="$LIBS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+ 		[AC_LANG_PROGRAM(
+ 			[# include <boost/thread.hpp>],
+@@ -636,6 +637,7 @@ else
+ fi
+ LDFLAGS=$LDFLAGS_save
+ CXXFLAGS=$CXXFLAGS_save
++LIBS=$LIBS_save
+ AC_LANG_POP([C++])
+ #
+ dnl --------------------------------------------------------------------------
diff --git a/sci-libs/coinor-cppad/files/coinor-cppad-20140519-dash.patch b/sci-libs/coinor-cppad/files/coinor-cppad-20140519-dash.patch
new file mode 100644
index 000000000000..fe0b210f1075
--- /dev/null
+++ b/sci-libs/coinor-cppad/files/coinor-cppad-20140519-dash.patch
@@ -0,0 +1,215 @@
+ configure.ac | 56 ++++++++++++++++++++++++++++----------------------------
+ 1 file changed, 28 insertions(+), 28 deletions(-)
+
+diff --git a/configure.ac b/configure.ac
+index 9e917dd..033621f 100644
+--- a/configure.ac
++++ b/configure.ac
+@@ -194,7 +194,7 @@ AC_ARG_WITH(sparse_list,
+ )
+ AC_MSG_RESULT([$sparse_list])
+ if test "$sparse_set" = "yes" ; then
+-	if test "$sparse_list" == "yes" ; then
++	if test "$sparse_list" = "yes" ; then
+ 		AC_MSG_ERROR([cannot --with both sparse_set and sparse_list])
+ 	fi
+ 	AC_SUBST(cppad_internal_sparse_set, sparse_set)
+@@ -374,7 +374,7 @@ AC_SUBST(cppad_max_num_threads, [$max_num_threads])
+ dnl type used for addresses in AD tapes [ default = unsigned int ] -----------
+ AC_MSG_CHECKING([TAPE_ADDR_TYPE])
+ AC_ARG_VAR(TAPE_ADDR_TYPE, [type used for addresses in AD tapes])
+-if test "$TAPE_ADDR_TYPE" == "" ; then
++if test "$TAPE_ADDR_TYPE" = "" ; then
+ 	addr_t="unsigned int"
+ else
+ 	addr_t="$TAPE_ADDR_TYPE"
+@@ -382,22 +382,22 @@ fi
+ AC_SUBST(cppad_tape_addr_type, [$addr_t])
+ AC_MSG_RESULT([$addr_t])
+ ok="no"
+-if test "$addr_t" == "size_t" ; then
++if test "$addr_t" = "size_t" ; then
+ 	ok="yes"
+ fi
+-if test "$addr_t" == "int" ; then
++if test "$addr_t" = "int" ; then
+ 	AC_MSG_WARN(
+ 		[TAPE_ADDR_TYPE=int is for CppAD developers (not users)]
+ 	)
+ 	ok="yes"
+ fi
+-if test "$addr_t" == "unsigned int" ; then
++if test "$addr_t" = "unsigned int" ; then
+ 	ok="yes"
+ fi
+-if test "$addr_t" == "unsigned short int" ; then
++if test "$addr_t" = "unsigned short int" ; then
+ 	ok="yes"
+ fi
+-if test "$ok" == "no" ; then
++if test "$ok" = "no" ; then
+   	AC_MSG_ERROR(
+ 		[$addr_t is not a valid choice for TAPE_ADDR_TYPE]
+ 	)
+@@ -406,7 +406,7 @@ fi
+ dnl type used for tape identifier [ default = unsigned int ] -----------
+ AC_MSG_CHECKING([TAPE_ID_TYPE])
+ AC_ARG_VAR(TAPE_ID_TYPE, [type used for addresses in AD tapes])
+-if test "$TAPE_ID_TYPE" == "" ; then
++if test "$TAPE_ID_TYPE" = "" ; then
+ 	tape_id_t="unsigned int"
+ else
+ 	tape_id_t="$TAPE_ID_TYPE"
+@@ -414,22 +414,22 @@ fi
+ AC_SUBST(cppad_tape_id_type, [$tape_id_t])
+ AC_MSG_RESULT([$tape_id_t])
+ ok="no"
+-if test "$tape_id_t" == "size_t" ; then
++if test "$tape_id_t" = "size_t" ; then
+ 	ok="yes"
+ fi
+-if test "$tape_id_t" == "int" ; then
++if test "$tape_id_t" = "int" ; then
+ 	AC_MSG_WARN(
+ 		[TAPE_ID_TYPE=int is for CppAD developers (not users)]
+ 	)
+ 	ok="yes"
+ fi
+-if test "$tape_id_t" == "unsigned int" ; then
++if test "$tape_id_t" = "unsigned int" ; then
+ 	ok="yes"
+ fi
+-if test "$tape_id_t" == "unsigned short int" ; then
++if test "$tape_id_t" = "unsigned short int" ; then
+ 	ok="yes"
+ fi
+-if test "$ok" == "no" ; then
++if test "$ok" = "no" ; then
+   	AC_MSG_ERROR(
+ 		[$tape_id_t is not a valid choice for TAPE_ID_TYPE]
+ 	)
+@@ -447,7 +447,7 @@ AC_SUBST(cppad_has_rvalue, 0)
+ dnl Determine if size_t has same size as unsigned int 
+ AC_CHECK_SIZEOF([size_t])
+ AC_CHECK_SIZEOF([unsigned int])
+-if test "$ac_cv_size_t" == "$ac_cv_unsigned_int" ; then
++if test "$ac_cv_size_t" = "$ac_cv_unsigned_int" ; then
+ 	AC_SUBST(cppad_size_t_same_unsigned_int, 1)
+ else
+ 	AC_SUBST(cppad_size_t_same_unsigned_int, 0)
+@@ -485,8 +485,8 @@ AC_PROG_RANLIB
+ dnl AC_PROG_CXX([compiler-search-list]) outputs CXX as C++ compiler to use
+ AC_PROG_CXX
+ AC_MSG_CHECKING([whether using Microsoft C++ compiler])
+-AM_CONDITIONAL(CppAD_MS_COMPILER, test "$CXX" == "cl" || test "$CXX" == "icl")
+-if test "$CXX" == "cl" || test "$CXX" == "icl"; then
++AM_CONDITIONAL(CppAD_MS_COMPILER, test "$CXX" = "cl" || test "$CXX" = "icl")
++if test "$CXX" = "cl" || test "$CXX" = "icl"; then
+ 	AC_MSG_RESULT([yes])
+ else
+ 	AC_MSG_RESULT([no])
+@@ -531,7 +531,7 @@ AC_CHECK_LIB(
+ 	[pthread="no"]
+ )
+ AM_CONDITIONAL(CppAD_PTHREAD, test "$pthread" = "yes")
+-if test "$pthread" == "yes" ; then
++if test "$pthread" = "yes" ; then
+ 	AC_SUBST(PTHREAD_LIB,"-lpthread")
+ else
+ 	AC_SUBST(PTHREAD_LIB,"")
+@@ -554,7 +554,7 @@ boost_thread_found='no'
+ if test "$BOOST_DIR" != '' ; then
+ 	CXXFLAGS="-I$BOOST_DIR/include $CXXFLAGS"
+ fi
+-if test "$BOOST_DIR" == '' && test "$boost_thread_found" == 'no' ; then
++if test "$BOOST_DIR" = '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib='-lboost_thread-mt'
+ 	LDFLAGS="$LDFLAGS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+@@ -566,7 +566,7 @@ if test "$BOOST_DIR" == '' && test "$boost_thread_found" == 'no' ; then
+ 		[boost_thread_found='no']
+ 	)
+ fi
+-if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
++if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread-mt.so"
+ 	LDFLAGS="$LDFLAGS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+@@ -578,7 +578,7 @@ if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
+ 		[boost_thread_found='no']
+ 	)
+ fi
+-if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
++if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread-mt.a"
+ 	LDFLAGS="$LDFLAGS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+@@ -590,7 +590,7 @@ if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
+ 		[boost_thread_found='no']
+ 	)
+ fi
+-if test "$BOOST_DIR" == '' && test "$boost_thread_found" == 'no' ; then
++if test "$BOOST_DIR" = '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib='-lboost_thread'
+ 	LDFLAGS="$LDFLAGS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+@@ -602,7 +602,7 @@ if test "$BOOST_DIR" == '' && test "$boost_thread_found" == 'no' ; then
+ 		[boost_thread_found='no']
+ 	)
+ fi
+-if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
++if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread.so"
+ 	LDFLAGS="$LDFLAGS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+@@ -614,7 +614,7 @@ if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
+ 		[boost_thread_found='no']
+ 	)
+ fi
+-if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
++if test "$BOOST_DIR" != '' && test "$boost_thread_found" = 'no' ; then
+ 	bthread_lib="$BOOST_DIR/lib/libboost_thread.a"
+ 	LDFLAGS="$LDFLAGS_save $bthread_lib"
+ 	AC_LINK_IFELSE(
+@@ -627,7 +627,7 @@ if test "$BOOST_DIR" != '' && test "$boost_thread_found" == 'no' ; then
+ 	)
+ fi
+ AM_CONDITIONAL(CppAD_BTHREAD, test "$boost_thread_found" = 'yes')
+-if test "$boost_thread_found" == 'yes' ; then
++if test "$boost_thread_found" = 'yes' ; then
+ 	AC_SUBST(BTHREAD_LIB,"$bthread_lib")
+ 	AC_MSG_RESULT([boost::thread library... yes])
+ else
+@@ -650,12 +650,12 @@ fi
+ AC_SUBST(CPPAD_IPOPT_LD_PATH, "$IPOPT_LD_PATH")
+ #
+ AC_SUBST(CPPAD_IPOPT_LIBS, "$IPOPT_LIBS -lipopt")
+-if test "$have_pkg_config" == "yes"; then
++if test "$have_pkg_config" = "yes"; then
+ 	dnl set CPPAD_IPOPT_LIBS
+ 	PKG_CONFIG_PATH="$IPOPT_DIR/lib/pkgconfig:$IPOPT_DIR/share/pkgconfig"
+ 	PKG_CONFIG_PATH="$PKG_CONFIG_PATH:$IPOPT_DIR/lib64/pkgconfig"
+ 	export PKG_CONFIG_PATH
+-	if pkg-config --libs ipopt >& /dev/null ; then
++	if pkg-config --libs ipopt > /dev/null 2>&1 ; then
+ 		CPPAD_IPOPT_LIBS=`pkg-config --libs ipopt`
+ 	else
+ 		dnl check for blas library
+@@ -696,7 +696,7 @@ dnl
+ AC_SUBST(cppad_description, "Differentiation of C++ Algorithms")
+ AC_SUBST(cppad_version, ${PACKAGE_VERSION} )
+ AC_SUBST(cppad_url, "http://www.coin-or.org/CppAD")
+-if test "$prefix" == "NONE" ; then
++if test "$prefix" = "NONE" ; then
+ 	cppad_cflags_value="-I$HOME/include"
+ 	cppad_libs_value="-L$HOME/lib"
+ else
+@@ -707,7 +707,7 @@ if test "$POSTFIX_DIR" != "" ; then
+ 	cppad_cflags_value="$cppad_cflags_value/$POSTFIX_DIR"
+ 	cppad_libs_value="$cppad_libs_value/$POSTFIX_DIR"
+ fi
+-if test "$IPOPT_DIR" == "" ; then
++if test "$IPOPT_DIR" = "" ; then
+ 	cppad_libs_value=""
+ 	cppad_requires_value=""
+ else