gentoo resync : 20.03.2022

4 files changed, 147 insertions, 0 deletions

diff --git a/sci-libs/cfitsio/Manifest b/sci-libs/cfitsio/Manifest
index b3385a5d23c8..1e58a2d29310 100644
--- a/sci-libs/cfitsio/Manifest
+++ b/sci-libs/cfitsio/Manifest
@@ -1,6 +1,10 @@
 AUX cfitsio-3.490-ldflags.patch 520 BLAKE2B 30943426915a9fe78756230ad82d700a605f9e95913b26741199c0db68ef8e69bd3efb901bf938d6bf2529d9359d3e97bd9823e6c871b8873aa368aebf097faa SHA512 8a78b2ba84bb5fc904c7e642410945674b9bee20fe36e46b1e7c0b4f369ef934cd75ded3f9fb9dcf465f11ae30d1e2fbfa5c0e70adf3c8264b96bca5238e31a2
 AUX cfitsio-3.490-pkgconfig.patch 613 BLAKE2B acdaedb24b8a06019346b44eade4cf9f8cdce93578a08354dab61bfa5e7979fd22ab5214676d0f08a8dde5bb70b10c0ec54527d25b73892aa6bbbe935614ee92 SHA512 46c2f7ae36529c4d3afc17afe2f22b2f21b1d5ecfa1d460fca8a95335bf94017c322412da67b57cd052ab98701e5f7776845fe30171cb400f97e2b4411497387
 AUX cfitsio-3.490-system-zlib.patch 2816 BLAKE2B eb16c43cc5be95877424469eeebc085a46fb37e78d0b2fb48db72d71c2bb05d5b85eaf6d7341ed07da25858765cb9902e1dcf8ef33f3ab42b191d2b7689976ed SHA512 4f05a0a35d6bcdc03676d9142d2cc46dd4df69aff4759464c2dc441753e7e3085c756059d2218e9deef9da91c27e760c0f73562bbc02b5a73e0044f47560ded8
+AUX cfitsio-4.0.0-pkgconfig.patch 560 BLAKE2B ca784b063cddb88ae6665d205dd91908499f1f1ae82ce185a9c45f8af972ffd4f4d5c075fb5bcaaddd639550785dff4aeb573efea3d87dc45e097811806a2532 SHA512 b4ceb89429c1e9139c8086cb6ab8dd0191678b8f868f36ee651b6b97779e16aeceec121cb5a6dac9dffc03add4f90469286a4134d7b31607614ec6a055d4c19e
+AUX cfitsio-4.0.0-system-zlib.patch 2406 BLAKE2B f17d54f549b4167d51eb073decd4924acad02c4239ea36fea78bd5c71a4f236d7285d669bd12c8e9de38468416e4262005bfd704ab5146353810bfd11c08036c SHA512 3d82bd4852619b1d10eb765f05e3dd03b8cc11dfac6f4eae48062b20b71e715c8eebe7c374fb83d38dfdb454fdb598a7b62a7d27f6517cc885d56189f4a0f2d7
 DIST cfitsio-3.49.tar.gz 4934662 BLAKE2B ca8b701f0fec399d989efb61fdaa2bfbf49d0eea2d3ff47e156757c5a99bc77c23a1b91b4c91166696293c71c78210065dc48d0bb3c77039815f326d0ed55f0a SHA512 9836a4af3bbbfed1ea1b4c70b9d500ac485d7c3d8131eb8a25ee6ef6662f46ba52b5161c45c709ed9a601ff0e9ec36daa5650eaaf4f2cc7d6f4bb5640f10da15
+DIST cfitsio-4.0.0.tar.gz 4746177 BLAKE2B a43a21d29522cac84294e81ad5f0a45839c21c2fafcbde42504670e73757a41ebd91e42d086529df8139ce920446332f827b1abf027f8932ee73dd025103cd8e SHA512 a5b20bd6ad648450e99167f63813cc7523347aadfc9f85d2c0ed3ba7e4516b3bb6bc0851f209268f2cb045cdacc43a3da9e4506af4581f806ab9f4de248065fa
 EBUILD cfitsio-3.490.ebuild 1718 BLAKE2B 6b89bbad5bc1876148a9360d47931bc3a03a3475a7860a01c1a6ea8ecd87d117c8f10eeff492664c2c284877b7d613aec1e926b472840dd8023b15bd9b0bc17f SHA512 a046886cb8c0e6ede4581128323f1959d24c27713e45f3443a4bfda7fed80f4917f17071a06acf34c891abe07d089ea24f4774f5cb1448da348c823ade163a31
+EBUILD cfitsio-4.0.0.ebuild 1682 BLAKE2B 7e6fd45d746a0d1dafa56d9de6c42000fdf513a7ca2d8d67b8266d3a593b0bbe399eeb2fbac00a3dcd24326f75e62e8c47dd7a86b34eddc6d8172295e05f8e2c SHA512 531824438b5b7527428287a951d165c8a19c6b6245662fbf42c1fd5fa42f5b11621c415b1a0681feead064f9881b38958c0b9127536140ce03041049f2cc057f
 MISC metadata.xml 736 BLAKE2B 460a16dc476e61655f45d7e300e6b556aec70a0fc1d85a832adf3fe1c75d0b657e2bdada3b7b04f5f24460b4fe50a5eecc83991047e70ea009acc565a0e50e7c SHA512 2896abb557ece0145f756ef1ef92a597c260b5a700aa6873efc253825e56524399cc4442c062588fd2eea8ed351385a1ffb23ebb4feb1b4b4b457c9be97e8676
diff --git a/sci-libs/cfitsio/cfitsio-4.0.0.ebuild b/sci-libs/cfitsio/cfitsio-4.0.0.ebuild
new file mode 100644
index 000000000000..33e1c7b7b075
--- /dev/null
+++ b/sci-libs/cfitsio/cfitsio-4.0.0.ebuild
@@ -0,0 +1,73 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit fortran-2 multilib-minimal
+
+DESCRIPTION="C and Fortran library for manipulating FITS files"
+HOMEPAGE="https://heasarc.gsfc.nasa.gov/docs/software/fitsio/fitsio.html"
+SRC_URI="https://heasarc.gsfc.nasa.gov/FTP/software/fitsio/c/${P}.tar.gz"
+
+LICENSE="ISC"
+SLOT="0/9"
+KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~sparc64-solaris"
+IUSE="bzip2 curl cpu_flags_x86_sse2 cpu_flags_x86_ssse3"
+
+BDEPEND="
+	sys-devel/bison
+	sys-devel/flex
+"
+RDEPEND="
+	sys-libs/zlib[${MULTILIB_USEDEP}]
+	bzip2? ( app-arch/bzip2[${MULTILIB_USEDEP}] )
+	curl? ( net-misc/curl[${MULTILIB_USEDEP}] )
+"
+# Bug #803350
+DEPEND="${RDEPEND}
+	<dev-lang/cfortran-20110621
+"
+
+PATCHES=(
+	"${FILESDIR}/${PN}-3.490-ldflags.patch"
+	"${FILESDIR}/${P}-system-zlib.patch"
+	"${FILESDIR}/${P}-pkgconfig.patch"
+)
+
+pkg_setup() {
+	fortran-2_pkg_setup
+}
+
+src_prepare() {
+	default
+
+	# Avoid internal cfortran
+	mv cfortran.h cfortran.h.disabled || die
+	ln -s "${EPREFIX}"/usr/include/cfortran.h . || die
+
+	multilib_copy_sources
+}
+
+multilib_src_configure() {
+	local myeconfargs=(
+		$(use_with bzip2)
+		$(use_enable curl)
+		$(use_enable cpu_flags_x86_sse2 sse2)
+		$(use_enable cpu_flags_x86_ssse3 ssse3)
+	)
+	ECONF_SOURCE="${S}" econf "${myeconfargs[@]}"
+}
+
+multilib_src_install_all() {
+	dodoc README docs/changes.txt
+
+	dodoc docs/{quick,cfitsio,fpackguide}.pdf
+	dodoc docs/fitsio.pdf
+
+	docinto examples
+	dodoc cookbook.c testprog.c speed.c smem.c
+	dodoc cookbook.f testf77.f
+
+	# Remove static libs
+	find "${ED}" -name '*.a' -delete || die
+}
diff --git a/sci-libs/cfitsio/files/cfitsio-4.0.0-pkgconfig.patch b/sci-libs/cfitsio/files/cfitsio-4.0.0-pkgconfig.patch
new file mode 100644
index 000000000000..4d743f2d32d9
--- /dev/null
+++ b/sci-libs/cfitsio/files/cfitsio-4.0.0-pkgconfig.patch
@@ -0,0 +1,20 @@
+diff --git a/cfitsio.pc.in b/cfitsio.pc.in
+index 7cc25c6..95fb9d0 100644
+--- a/cfitsio.pc.in
++++ b/cfitsio.pc.in
+@@ -1,12 +1,12 @@
+ prefix=@prefix@
+ exec_prefix=@exec_prefix@
+ libdir=@libdir@
+-includedir=@includedir@
++includedir=@includedir@/cfitsio
+ 
+ Name: cfitsio
+ Description: FITS File Subroutine Library
+ URL: https://heasarc.gsfc.nasa.gov/fitsio/
+ Version: @CFITSIO_MAJOR@.@CFITSIO_MINOR@.@CFITSIO_MICRO@
+ Libs: -L${libdir} -lcfitsio
+-Libs.private: -lm @LIBS@
+-Cflags: -I${includedir}
++Libs.private: -lm -lz @LIBS@
++Cflags: -D_REENTRANT -I${includedir}
diff --git a/sci-libs/cfitsio/files/cfitsio-4.0.0-system-zlib.patch b/sci-libs/cfitsio/files/cfitsio-4.0.0-system-zlib.patch
new file mode 100644
index 000000000000..f26f3d431505
--- /dev/null
+++ b/sci-libs/cfitsio/files/cfitsio-4.0.0-system-zlib.patch
@@ -0,0 +1,50 @@
+diff --git a/Makefile.in b/Makefile.in
+index d607eec..b646458 100644
+--- a/Makefile.in
++++ b/Makefile.in
+@@ -102,7 +102,7 @@ lib${PACKAGE}.a:	${OBJECTS}
+ shared: lib${PACKAGE}${SHLIB_SUFFIX}
+ 
+ lib${PACKAGE}${SHLIB_SUFFIX}: ${OBJECTS}
+-		${SHLIB_LD} ${LDFLAGS} -o ${CFITSIO_SHLIB} ${OBJECTS} -lm ${LIBS_CURL} ${LIBS}
++		${SHLIB_LD} ${LDFLAGS} -o ${CFITSIO_SHLIB} ${OBJECTS} -lm -lz -lbz2 ${LIBS_CURL} ${LIBS}
+ 		@if [ "x${CFITSIO_SHLIB_SONAME}" != x ]; then \
+ 			ln -sf ${CFITSIO_SHLIB} ${CFITSIO_SHLIB_SONAME}; \
+ 			ln -sf ${CFITSIO_SHLIB_SONAME} $@; \
+@@ -140,28 +140,28 @@ swapproc.o:	swapproc.c
+ 		${CC} -c ${CFLAGS} ${CPPFLAGS} ${SSE_FLAGS} ${DEFS} $<
+ 
+ smem:		smem.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz
+ 
+ testprog:	testprog.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ fpack:		fpack.o fpackutil.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ funpack:	funpack.o fpackutil.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ fitscopy:	fitscopy.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ speed:		speed.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ imcopy:		imcopy.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ cookbook:	cookbook.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ eval:		# Rebuild eval_* files from flex/bison source
+ 		${FLEX} -t eval.l > eval_l.c1