gentoo auto-resync : 26:06:2023 - 19:33:07

6 files changed, 0 insertions, 715 deletions

diff --git a/sci-libs/bliss/Manifest b/sci-libs/bliss/Manifest
index 493b3fb2ab76..49850b78ee7c 100644
--- a/sci-libs/bliss/Manifest
+++ b/sci-libs/bliss/Manifest
@@ -1,8 +1,3 @@
-AUX bliss-0.73-autotools.patch 3117 BLAKE2B d74cd207311cd1f6ef5be1c5c411493542146e8ba69fe0e40392458f758eec84411eedbe075ae8f3669fb4e8b6cdfb9e09db077c918db5d1b7203275d6004b05 SHA512 98333e4d97eca83776148b06e8ec41b283fa2a85a77a2c1281084a5af5efefb22ca34b9b6a11e2b9fdb71af944c6c56247291ea6721bd6d6dcf855e73116351e
-AUX bliss-0.73-clang.patch 457 BLAKE2B 2875a16231e17d6cb8079fc67ad74df69b126d626cbbd7ccf588d9e96da7fcf8e3d645af876e2311d415a37985e68c0df72aa53b5fbb5691d9dc45773e42e226 SHA512 f496b178645a34ed65dbd4829f7bd1a9aaaf7c1e91e50e2c0e8957f20c5908728ba307c2afcbf6912fac3cb927d6e9a07ba27b4bce327c6061912f6afe883402
-AUX bliss-0.73-error.patch 14317 BLAKE2B b053cf310604c57fb4a51d3c9dee8f780b7ad55d8c2b955cb033ac342f64d50aa18c064604f68206c8fce8c08f89bdb0faeb48701c8255beff1034326f93e261 SHA512 d4adcd652016d4b62e4b366cdbd5bd60f1dbaf89619e1d8d4dad6092a3dbb4e27e12aa13c1fc1f12481f144696b2e1392ecbc67dab0485959450d39013613a14
-AUX bliss-0.73-rehn.patch 1669 BLAKE2B 6e109c0bc59c0000603dd59467b989a572f502aa352a4b09cec85a608f90163175cb4babcfbc8495a246e8a3406186feeda366131c3c637a9aab93d9c698d36e SHA512 ae70ebcd3d9ef2f744e951dfb9cc2b48bee741ee7ead557a0fdfdacbd1895b015bb9a8da986fa36b084d4c92f7a28adad1df14c0814847d84c46f73cb69123b7
-AUX bliss-0.73.1.in 1482 BLAKE2B 740fc9aa59ab9ea7819a1785aa3f0609774f0b89b08ffe3276b002f0f55eb5332ffda4952a54aa91f621ec533e1cf08b734a9686ca727e528a311d209401782c SHA512 7eb1d08f9c40358ef986d8fe31d42eb90dc57879cb399f45dcf5df85eecdc6fd86208f1bf06c21a6875e5a3fb5a634d818edd75ce2ccd855910feeb22b714f4b
 AUX bliss-0.77-install.patch 822 BLAKE2B df619f62b9de4d7bcf988c47b938586a4d5f2c648fd6ec3f04fd7dde44d63b8d0724a936cb6c139d04a4d8d854eb114899c4c15eacf7ccbce3192d3bcf33ddd5 SHA512 d3c441569e15dbf5530129c4d0db75f996ced82c94b92d9a44202a31fa49d24c660c983f19d8b6b845018926b54d80d6ab07bfad04e9ac3a1d9559c155b38cdd
 DIST bliss-0.77.zip 117888 BLAKE2B ce4b2fa568c5520fe41748bf59a493af1c33ec9cc0732aca5e5ba657ca726e118e26763355778e3def5716d62e7d3aceceb592ef67e5e148c250d3ffffab67d7 SHA512 d210f137e614bca7cf0d88851d0c62292bf479b687bca6a25d9e42661825f882a4ff8c74c96a965bd9d4f246a1bda6b90cef64894914e6f7b17db6bf4a8f4b17
 EBUILD bliss-0.77.ebuild 651 BLAKE2B 88b49033455c58285f292c9f78077ec9d34c32a86dbc7cbbf58399e49db2261f965e6aa51ff3941ef79df1a732613315b89bcd45a5876ca2907fb1ffb6be4873 SHA512 71ff000764b75d580faa1da44caeba1338ca32253e4e930c37014a9229eced2e827048303bc7b1269a3e2de4e9f06caca8b69e09a467b4aa60ab48ea7ea5cbf1
diff --git a/sci-libs/bliss/files/bliss-0.73-autotools.patch b/sci-libs/bliss/files/bliss-0.73-autotools.patch
deleted file mode 100644
index efdbcb81b42a..000000000000
--- a/sci-libs/bliss/files/bliss-0.73-autotools.patch
+++ /dev/null
@@ -1,99 +0,0 @@
-Replace simple Makefile by autotools
-- allow shared library
-- parallel build
-- added pkg-config support
-
-Author: Christoph Junghans <junghans@gentoo.org>
-
-diff -Naur bliss-0.72-fedora/config/.dummy bliss-0.72/config/.dummy
---- bliss-0.72-fedora/config/.dummy	1969-12-31 17:00:00.000000000 -0700
-+++ bliss-0.72/config/.dummy	2013-04-28 14:43:06.143760368 -0600
-@@ -0,0 +1 @@
-+Dummy file to make patch create config dir, which is needed for autotools
-diff -Naur bliss-0.72-fedora/configure.ac bliss-0.72/configure.ac
---- bliss-0.72-fedora/configure.ac	1969-12-31 17:00:00.000000000 -0700
-+++ bliss-0.72/configure.ac	2013-04-28 14:40:42.283242722 -0600
-@@ -0,0 +1,32 @@
-+AC_PREREQ([2.65])
-+AC_INIT([bliss], [0.73], [Tommi.Junttil@kk.fi])
-+
-+AC_CONFIG_AUX_DIR(config)
-+AC_CONFIG_MACRO_DIR(config)
-+
-+AM_INIT_AUTOMAKE([1.8 foreign])
-+
-+SHARED_VERSION_INFO="1:0:0"
-+AC_SUBST(SHARED_VERSION_INFO)
-+
-+# Checks for programs.
-+AC_PROG_CXX
-+
-+LT_INIT
-+# Checks for libraries.
-+AC_ARG_WITH([gmp],
-+  [AS_HELP_STRING([--with-gmp], [enable support for GNU Multiple Precision Arithmetic Library @<:@default=check@:>@])],
-+  [], [with_gmp=no])
-+AS_IF([test "x$with_gmp" != xno],
-+  [AC_CHECK_HEADERS([gmp.h],,AC_MSG_ERROR([Cannot find gmp.h header]))
-+    AC_CHECK_LIB([gmp],_init,,AC_MSG_ERROR([Cannot find gmp library]))
-+    AC_SUBST([GMP],[-lgmp])
-+    [CPPFLAGS="$CPPFLAGS -DBLISS_USE_GMP"]])
-+
-+AC_CHECK_PROG(DOXYGEN,doxygen,doxygen,no)
-+AM_CONDITIONAL(HAVE_DOXYGEN,[test .$DOXYGEN != .no])
-+
-+AC_CONFIG_FILES([Makefile])
-+AC_CONFIG_FILES([bliss.pc])
-+AC_CONFIG_FILES([bliss.1])
-+AC_OUTPUT
-diff -Naur bliss-0.72-fedora/bliss.pc.in bliss-0.72/bliss.pc.in
---- bliss-0.72-fedora/bliss.pc.in	1969-12-31 17:00:00.000000000 -0700
-+++ bliss-0.72/bliss.pc.in	2013-04-28 14:40:54.223285686 -0600
-@@ -0,0 +1,13 @@
-+prefix=@prefix@
-+exec_prefix=@exec_prefix@
-+libdir=@libdir@
-+includedir=@includedir@
-+
-+Name: bliss
-+Description: Library for Computing Automorphism Groups and Canonical Labelings of Graphs 
-+URL: http://www.tcs.hut.fi/Software/bliss/index.shtml
-+Version: @VERSION@
-+Requires: 
-+Libs: -L${libdir} -lbliss @GMP@
-+Libs.private: -lm
-+Cflags: -I${includedir}
-diff -Naur bliss-0.72-fedora/Makefile.am bliss-0.72/Makefile.am
---- bliss-0.72-fedora/Makefile.am	1969-12-31 17:00:00.000000000 -0700
-+++ bliss-0.72/Makefile.am	2013-04-28 14:47:26.944698789 -0600
-@@ -0,0 +1,30 @@
-+ACLOCAL_AMFLAGS = -I config
-+
-+lib_LTLIBRARIES = libbliss.la
-+
-+libbliss_la_LDFLAGS = -no-undefined -version-info @SHARED_VERSION_INFO@
-+libbliss_la_SOURCES = \
-+	defs.cc graph.cc partition.cc orbit.cc uintseqhash.cc heap.cc \
-+	timer.cc utils.cc bliss_C.cc
-+
-+pkginclude_HEADERS = \
-+	bignum.hh bliss_C.h defs.hh graph.hh heap.hh kqueue.hh kstack.hh \
-+	orbit.hh partition.hh timer.hh uintseqhash.hh utils.hh
-+
-+bin_PROGRAMS = bliss
-+bliss_SOURCES = bliss.cc
-+bliss_LDADD = libbliss.la
-+dist_man1_MANS = bliss.1
-+
-+pkgconfigdir = $(libdir)/pkgconfig
-+pkgconfig_DATA = bliss.pc
-+
-+html-local: Doxyfile
-+if HAVE_DOXYGEN
-+	$(DOXYGEN) $(srcdir)/Doxyfile
-+else
-+	@echo "doxygen was not found, please re-run configure"
-+endif
-+
-+clean-local:
-+	-rm -rf html
diff --git a/sci-libs/bliss/files/bliss-0.73-clang.patch b/sci-libs/bliss/files/bliss-0.73-clang.patch
deleted file mode 100644
index 8a2e4bb6ca47..000000000000
--- a/sci-libs/bliss/files/bliss-0.73-clang.patch
+++ /dev/null
@@ -1,11 +0,0 @@
---- ./bliss.cc.orig	2020-07-10 10:34:44.946000000 -0600
-+++ ./bliss.cc	2020-07-10 10:35:36.076000000 -0600
-@@ -59,7 +59,7 @@
-   else program_name = argv0;  
-   if(!program_name or *program_name == 0) program_name = "bliss";
- 
--  fprintf(fp, "bliss version %s (compiled "__DATE__")\n", bliss::version);
-+  fprintf(fp, "bliss version %s (compiled %s)\n", bliss::version, __DATE__);
-   fprintf(fp, "Copyright 2003-2015 Tommi Junttila\n");
-   fprintf(fp,
- "\n"
diff --git a/sci-libs/bliss/files/bliss-0.73-error.patch b/sci-libs/bliss/files/bliss-0.73-error.patch
deleted file mode 100644
index cd0f5457219f..000000000000
--- a/sci-libs/bliss/files/bliss-0.73-error.patch
+++ /dev/null
@@ -1,471 +0,0 @@
---- ./bliss.cc.orig	2015-09-01 10:23:10.000000000 -0600
-+++ ./bliss.cc	2015-09-04 15:04:09.946602735 -0600
-@@ -276,13 +276,16 @@ main(const int argc, const char** argv)
-   if(opt_canonize == false)
-     {
-       /* No canonical labeling, only automorphism group */
--      g->find_automorphisms(stats, &report_aut, stdout);
-+      if (!g->find_automorphisms(stats, &report_aut, stdout))
-+	exit(1);
-     }
-   else
-     {
-       /* Canonical labeling and automorphism group */
-       const unsigned int* cl = g->canonical_form(stats, &report_aut, stdout);
- 
-+      if (!cl)
-+	exit(1);
-       fprintf(stdout, "Canonical labeling: ");
-       bliss::print_permutation(stdout, g->get_nof_vertices(), cl, 1);
-       fprintf(stdout, "\n");
-@@ -290,6 +293,8 @@ main(const int argc, const char** argv)
-       if(opt_output_can_file)
- 	{
- 	  bliss::AbstractGraph* cf = g->permute(cl);
-+	  if (!cf)
-+	    exit(1);
- 	  FILE* const fp = fopen(opt_output_can_file, "w");
- 	  if(!fp)
- 	    _fatal("Cannot open '%s' for outputting the canonical form, aborting", opt_output_can_file);
---- ./bliss_C.cc.orig	2015-09-01 10:23:10.000000000 -0600
-+++ ./bliss_C.cc	2015-09-04 15:04:09.945602814 -0600
-@@ -131,7 +131,7 @@ BlissGraph *bliss_permute(BlissGraph *gr
- }
- 
- extern "C"
--void
-+int
- bliss_find_automorphisms(BlissGraph *graph,
- 			 void (*hook)(void *user_param,
- 				      unsigned int n,
-@@ -142,7 +142,8 @@ bliss_find_automorphisms(BlissGraph *gra
-   bliss::Stats s;
-   assert(graph);
-   assert(graph->g);
--  graph->g->find_automorphisms(s, hook, hook_user_param);
-+  if (!graph->g->find_automorphisms(s, hook, hook_user_param))
-+    return 0;
- 
-   if(stats)
-     {
-@@ -154,6 +155,7 @@ bliss_find_automorphisms(BlissGraph *gra
-       stats->nof_generators = s.get_nof_generators();
-       stats->max_level = s.get_max_level();
-     }
-+  return 1;
- }
- 
- 
-@@ -173,7 +175,7 @@ bliss_find_canonical_labeling(BlissGraph
-   
-   canonical_labeling = graph->g->canonical_form(s, hook, hook_user_param);
- 
--  if(stats)
-+  if(canonical_labeling && stats)
-     {
-       stats->group_size_approx = s.get_group_size_approx();
-       stats->nof_nodes = s.get_nof_nodes();
---- ./bliss_C.h.orig	2015-09-01 10:23:10.000000000 -0600
-+++ ./bliss_C.h	2015-09-04 15:04:09.947602656 -0600
-@@ -156,6 +156,7 @@ unsigned int bliss_hash(BlissGraph *grap
-  * The argument \a perm should be an array of
-  * N=bliss::bliss_get_nof_vertices(\a graph) elements describing
-  * a bijection on {0,...,N-1}.
-+ * Returns NULL if insufficient memory or internal error.
-  */
- BlissGraph *bliss_permute(BlissGraph *graph, const unsigned int *perm);
- 
-@@ -174,8 +175,9 @@ BlissGraph *bliss_permute(BlissGraph *gr
-  * if you want to use the automorphism later, you have to take a copy of it.
-  * Do not call bliss_* functions in the hook.
-  * If \a stats is non-null, then some search statistics are copied there.
-+ * \return nonzero if successful, zero if insufficient memory or internal error
-  */
--void
-+int
- bliss_find_automorphisms(BlissGraph *graph,
- 			 void (*hook)(void *user_param,
- 				      unsigned int N,
-@@ -194,6 +196,7 @@ bliss_find_automorphisms(BlissGraph *gra
-  * then bliss_permute() with the returned canonical labeling.
-  * Note that the computed canonical version may depend on the applied version
-  * of bliss.
-+ * Returns NULL if insufficient memory or internal error.
-  */
- const unsigned int *
- bliss_find_canonical_labeling(BlissGraph *graph,
---- ./defs.cc.orig	2015-09-01 10:23:12.000000000 -0600
-+++ ./defs.cc	2015-09-04 15:04:09.947602656 -0600
-@@ -32,7 +32,6 @@ fatal_error(const char* fmt, ...)
-   vfprintf(stderr, fmt, ap);
-   fprintf(stderr, "\nAborting!\n");
-   va_end(ap);
--  exit(1);
- }
- 
- }
---- ./graph.cc.orig	2015-09-01 10:23:10.000000000 -0600
-+++ ./graph.cc	2015-09-04 15:04:09.927604245 -0600
-@@ -34,7 +34,10 @@
- namespace bliss {
- 
- #define _INTERNAL_ERROR() fatal_error("%s:%d: internal error",__FILE__,__LINE__)
--#define _OUT_OF_MEMORY() fatal_error("%s:%d: out of memory",__FILE__,__LINE__)
-+#define _OUT_OF_MEMORY(label) do {				\
-+    fatal_error("%s:%d: out of memory",__FILE__,__LINE__);	\
-+    goto label;							\
-+  } while (0)
- 
- /*-------------------------------------------------------------------------
-  *
-@@ -279,20 +282,6 @@ AbstractGraph::reset_permutation(unsigne
-     *perm = i;
- }
- 
--bool
--AbstractGraph::is_automorphism(unsigned int* const perm)
--{
--  _INTERNAL_ERROR();
--  return false;
--}
--
--bool
--AbstractGraph::is_automorphism(const std::vector<unsigned int>& perm) const
--{
--  _INTERNAL_ERROR();
--  return false;
--}
--
- 
- 
- 
-@@ -618,7 +607,7 @@ typedef struct {
- } PathInfo;
- 
- 
--void
-+bool
- AbstractGraph::search(const bool canonical, Stats& stats)
- {
-   const unsigned int N = get_nof_vertices();
-@@ -658,7 +647,7 @@ AbstractGraph::search(const bool canonic
-   if(N == 0)
-     {
-       /* Nothing to do, return... */
--      return;
-+      return true;
-     }
- 
-   /* Initialize the partition ... */
-@@ -696,10 +685,10 @@ AbstractGraph::search(const bool canonic
-    */
-   if(first_path_labeling) free(first_path_labeling);
-   first_path_labeling = (unsigned int*)calloc(N, sizeof(unsigned int));
--  if(!first_path_labeling) _OUT_OF_MEMORY();
-+  if(!first_path_labeling) _OUT_OF_MEMORY(oom1);
-   if(best_path_labeling) free(best_path_labeling);
-   best_path_labeling = (unsigned int*)calloc(N, sizeof(unsigned int));
--  if(!best_path_labeling) _OUT_OF_MEMORY();
-+  if(!best_path_labeling) _OUT_OF_MEMORY(oom2);
- 
-   /*
-    * Is the initial partition discrete?
-@@ -710,7 +699,7 @@ AbstractGraph::search(const bool canonic
-       update_labeling(best_path_labeling);
-       /* Update statistics */
-       stats.nof_leaf_nodes = 1;
--      return;
-+      return true;
-     }
- 
-   /*
-@@ -718,20 +707,39 @@ AbstractGraph::search(const bool canonic
-    */
-   if(first_path_labeling_inv) free(first_path_labeling_inv);
-   first_path_labeling_inv = (unsigned int*)calloc(N, sizeof(unsigned int));
--  if(!first_path_labeling_inv) _OUT_OF_MEMORY();
-+  if(!first_path_labeling_inv) _OUT_OF_MEMORY(oom3);
-   if(best_path_labeling_inv) free(best_path_labeling_inv);
-   best_path_labeling_inv = (unsigned int*)calloc(N, sizeof(unsigned int));
--  if(!best_path_labeling_inv) _OUT_OF_MEMORY();
-+  if(!best_path_labeling_inv) _OUT_OF_MEMORY(oom4);
- 
-   /*
-    * Allocate space for the automorphisms
-    */
-   if(first_path_automorphism) free(first_path_automorphism);
-   first_path_automorphism = (unsigned int*)malloc(N * sizeof(unsigned int));
--  if(!first_path_automorphism) _OUT_OF_MEMORY();
-+  if(!first_path_automorphism) _OUT_OF_MEMORY(oom5);
-   if(best_path_automorphism) free(best_path_automorphism);
-   best_path_automorphism = (unsigned int*)malloc(N * sizeof(unsigned int));
--  if(!best_path_automorphism) _OUT_OF_MEMORY();
-+  if(!best_path_automorphism) {
-+    _OUT_OF_MEMORY(oom6);
-+  oom6:
-+    free(first_path_automorphism);
-+    first_path_automorphism = NULL;
-+  oom5:
-+    free(best_path_labeling_inv);
-+    best_path_labeling_inv = NULL;
-+  oom4:
-+    free(first_path_labeling_inv);
-+    first_path_labeling_inv = NULL;
-+  oom3:
-+    free(best_path_labeling);
-+    best_path_labeling = NULL;
-+  oom2:
-+    free(first_path_labeling);
-+    first_path_labeling = NULL;
-+  oom1:
-+    return false;
-+  }
- 
-   /*
-    * Initialize orbit information so that all vertices are in their own orbits
-@@ -1203,8 +1211,10 @@ AbstractGraph::search(const bool canonic
- 
- #if defined(BLISS_VERIFY_EQUITABLEDNESS)
-       /* The new partition should be equitable */
--      if(!is_equitable())
-+      if(!is_equitable()) {
- 	fatal_error("consistency check failed - partition after refinement is not equitable");
-+	return false;
-+      }
- #endif
- 
-       /*
-@@ -1596,8 +1606,10 @@ AbstractGraph::search(const bool canonic
- 	
- #if defined(BLISS_VERIFY_AUTOMORPHISMS)
- 	/* Verify that it really is an automorphism */
--	if(!is_automorphism(best_path_automorphism))
-+	if(!is_automorphism(best_path_automorphism)) {
- 	  fatal_error("Best path automorhism validation check failed");
-+	  return false;
-+	}
- #endif
- 	
- 	unsigned int gca_level_with_first = 0;
-@@ -1664,6 +1676,7 @@ AbstractGraph::search(const bool canonic
- 
- 
-       _INTERNAL_ERROR();
-+      return false;
- 
-       
-     handle_first_path_automorphism:
-@@ -1699,8 +1712,10 @@ AbstractGraph::search(const bool canonic
- 
- #if defined(BLISS_VERIFY_AUTOMORPHISMS)
-       /* Verify that it really is an automorphism */
--      if(!is_automorphism(first_path_automorphism))
-+      if(!is_automorphism(first_path_automorphism)) {
- 	fatal_error("First path automorphism validation check failed");
-+	return false;
-+      }
- #endif
-       
-       if(opt_use_long_prune)
-@@ -1747,12 +1762,13 @@ AbstractGraph::search(const bool canonic
-   /* Release component recursion data in partition */
-   if(opt_use_comprec)
-     p.cr_free();
-+  return true;
- }
- 
- 
- 
- 
--void
-+bool
- AbstractGraph::find_automorphisms(Stats& stats,
- 				  void (*hook)(void *user_param,
- 					       unsigned int n,
-@@ -1762,7 +1778,8 @@ AbstractGraph::find_automorphisms(Stats&
-   report_hook = hook;
-   report_user_param = user_param;
- 
--  search(false, stats);
-+  if (!search(false, stats))
-+    return false;
- 
-   if(first_path_labeling)
-     {
-@@ -1774,6 +1791,7 @@ AbstractGraph::find_automorphisms(Stats&
-       free(best_path_labeling);
-       best_path_labeling = 0;
-     }
-+  return true;
- }
- 
- 
-@@ -1788,7 +1806,8 @@ AbstractGraph::canonical_form(Stats& sta
-   report_hook = hook;
-   report_user_param = user_param;
- 
--  search(true, stats);
-+  if (!search(true, stats))
-+    return NULL;
- 
-   return best_path_labeling;
- }
-@@ -3479,15 +3498,17 @@ Digraph::initialize_certificate()
-  * Check whether perm is an automorphism.
-  * Slow, mainly for debugging and validation purposes.
-  */
--bool
-+int
- Digraph::is_automorphism(unsigned int* const perm)
- {
-   std::set<unsigned int, std::less<unsigned int> > edges1;
-   std::set<unsigned int, std::less<unsigned int> > edges2;
- 
- #if defined(BLISS_CONSISTENCY_CHECKS)
--  if(!is_permutation(get_nof_vertices(), perm))
-+  if(!is_permutation(get_nof_vertices(), perm)) {
-     _INTERNAL_ERROR();
-+    return -1;
-+  }
- #endif
- 
-   for(unsigned int i = 0; i < get_nof_vertices(); i++)
-@@ -3506,7 +3527,7 @@ Digraph::is_automorphism(unsigned int* c
- 	  ei++)
- 	edges2.insert(*ei);
-       if(!(edges1 == edges2))
--	return false;
-+	return 0;
- 
-       edges1.clear();
-       for(std::vector<unsigned int>::iterator ei = v1.edges_out.begin();
-@@ -3519,10 +3540,10 @@ Digraph::is_automorphism(unsigned int* c
- 	  ei++)
- 	edges2.insert(*ei);
-       if(!(edges1 == edges2))
--	return false;
-+	return 0;
-     }
- 
--  return true;
-+  return 1;
- }
- 
- bool
-@@ -4337,8 +4358,10 @@ Graph*
- Graph::permute(const unsigned int* perm) const
- {
- #if defined(BLISS_CONSISTENCY_CHECKS)
--  if(!is_permutation(get_nof_vertices(), perm))
-+  if(!is_permutation(get_nof_vertices(), perm)) {
-     _INTERNAL_ERROR();
-+    return NULL;
-+  }
- #endif
- 
-   Graph* const g = new Graph(get_nof_vertices());
-@@ -5278,15 +5301,17 @@ Graph::initialize_certificate()
-  *
-  *-------------------------------------------------------------------------*/
- 
--bool
-+int
- Graph::is_automorphism(unsigned int* const perm)
- {
-   std::set<unsigned int, std::less<unsigned int> > edges1;
-   std::set<unsigned int, std::less<unsigned int> > edges2;
- 
- #if defined(BLISS_CONSISTENCY_CHECKS)
--  if(!is_permutation(get_nof_vertices(), perm))
-+  if(!is_permutation(get_nof_vertices(), perm)) {
-     _INTERNAL_ERROR();
-+    return -1;
-+  }
- #endif
- 
-   for(unsigned int i = 0; i < get_nof_vertices(); i++)
-@@ -5306,10 +5331,10 @@ Graph::is_automorphism(unsigned int* con
- 	edges2.insert(*ei);
- 
-       if(!(edges1 == edges2))
--	return false;
-+	return 0;
-     }
- 
--  return true;
-+  return 1;
- }
- 
- 
---- ./graph.hh.orig	2015-09-01 10:23:10.000000000 -0600
-+++ ./graph.hh	2015-09-04 15:09:17.261182632 -0600
-@@ -159,7 +159,7 @@ public:
-    * Check whether \a perm is an automorphism of this graph.
-    * Unoptimized, mainly for debugging purposes.
-    */
--  virtual bool is_automorphism(const std::vector<unsigned int>& perm) const;
-+  virtual bool is_automorphism(const std::vector<unsigned int>& perm) const = 0;
- 
- 
-   /** Activate/deactivate failure recording.
-@@ -211,8 +211,10 @@ public:
-    * if you want to use the automorphism later, you have to take a copy of it.
-    * Do not call any member functions in the hook.
-    * The search statistics are copied in \a stats.
-+   * \return true if successful, false if insufficient memory to search or
-+   * other internal error.
-    */
--  void find_automorphisms(Stats& stats,
-+  bool find_automorphisms(Stats& stats,
- 			  void (*hook)(void* user_param,
- 				       unsigned int n,
- 				       const unsigned int* aut),
-@@ -232,6 +234,8 @@ public:
-    * Note that the computed canonical version may depend on the applied version
-    * of bliss as well as on some other options (for instance, the splitting
-    * heuristic selected with bliss::Graph::set_splitting_heuristic()).
-+   * This function returns NULL if there is insufficient memory, or another
-+   * internal error occurs.
-    */
-   const unsigned int* canonical_form(Stats& stats,
- 				     void (*hook)(void* user_param,
-@@ -436,7 +440,7 @@ protected:
-   void reset_permutation(unsigned int *perm);
- 
-   /* Mainly for debugging purposes */
--  virtual bool is_automorphism(unsigned int* const perm);
-+  virtual int is_automorphism(unsigned int* const perm) = 0;
- 
-   std::vector<unsigned int> certificate_current_path;
-   std::vector<unsigned int> certificate_first_path;
-@@ -450,7 +454,11 @@ protected:
-   virtual Partition::Cell* find_next_cell_to_be_splitted(Partition::Cell *cell) = 0;
- 
- 
--  void search(const bool canonical, Stats &stats);
-+  /**
-+   * \return true if successful, false if insufficient memory to complete or
-+   * other internal error
-+   */
-+  bool search(const bool canonical, Stats &stats);
- 
- 
-   void (*report_hook)(void *user_param,
-@@ -634,7 +642,7 @@ protected:
- 
-   void initialize_certificate();
-   
--  bool is_automorphism(unsigned int* const perm);
-+  int is_automorphism(unsigned int* const perm);
- 
- 
-   bool nucr_find_first_component(const unsigned int level);
-@@ -875,7 +883,7 @@ protected:
- 
-   void initialize_certificate();
- 
--  bool is_automorphism(unsigned int* const perm);
-+  int is_automorphism(unsigned int* const perm);
- 
-   void sort_edges();
- 
diff --git a/sci-libs/bliss/files/bliss-0.73-rehn.patch b/sci-libs/bliss/files/bliss-0.73-rehn.patch
deleted file mode 100644
index f37eedb4a6bd..000000000000
--- a/sci-libs/bliss/files/bliss-0.73-rehn.patch
+++ /dev/null
@@ -1,74 +0,0 @@
---- ./graph.cc.orig	2015-09-04 15:04:09.927604245 -0600
-+++ ./graph.cc	2015-09-04 15:09:46.999819514 -0600
-@@ -597,16 +597,6 @@ public:
- };
- 
- 
--
--
--typedef struct {
--  unsigned int splitting_element;
--  unsigned int certificate_index;
--  unsigned int subcertificate_length;
--  UintSeqHash eqref_hash;
--} PathInfo;
--
--
- bool
- AbstractGraph::search(const bool canonical, Stats& stats)
- {
-@@ -753,7 +743,6 @@ AbstractGraph::search(const bool canonic
-   initialize_certificate();
- 
-   std::vector<TreeNode> search_stack;
--  std::vector<PathInfo> first_path_info;
-   std::vector<PathInfo> best_path_info;
- 
-   search_stack.clear();
-@@ -5477,7 +5466,7 @@ Graph::nucr_find_first_component(const u
-   component.clear();
-   component_elements = 0;
-   sh_return = 0;
--  unsigned int sh_first  = 0;
-+  unsigned int sh_first  = 1 << 31;
-   unsigned int sh_size   = 0;
-   unsigned int sh_nuconn = 0;
- 
---- ./graph.hh.orig	2015-09-04 15:09:17.261182632 -0600
-+++ ./graph.hh	2015-09-04 15:09:47.001819355 -0600
-@@ -109,9 +109,12 @@ public:
-   unsigned long int get_max_level() const {return max_level;}
- };
- 
--
--
--
-+typedef struct {
-+  unsigned int splitting_element;
-+  unsigned int certificate_index;
-+  unsigned int subcertificate_length;
-+  UintSeqHash eqref_hash;
-+} PathInfo;
- 
- 
- /**
-@@ -524,7 +527,7 @@ protected:
-    */
-   unsigned int cr_component_elements;
- 
--
-+  std::vector<PathInfo> first_path_info;
- 
- 
- };
-@@ -756,6 +759,10 @@ public:
-   void set_splitting_heuristic(const SplittingHeuristic shs) {sh = shs; }
-   
- 
-+  /**
-+   * Get an information vector about the first path.
-+   */
-+  std::vector<PathInfo> get_first_path_info() { return first_path_info; }
- };
- 
- 
diff --git a/sci-libs/bliss/files/bliss-0.73.1.in b/sci-libs/bliss/files/bliss-0.73.1.in
deleted file mode 100644
index f652c3d1307a..000000000000
--- a/sci-libs/bliss/files/bliss-0.73.1.in
+++ /dev/null
@@ -1,55 +0,0 @@
-.TH "BLISS" "1" "@VERSION@" "Tommi Junttila & Petteri Kaski" "User Commands"
-.SH "NAME"
-bliss \- Compute automorphism groups and canonical labelings of graphs
-.SH "SYNOPSIS"
-.B bliss
-[\fIOPTIONS\fR] [<\fIGRAPH FILE\fR>]
-.SH "DESCRIPTION"
-.PP
-Bliss is an open source tool for computing automorphism groups and
-canonical forms of graphs.  The graphs are specified in DIMACS format.
-.TP
-\fB\-directed\fR
-the input graph is directed
-.TP
-\fB\-can\fR
-compute canonical form
-.TP
-\fB\-ocan\fR=\fIf\fR
-compute canonical form and output it in file \fIf\fR
-.TP
-\fB\-v\fR=\fIN\fR
-set verbosity level to N [N >= 0, default: 1]
-.TP
-\fB\-sh\fR=\fIX\fR
-select splitting heuristics, where X is:
-.TS
-tab(;);
-R L.
-f;first non-singleton cell
-fl;first largest non-singleton cell
-fs;first smallest non-singleton cell
-fm;first maximally non-trivially connected non-singleton cell
-flm;first largest maximally non-trivially connected
-;non-singleton cell
-fsm;first smallest maximally non-trivially connected
-;non-singleton cell (default)
-.TE
-.TP
-\fB\-fr\fR=\fIX\fR
-use failure recording? [X=y/n, default: y]
-.TP
-\fB\-cr\fR=\fIX\fR
-use component recursion? [X=y/n, default: y]
-.TP
-\fB\-version\fR
-print the version number and exit
-.TP
-\fB\-help\fR
-print this help and exit
-.SH "AUTHORS"
-Bliss was written by Tommi Junttila <Tommi.Junttila@tkk.fi> and
-Petteri Kaski <petteri.kaski@aalto.fi>.
-.PP
-This man page was written by Jerry James <loganjerry@gmail.com>.
-It is distributed under the same terms as bliss.