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authorV3n3RiX <venerix@redcorelinux.org>2021-09-16 22:05:01 +0100
committerV3n3RiX <venerix@redcorelinux.org>2021-09-16 22:05:01 +0100
commitcc4618c9ba3d974948ebf340b542d8cb01db2f55 (patch)
tree125ee67bb9e0d548771cf7b61d04bb1f0dc57687 /sci-chemistry
parent677b7ba5c317778df2ad7e70df94b9b7eec4adbc (diff)
gentoo resync : 16.09.2021
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/GromacsWrapper/Manifest2
-rw-r--r--sci-chemistry/GromacsWrapper/metadata.xml2
-rw-r--r--sci-chemistry/MDAnalysis/Manifest2
-rw-r--r--sci-chemistry/MDAnalysis/metadata.xml2
-rw-r--r--sci-chemistry/Manifest.gzbin10864 -> 10836 bytes
-rw-r--r--sci-chemistry/aqua/Manifest2
-rw-r--r--sci-chemistry/aqua/metadata.xml2
-rw-r--r--sci-chemistry/autodock/Manifest2
-rw-r--r--sci-chemistry/autodock/metadata.xml2
-rw-r--r--sci-chemistry/autodock_vina/Manifest2
-rw-r--r--sci-chemistry/autodock_vina/metadata.xml2
-rw-r--r--sci-chemistry/avogadro2/Manifest2
-rw-r--r--sci-chemistry/avogadro2/metadata.xml2
-rw-r--r--sci-chemistry/bodr/Manifest2
-rw-r--r--sci-chemistry/bodr/metadata.xml2
-rw-r--r--sci-chemistry/cara-bin/Manifest2
-rw-r--r--sci-chemistry/cara-bin/metadata.xml2
-rw-r--r--sci-chemistry/chemex/Manifest2
-rw-r--r--sci-chemistry/chemex/metadata.xml2
-rw-r--r--sci-chemistry/chemical-mime-data/Manifest2
-rw-r--r--sci-chemistry/chemical-mime-data/metadata.xml2
-rw-r--r--sci-chemistry/chemtool/Manifest2
-rw-r--r--sci-chemistry/chemtool/metadata.xml2
-rw-r--r--sci-chemistry/clashlist/Manifest2
-rw-r--r--sci-chemistry/clashlist/metadata.xml2
-rw-r--r--sci-chemistry/cluster/Manifest2
-rw-r--r--sci-chemistry/cluster/metadata.xml2
-rw-r--r--sci-chemistry/dssp/Manifest2
-rw-r--r--sci-chemistry/dssp/metadata.xml2
-rw-r--r--sci-chemistry/easychem/Manifest2
-rw-r--r--sci-chemistry/easychem/metadata.xml2
-rw-r--r--sci-chemistry/elem/Manifest2
-rw-r--r--sci-chemistry/elem/metadata.xml2
-rw-r--r--sci-chemistry/gelemental/Manifest2
-rw-r--r--sci-chemistry/gelemental/metadata.xml2
-rw-r--r--sci-chemistry/gnome-chemistry-utils/Manifest2
-rw-r--r--sci-chemistry/gnome-chemistry-utils/metadata.xml2
-rw-r--r--sci-chemistry/gperiodic/Manifest2
-rw-r--r--sci-chemistry/gperiodic/metadata.xml2
-rw-r--r--sci-chemistry/gromacs/Manifest6
-rw-r--r--sci-chemistry/gromacs/gromacs-2021.3.ebuild355
-rw-r--r--sci-chemistry/gromacs/metadata.xml2
-rw-r--r--sci-chemistry/ksdssp/Manifest2
-rw-r--r--sci-chemistry/ksdssp/metadata.xml2
-rw-r--r--sci-chemistry/mdtraj/Manifest4
-rw-r--r--sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild3
-rw-r--r--sci-chemistry/mdtraj/metadata.xml2
-rw-r--r--sci-chemistry/metadata.xml2
-rw-r--r--sci-chemistry/mm-align/Manifest2
-rw-r--r--sci-chemistry/mm-align/metadata.xml2
-rw-r--r--sci-chemistry/modeller/Manifest2
-rw-r--r--sci-chemistry/modeller/metadata.xml2
-rw-r--r--sci-chemistry/molden/Manifest2
-rw-r--r--sci-chemistry/molden/metadata.xml2
-rw-r--r--sci-chemistry/moldy/Manifest2
-rw-r--r--sci-chemistry/moldy/metadata.xml2
-rw-r--r--sci-chemistry/molequeue/Manifest2
-rw-r--r--sci-chemistry/molequeue/metadata.xml2
-rw-r--r--sci-chemistry/molmol/Manifest2
-rw-r--r--sci-chemistry/molmol/metadata.xml2
-rw-r--r--sci-chemistry/molscript/Manifest2
-rw-r--r--sci-chemistry/molscript/metadata.xml2
-rw-r--r--sci-chemistry/molsketch/Manifest2
-rw-r--r--sci-chemistry/molsketch/metadata.xml2
-rw-r--r--sci-chemistry/mopac7/Manifest2
-rw-r--r--sci-chemistry/mopac7/metadata.xml2
-rw-r--r--sci-chemistry/mpqc/Manifest2
-rw-r--r--sci-chemistry/mpqc/metadata.xml2
-rw-r--r--sci-chemistry/msms-bin/Manifest2
-rw-r--r--sci-chemistry/msms-bin/metadata.xml2
-rw-r--r--sci-chemistry/mustang/Manifest2
-rw-r--r--sci-chemistry/mustang/metadata.xml2
-rw-r--r--sci-chemistry/namd/Manifest2
-rw-r--r--sci-chemistry/namd/metadata.xml2
-rw-r--r--sci-chemistry/nmrglue/Manifest2
-rw-r--r--sci-chemistry/nmrglue/metadata.xml2
-rw-r--r--sci-chemistry/numbat/Manifest2
-rw-r--r--sci-chemistry/numbat/metadata.xml2
-rw-r--r--sci-chemistry/openbabel-perl/Manifest2
-rw-r--r--sci-chemistry/openbabel-perl/metadata.xml2
-rw-r--r--sci-chemistry/openbabel/Manifest2
-rw-r--r--sci-chemistry/openbabel/metadata.xml2
-rw-r--r--sci-chemistry/pdbcat/Manifest2
-rw-r--r--sci-chemistry/pdbcat/metadata.xml2
-rw-r--r--sci-chemistry/pdbcns/Manifest2
-rw-r--r--sci-chemistry/pdbcns/metadata.xml2
-rw-r--r--sci-chemistry/pdbmat/Manifest2
-rw-r--r--sci-chemistry/pdbmat/metadata.xml2
-rw-r--r--sci-chemistry/povscript+/Manifest2
-rw-r--r--sci-chemistry/povscript+/metadata.xml2
-rw-r--r--sci-chemistry/prekin/Manifest2
-rw-r--r--sci-chemistry/prekin/metadata.xml2
-rw-r--r--sci-chemistry/probe/Manifest2
-rw-r--r--sci-chemistry/probe/metadata.xml2
-rw-r--r--sci-chemistry/procheck/Manifest2
-rw-r--r--sci-chemistry/procheck/metadata.xml2
-rw-r--r--sci-chemistry/propka/Manifest2
-rw-r--r--sci-chemistry/propka/metadata.xml2
-rw-r--r--sci-chemistry/psi/Manifest2
-rw-r--r--sci-chemistry/psi/metadata.xml2
-rw-r--r--sci-chemistry/pymol/Manifest2
-rw-r--r--sci-chemistry/pymol/metadata.xml2
-rw-r--r--sci-chemistry/raster3d/Manifest2
-rw-r--r--sci-chemistry/raster3d/metadata.xml2
-rw-r--r--sci-chemistry/suitename/Manifest2
-rw-r--r--sci-chemistry/suitename/metadata.xml2
-rw-r--r--sci-chemistry/surf/Manifest2
-rw-r--r--sci-chemistry/surf/metadata.xml2
-rw-r--r--sci-chemistry/theseus/Manifest2
-rw-r--r--sci-chemistry/theseus/metadata.xml2
-rw-r--r--sci-chemistry/threeV/Manifest2
-rw-r--r--sci-chemistry/threeV/metadata.xml2
-rw-r--r--sci-chemistry/tinker/Manifest2
-rw-r--r--sci-chemistry/tinker/metadata.xml2
-rw-r--r--sci-chemistry/tm-align/Manifest2
-rw-r--r--sci-chemistry/tm-align/metadata.xml2
-rw-r--r--sci-chemistry/vmd/Manifest2
-rw-r--r--sci-chemistry/vmd/metadata.xml2
-rw-r--r--sci-chemistry/votca-csg/Manifest2
-rw-r--r--sci-chemistry/votca-csg/metadata.xml2
-rw-r--r--sci-chemistry/votca-csgapps/Manifest2
-rw-r--r--sci-chemistry/votca-csgapps/metadata.xml2
-rw-r--r--sci-chemistry/votca-ctp/Manifest2
-rw-r--r--sci-chemistry/votca-ctp/metadata.xml2
-rw-r--r--sci-chemistry/votca-xtp/Manifest2
-rw-r--r--sci-chemistry/votca-xtp/metadata.xml2
-rw-r--r--sci-chemistry/wxmacmolplt/Manifest2
-rw-r--r--sci-chemistry/wxmacmolplt/metadata.xml2
-rw-r--r--sci-chemistry/xds-bin/Manifest2
-rw-r--r--sci-chemistry/xds-bin/metadata.xml2
-rw-r--r--sci-chemistry/xyza2pipe/Manifest2
-rw-r--r--sci-chemistry/xyza2pipe/metadata.xml2
132 files changed, 490 insertions, 132 deletions
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 354392f748c2..305cef292678 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1,4 +1,4 @@
AUX GromacsWrapper-0.8.0-tests-package.patch 594 BLAKE2B 6b2c7c1aebebfbb5222c84e67805806aae714b8c96cbaad568b7ecb2959e38d504ea5a18a1de4bfcbfeea4488b04182d1cdbd0664511bfeb3cae2bd27534e8f7 SHA512 92b0232092ee9230050c114906ea61136d03de7b417d7267ef194c751bc801ab6f35d882681c36bb28949cddbea5e3c1c413df6ec949a073fcccd59b5433fefa
DIST GromacsWrapper-0.8.0.tar.gz 1205837 BLAKE2B 3627e56df0dc6ba86caac67795416c7c8c187aaa4fac545600d17dcd799cb153feaab61a0f0632e051c4e9c0b4cd74f8e165156873e36bc53571bec78e5fca61 SHA512 da7215216c9a2b52094bb7e43e04f1b429c4893ba67b4bd850fe68e99f338813392fd9d0aa1b19d3398c694be964bc2badbf1b3623420da929ee4abcef18026f
EBUILD GromacsWrapper-0.8.0-r1.ebuild 999 BLAKE2B 79622ebe01dd515f3f3697700a8493c7ddcbcf92bf64f81e61fbe7924a7ac37639dcb01794e5118e3f447bc5de3962f434610b41e3000961bd212a7261700adf SHA512 0941c46ab84522a06a6c26853ed593ca6ff315dc97d1bbbfe366d60e4aefb4221e10f2faa778030d0a19de9045a2d57ef94d37a0560f272e8ff876264dceecb0
-MISC metadata.xml 482 BLAKE2B 2745b575ac325e9f8c53d53026ca0c67201f1519725c572813c0ad281b4a39399cbf93176e816646aa83f829c0981ee4457e3ab2232ed095f76d5a2068840912 SHA512 4f2efb8d263f20e50928e0c6f0913c65da746b5253a14658273c830b7f95ecc15620f92e87db9670adfd92792e96cc352af528ed4fa1e874977a744d2e15c6bf
+MISC metadata.xml 483 BLAKE2B 1d8a7e888d8b95bd229ef72894ba02f583e3e3958f9cd5733ab6b466312bac0b0f5a9004135caa37a3ef137e8782fa93ff4bb90f35f31c058d8c528025b193d0 SHA512 70e5dc653ff21a0395b946e5f3548320d2abb8c63ae9f3ce04be6768e20b02ce55a612a2ad12b6c2262529ab753ca9fda02d9bdae7f6ac859bca49bbbad6f75f
diff --git a/sci-chemistry/GromacsWrapper/metadata.xml b/sci-chemistry/GromacsWrapper/metadata.xml
index e8b6e94ed2a1..0096486f68a8 100644
--- a/sci-chemistry/GromacsWrapper/metadata.xml
+++ b/sci-chemistry/GromacsWrapper/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>alexxy@gentoo.org</email>
diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index 59b390ca1609..a308ba17a972 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1,3 +1,3 @@
DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195
EBUILD MDAnalysis-1.0.0.ebuild 1115 BLAKE2B ab8aae2678843840557bfde1866890cbe671cab0f670d1dc253523d070e231b44268d803b8c3c03648d8536f2cf6a734affc8fbcbb9ae62956deb60d1254b19c SHA512 7099a21fcfef94938f5c2b7bc590fbebadeb94ccc35f73f36abc470038c7aa45ea5563390eb09db9162f2060a57ebba69a2c984c2c8b560247f03acb8b446c4c
-MISC metadata.xml 496 BLAKE2B 1b6faf13663ab39bbb2c5b123f67cd7688c188459133d77411c857bd901f8133f9791d8c54e8fe7dc84e8150187b6562f297e706d36e167b3c20cf7df6e6a682 SHA512 674265a9bdb74cc5d4b059ce2b33cdba84bee097bb5940b3cc55cfdc6b74de5f28a4cfa34e9f0fd4db5d3c336a6f7b3be39235c2d9697d5adf9c7311e348d8a1
+MISC metadata.xml 497 BLAKE2B ddd8c6379dfe6b6fe33160d31bda254774e0c8eb5f862cc51560097efc5c273fa972388c6fe8fb1bbedc11ab125a5487bb1d19002489be967fa3e8e209d7cc81 SHA512 03c1eb9bef1bc10d600169b221c65c87794f8b9bf8d0efb1dc6ddaa61a09d665722ed7d32087e3137b36aa7256b76371b9ce2cc92b34b1ed7d1c78ede6550287
diff --git a/sci-chemistry/MDAnalysis/metadata.xml b/sci-chemistry/MDAnalysis/metadata.xml
index 6b7aa8ce58ab..31c543b5ba11 100644
--- a/sci-chemistry/MDAnalysis/metadata.xml
+++ b/sci-chemistry/MDAnalysis/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci@gentoo.org</email>
diff --git a/sci-chemistry/Manifest.gz b/sci-chemistry/Manifest.gz
index 54ba54961282..3081663b0b39 100644
--- a/sci-chemistry/Manifest.gz
+++ b/sci-chemistry/Manifest.gz
Binary files differ
diff --git a/sci-chemistry/aqua/Manifest b/sci-chemistry/aqua/Manifest
index 8b898e424fa6..de2fa35a0b3d 100644
--- a/sci-chemistry/aqua/Manifest
+++ b/sci-chemistry/aqua/Manifest
@@ -2,4 +2,4 @@ AUX aqua-3.2-flags.patch 4211 BLAKE2B 032048ea0f08aa798758489beda88aa0f07635e7ee
DIST aqua-3.2-nmr_manual.tar.gz 632031 BLAKE2B 1f595a111af4b5e91fc059b5af590a6c37a44654fcae42e6003b40cf7fdf542cb772d3ef25bf2475455ce8638cd0aebcbbc8c66bb57688ce919af2eac9b535cb SHA512 9b125b03507afebf15301c893efffae9be4e9695b9c577e5c2a80e83b620d04b4c27e867adf06336afa1556eddc96aa97de936028e503b1e85e156542664da0f
DIST aqua3.2.tar.gz 688408 BLAKE2B 898e0e3bbc4ff7b6ce8a8128ce6ffef45db607c74e2d78a70cefc26818d39049e4d18159b65250a3651112f64318ccce838037e563d3a985be7ef369d89b594e SHA512 1939f662a68122da613368aa106d7a31525903014420035eba9d10c3bd99b04d654d156328d308673003854233a02c1da48c036f3187fa1f0f303cc5928edd6a
EBUILD aqua-3.2-r3.ebuild 2087 BLAKE2B 053412cfb8802a1fd07e2ab53e19d8cca8f422063bd0d64723e2152b4d2fce4fc4597db2fd906b08b899937fac27c390abf73e1638f0a77f356e3bf86dea7d7f SHA512 1d5e6cdefb415613ade4170837b0092772a2c76bbb29b4c10e6ef75044f380c724371509fc5ec50144828bc6dcbd04b282135a0147561b424267331ad79b802a
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/aqua/metadata.xml b/sci-chemistry/aqua/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/aqua/metadata.xml
+++ b/sci-chemistry/aqua/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/autodock/Manifest b/sci-chemistry/autodock/Manifest
index 45cbb04a2703..3c54d983af4c 100644
--- a/sci-chemistry/autodock/Manifest
+++ b/sci-chemistry/autodock/Manifest
@@ -1,4 +1,4 @@
AUX autodock-4.2.6-buildsystem.patch 1480 BLAKE2B 3f1884ee05e062cb630b43fe3e8ecf6f827ada23d5d3060a5bb3d7e854f7c5e2d2b1f7a476c4effcdcbab4292b33fae093474773a31a6995465d00dbbb721246 SHA512 9c5b05f4831049c2c064358df26124526973110ddd31ffa7930f185694f9258dfce648085a96f05a2173aa61b4cdcda7a6fe170a56160708e031fb248f9e6bbe
DIST autodocksuite-4.2.6-src.tar.gz 35438010 BLAKE2B 88e036ecc0492fb83f31b90fd0983ec57d889a61d17249f672a3e30e942f6c329dc2494088a8fc7c5bc39a5bdbb38fb1514f1750c7145374f202a928d477faa9 SHA512 75b8878f948c4f6bc28adb442997192dad0c36bbede2fd698623903cb27b06b4df3ba038bfc70fc13b4bdee864fd2344f0f7208be2020da4e01a00b842b46bbb
EBUILD autodock-4.2.6.ebuild 2337 BLAKE2B 3302c9d3690f3faf97ef2265512de2c31b0b83752ed92375ecc822e42125eb50324a97197131b5280c71e1a165d1052f4250d06ed412d0b86034464168e9ef49 SHA512 3f215c0d54059f77da1623a9d5602e81e652d84382b327c3deee86f8cdb2d5392476d62288452881977f1582fa36474c648e7e519b5cf7fd7d1a926778697941
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/autodock/metadata.xml b/sci-chemistry/autodock/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/autodock/metadata.xml
+++ b/sci-chemistry/autodock/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/autodock_vina/Manifest b/sci-chemistry/autodock_vina/Manifest
index 4aa7ee3a38fc..ef72e15f2c1f 100644
--- a/sci-chemistry/autodock_vina/Manifest
+++ b/sci-chemistry/autodock_vina/Manifest
@@ -3,4 +3,4 @@ AUX autodock_vina-1.1.2-boost-filesystem.patch 2936 BLAKE2B 70c55e95e9728221ba80
AUX autodock_vina-1.1.2-missing-debug-decl.patch 365 BLAKE2B 959b46facdce27850a1f9fd6c66ecc297e4ad089e79896b9fe2127e425bd1bfcfce5d676cf2e4336c47d3a72b0e8319c791fdf1a5807f244cf5b4528de8cbb25 SHA512 ddbdca76fca16b46fd042b57eb941b7ba67f59f46c35dc18428ea6873c8ed5f03051247b8c667a08af8de40fccb0caf851848bb9082536225cacf8eb3e313c98
DIST autodock_vina_1_1_2.tgz 67366 BLAKE2B dc754bf522795ebfbfcf89a2df4e3761d941c1f0ce05cf56898720c1e855f5dd00fd2a583f5a8d218fa2e738d37e014a9b3239b9aa989b9018a6a33f8f0bd02c SHA512 f704af322ebc192117c49d0cf8a3f217105beccb7b47d6361665470894ef7a9f91fc4b5f07cc9aff56e497bfa80953e40e39090c8394a095c61597756e333ae9
EBUILD autodock_vina-1.1.2-r1.ebuild 951 BLAKE2B 5b7805c212b019aca0be53fe329a1a8dcb423d8e6c2516256aa37417a991b57349c0567c9cc4a4da8e31651fee0e2cc370e6ee481ae9e160c901dd44c4158b1e SHA512 2d332538c9cf9d8b6ad2f742edfb83c27f97d18bf4da23afa4d99648b4839aafc836e9b624f7508de097d3bd682b5057159e5cde3bf4234f3d326d1a5326b211
-MISC metadata.xml 1244 BLAKE2B 7df9f6f260c038c4f6b02a9fe35b54dbdc165975373ece6fb27856893536b3af7218ca1ff487ba908caa8c9beea43dc3f503fc83b6cf685754b8f17e53d771a9 SHA512 121a82bab7f4126fe5afe4ad39bbc9e397483c485e8a5771129d8eff883e87248acb1d689d47a57bf792ea8e1e23e82dec9bde811dae44e9b86a6736944c3484
+MISC metadata.xml 1245 BLAKE2B 0a86a421bb4aea84ab3d6a5fc024cb5733f6b7cfc0664f0745b34c4dd61acf3287c56c966d529d0c5e8a1ada109cd037a61a92ff023d0fbd2d039f807b938b44 SHA512 ac8daf258641066cf4dda3bfc20830e747dfe0ab797639b3d9d2e79b5d4c81adadd136c2ef955bfc5ffd26f34e3c1f3a0eb66321eca9d13a3763115134228b88
diff --git a/sci-chemistry/autodock_vina/metadata.xml b/sci-chemistry/autodock_vina/metadata.xml
index f363bab631fe..f603fd62c191 100644
--- a/sci-chemistry/autodock_vina/metadata.xml
+++ b/sci-chemistry/autodock_vina/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/avogadro2/Manifest b/sci-chemistry/avogadro2/Manifest
index 8026a4a2d5f4..86f6632f51a3 100644
--- a/sci-chemistry/avogadro2/Manifest
+++ b/sci-chemistry/avogadro2/Manifest
@@ -1,3 +1,3 @@
DIST avogadro2-1.93.0.tar.gz 2905461 BLAKE2B db51e4574fdf2a31657b8bef7b06eb0d563484deaae1a6d75649187d6f5fd7b02a99506cfb850e09792555d7c27d9937d0df0f7172fafc3ddcbccaa7502c5bb6 SHA512 8e4e15b6c2d1935f8c585c83761b28a6397bc1dc22cd5f66464d59dd25327b1cffec809af492586be4b56793448f94f9375c16e8a4c4969f7b8f2591049cc5fc
EBUILD avogadro2-1.93.0.ebuild 1225 BLAKE2B 7dd01683f6f875b7e66457c6debd02f40ba7860f44e1ac1744088496524074944356518ffcac04603b7b86b09f9172268d1f0b67d4afdcf78f0fc9faeaedca0a SHA512 726f46a48c7087a34eed8fe7ad6ce7a9f4b0bb001850a2915ad6a2b47c0e17d4a082cc10bc4317fa4fe64ba44bc8e132e55ae1a389745d2751fa7bd43602bce7
-MISC metadata.xml 513 BLAKE2B a8b5cff44b4c27be87ea699d76379063c1ccf26ce04ca2052a08a6a5042e915e24cce853300ecffe9594aa23e9c8370b658ce0bd9595e6b231bc3c6fd6e725a8 SHA512 96e91d4b1243015e2e225ef21d261b09d41d67edf52db85a3059ad7d543d4c592d2a7fdd3ed716c4d633446d13151f2e2fef84ea8bfe5a19fa9e9d8fb8132d9b
+MISC metadata.xml 514 BLAKE2B 0a88a4b92fef923690f6e9767c572875d86c8522936aff89354f4b08ee74fe7c2f49e1eba143c850753d8f2cb5a7e7dc063e9864e433b70068ef7edcd0163683 SHA512 e7729ed111cfade53f238b9b49067c55c1a229489dbc1665d428ba8643c0f9ad0af402e8bf4c81399df1d1a786c7831a7a769bf9a5608157642546a1d0f45ee9
diff --git a/sci-chemistry/avogadro2/metadata.xml b/sci-chemistry/avogadro2/metadata.xml
index 8da47dd4e3c3..b669d7480d2e 100644
--- a/sci-chemistry/avogadro2/metadata.xml
+++ b/sci-chemistry/avogadro2/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/bodr/Manifest b/sci-chemistry/bodr/Manifest
index 2846d415c78a..06f56cf28af2 100644
--- a/sci-chemistry/bodr/Manifest
+++ b/sci-chemistry/bodr/Manifest
@@ -1,3 +1,3 @@
DIST bodr-10.tar.bz2 225671 BLAKE2B cda3d66da530cb28898389080807c4ed8602bb8871ee9e9ff75ba4a7a40ee676308539adb26d61b3361b53f37c099fa784438def9b768828a941c3693c7315a2 SHA512 a3e0e7195914938d8824127aa4777c4054c302ef7811d82d1e012d9be5d7a13d7f2225d4216f4a30ae7dbf70eb3b0b38571c3ee0dbe1d97af15f04171dd51bec
EBUILD bodr-10.ebuild 456 BLAKE2B 9d151b5ce46752ae361a21f1224b9fde5fe872e8bd18141fbbe5f94c2b17923fdbcd86a03e37303c9590c1c2cb77f0d6cf24b6d2cddff7102d92eda65c73d7e6 SHA512 88c69197d354522717c6d176c8b5c0b2572b40517332a42ae7969f17a2e0b440328383777230080b7347d078722eef17fbeb0c5237322beae930d9063b7f4642
-MISC metadata.xml 691 BLAKE2B 1cb2f68315ca1fc3ee1576ea5f13ffbac8ac3552090eac4ed36b85a7411e5d456da29f38627b1c36552d37e9a260a36ae62bd314b3b735c505931f2f9302c899 SHA512 40092a5f0956a1fb3ab8fcad065fbb3d3549d97c5687acf26fe68f07754ff4909b7c6bc84dcb2e097ab5637fecd11f7057026967fd86b4302a5a6f718cea3e1c
+MISC metadata.xml 692 BLAKE2B c3f24ba4b6efeb3c6d636045119465aa4e43a380107d4a60001c9f83bffacc7e96d35c09c974ccf48239585c9d01b5833aba68fa72dec391ab8ab29952d4befb SHA512 dc439813da41fd7562c9ed1c691ed3f59ec2e4ca276cb62bcd33b5a69370362e1f36286f8f0bafb7262c7eb1af5e80fc6c2c740b2be8e4d4a2993bba68ee5136
diff --git a/sci-chemistry/bodr/metadata.xml b/sci-chemistry/bodr/metadata.xml
index c4fa86e29eba..05ed327d6fa9 100644
--- a/sci-chemistry/bodr/metadata.xml
+++ b/sci-chemistry/bodr/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/cara-bin/Manifest b/sci-chemistry/cara-bin/Manifest
index 108b408b7757..134632735268 100644
--- a/sci-chemistry/cara-bin/Manifest
+++ b/sci-chemistry/cara-bin/Manifest
@@ -1,4 +1,4 @@
DIST Start1.2.cara.xz 43124 BLAKE2B 5c045662e156eda4c1a2075c52f1d35ad073a1bdef2655297f1df91dd3cd21a3eec5ff389bdd8765a1df2e9016cc09a1547db676de39c6233fd1eac82286cdda SHA512 26874d634491558dc593a0ec32e83d5cfceedc69bbf901f4d25d6b9515b84aebffbf495d1ac34b3664b8b5822954edf62c5b88dcca6bcfcb152715caa88f5f03
DIST cara_1.8.4_linux.gz 6677463 BLAKE2B 3f67df10698b3f2851de1b221eeab94b497fb8a041fc6875755e18e06ae2e8c9c3cd670d99e21bf8034d5e3ac0a5d2ab46e101ba65813004809e1a1975e3b29e SHA512 e264cfbef640f267132dfd48b940203a319c8f34de71c5b786c6bfc2ab561bdf3fbd79516d619ca52b2aca64a2887f770fabfabedb76433c5f78aa02c65f898f
EBUILD cara-bin-1.8.4-r2.ebuild 1160 BLAKE2B 20119fa5761bb4ae633d9b99ebf010c58d611d1fdd293004eb67146795a5a19241d99ca474652ad5c00057da20baa954939442dfbddd9e95119845f7cc63b818 SHA512 b52a3e1dc1b09200be79a314e797b5a3a7699235c407c4463f9bbdfa47108ae1be7219ddd45afa69b151e5dbc07141fd9cf2bcb32f5f25f6e627c877e9de8960
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/cara-bin/metadata.xml b/sci-chemistry/cara-bin/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/cara-bin/metadata.xml
+++ b/sci-chemistry/cara-bin/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/chemex/Manifest b/sci-chemistry/chemex/Manifest
index 13f44be756df..4b31f32b5258 100644
--- a/sci-chemistry/chemex/Manifest
+++ b/sci-chemistry/chemex/Manifest
@@ -1,3 +1,3 @@
DIST chemex-2018.10.3.tar.gz 546696 BLAKE2B d283cfb94118686f1974780249641e0ea6f86cdb854c4a256897e361a300a94506813a5035ee2f300fca13263e8452b77e7a0817436cbd620ba16d801a541af7 SHA512 784bd03b354724d6aa52d663c6f661f865d4ef7ca345573bc8aae9ef63e5dbb3e65abba364de3ff441b78adfa588344c718809c5880b3fc70d8ed24be06a0826
EBUILD chemex-2018.10.3.ebuild 1007 BLAKE2B 9b231e246e6401185db827f7cc808be6c1955a569f00b156b7b3ef43645cb51596865551df05c176bfa916128dd40953d933a54e7c10548c37fb08acbb8fb62c SHA512 82f4719818573b63cbdc8d7ffac0968204357f705655e327df0866ea6296c03fb38b8b05133b301fb88fdbaec693814c55c6fea935f7dc4a507eeee5fe0493f3
-MISC metadata.xml 216 BLAKE2B 0fbfa16661345362ff89f87adc0bb42fc5f5c9145cdedb36f3f537b39af4023b91c4dfb0d8e83a4f9ac963141f594ba8ae678371c338d992a96e02c11fd84195 SHA512 628a69805356b7458edaa2297901224178b016477a937f77e692a78ce3e7a0b6d2d7b4c4b7e70d0185d7112e6a59a5131e07d8c950e90b9c8722471d7511afc6
+MISC metadata.xml 217 BLAKE2B f8189b02494f180dac078dcd5c275d3c795f20f360f8b172c66065a2d937e396b24b8631bba4cd8567d60285ce89fc77b9539f2233bf33899c820613c48c33ba SHA512 f0c9e5b3d281fecd21b1e23a6f44c94c1c0b3220de46a177d35932111b7f1ab4399061c42833ac1ee9bd0324b139fc8db66e0d2890224d607bd3be38ae469be9
diff --git a/sci-chemistry/chemex/metadata.xml b/sci-chemistry/chemex/metadata.xml
index 020b40648ee8..572c7daf2ccf 100644
--- a/sci-chemistry/chemex/metadata.xml
+++ b/sci-chemistry/chemex/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>pacho@gentoo.org</email>
diff --git a/sci-chemistry/chemical-mime-data/Manifest b/sci-chemistry/chemical-mime-data/Manifest
index cc1d83445357..0a935b14c466 100644
--- a/sci-chemistry/chemical-mime-data/Manifest
+++ b/sci-chemistry/chemical-mime-data/Manifest
@@ -5,4 +5,4 @@ AUX chemical-mime-data-0.1.94-rsvg-convert-r2.patch 1305 BLAKE2B 22809dbd6c769a0
AUX chemical-mime-data-0.1.94-turbomole.patch 2451 BLAKE2B 86b4b08b2af4503e0f8a525ebaa4231a3d0d3727c951b9e957c9fdac790bc41b7f01092350099a64cce66dbb61bc4cbd3654ef91834310c6c7cd1dc156ca87e8 SHA512 1bfa8818d159f0f917a24a06b0bfe926f0854f4242d8c2dbbedcd4210ffd38a459298862dc1d1aedbbe648a933db99c5d647c5409af74f88b03dd3033946df54
DIST chemical-mime-data-0.1.94.tar.bz2 146077 BLAKE2B 9996c240446dc9571b6b4afbcdc6cf16a08e11314da9f785490b1b20933b6d18a333132492e30315c08f4441c048ec593a111815253050cfb5ab562aadb784f1 SHA512 7f3d967149f27ab1de53c948dc055959e661e1be9d778e3d56d06bea95769da7770ab5fb66afab6607747ef91ffb1dbbcf921e5f06e3303351781968594b5f00
EBUILD chemical-mime-data-0.1.94-r4.ebuild 1091 BLAKE2B 2014dc00aed88c563263444a32fa008b440413ddacca3a8e08a9f07191a0595f5166715e12f31c5454b32fe0561476b4b4400aeee6e7a99c9d791f923bd8b4fa SHA512 6760106eb5303b951b3a245de3da8356cf73a7bc6ba788554b308fd31c004ff18729e7c223264df011ac2a3493e201525e394b4f2a63bc4e7fbade9f0056663f
-MISC metadata.xml 358 BLAKE2B 0797b69d8086372b01c949a083d0aff8099d5741a89026e0a207c955d4869a2c518bc840df6363b91f17026f02231b95b509da5cdff53044bc2220742214c918 SHA512 72f35d647b350ba988e253eb7c44b2bd9f4b2255df59126f4f8f1b6fd8829bdd078072e48423e5007a0ffff4a2de34ab2aa5d1a94c9e121d3a291598ffc617f6
+MISC metadata.xml 359 BLAKE2B 21813389835e947fa641360371020e74592c4b3b54b9244f6a2c3e5022abeaf477d42b466ce041478626b035f4ea243a526ed1ce796a995482d8bce66a3c3105 SHA512 bea4afc5ec2f3d8ee195bf336c5f81a18690bd9fde14da425dcb3b123d9fec362106a13efe11121a42115209b4c6670a7f24bc4aff6a170f496a9f3cbb764bc6
diff --git a/sci-chemistry/chemical-mime-data/metadata.xml b/sci-chemistry/chemical-mime-data/metadata.xml
index a11dac390182..702a57465bce 100644
--- a/sci-chemistry/chemical-mime-data/metadata.xml
+++ b/sci-chemistry/chemical-mime-data/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/chemtool/Manifest b/sci-chemistry/chemtool/Manifest
index abaf7e287ad2..df82f7f2ef8e 100644
--- a/sci-chemistry/chemtool/Manifest
+++ b/sci-chemistry/chemtool/Manifest
@@ -3,4 +3,4 @@ AUX chemtool-1.6.14-fno-common.patch 685 BLAKE2B dacb9935c915d1858d828ccbc3c7c6c
AUX chemtool-1.6.14-no-underlinking.patch 2251 BLAKE2B b12f78d61891b877ce64111f404d6490b086baf169b43d1b41cbb2efd4a99c2b8d7bd20199b0ca82fea6695e9e09081a8ad000f478c8aa96e5543c8e92e7a57f SHA512 42d623e2875118350a3c4a1979483ccd1de535f8a6ceec7fb9554661a8f91c3403d2cfc207891ac1f71ae7fda4486e48c74bc6621dc76eb2740a7c5f68caaeb9
DIST chemtool-1.6.14.tar.gz 817735 BLAKE2B 065c5069402b5960fc2c9b686a9c0e9954b98c43a1d70385ca56e8407fffbe09fd87023f1f7177140745987c69731766f64a8b8015370ef38593bbcd3f073e64 SHA512 066c83c61aced3134b081767e788143a047889a2fee4b6535c2b0a3166bccc73d75981e1cf35b7bcaa5b8fe2e0227b28693b659decd82f7783cb4082ac6ed2bd
EBUILD chemtool-1.6.14.ebuild 1191 BLAKE2B 0be0de974463132ce63148062cc0a771c17eec4de6125c2039c786fd86975dcd0615186b42c3b6f5a6785f2b8a84269c89c9ad70fd705bbfea5a85b6ffda1da5 SHA512 07ac2328bcb1810bc103ff4f3381e043720e6eef57cdb73f2eb4b62770570d769d4650f5f58e78fea748e571c5ab58303435f39ba7fcdba94b88e5b7b1a3b3eb
-MISC metadata.xml 335 BLAKE2B e8a970d66f40b47ae6b3bcdc54fc6435a08428ccd1675aecaa91e0935d13c887fb91a97e82cd48d57b8867ccbbfe1087d562a5c80106c7bd2c3f92793694b35e SHA512 b02a3fd1101bd4ffb01ffd327b307f802fdb126492eea9dd98b86a87a367e669ba5ed4d94d5fecc4528c94abfd90d41e6215c91a34a64b95d0a2e7c2060a76b7
+MISC metadata.xml 336 BLAKE2B 227ec6f8022c7f8d370e7ef00a3074f705a187cca822c100a13c05aa33888d2628a5c78e8cbe79229e992a31ff8c288f59279a21170899ab1c291d65f55f4734 SHA512 fda2f0f92af46b00a52f1185823a332ac62b19131d14d8c45a75a4d38c675807ec5288625ed307abc169484f8a1acd4e6a93d9871cb7a51dff8e93e9a44769d2
diff --git a/sci-chemistry/chemtool/metadata.xml b/sci-chemistry/chemtool/metadata.xml
index 8b1591478bcf..8847960e68ca 100644
--- a/sci-chemistry/chemtool/metadata.xml
+++ b/sci-chemistry/chemtool/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/clashlist/Manifest b/sci-chemistry/clashlist/Manifest
index e02c80211ba7..e80520a70c48 100644
--- a/sci-chemistry/clashlist/Manifest
+++ b/sci-chemistry/clashlist/Manifest
@@ -1,3 +1,3 @@
DIST molprobity-3.17.tgz 26429898 BLAKE2B f2ed8f71c4f71c19aac6278eed40cba0db53e88dc1be7ccb6e3e831d4202456822efe93ded2cc8ca3226efb9ef10999895b191e8b5d5188d577b78c9fa5a8c66 SHA512 a6e986f285ff7e8d167e2d1c935a55b080446c9809d352c95e2ffa32265892b59cd1611730e75ca88aa28387495d3ebd84226e1a9cdd33f0b27b1a8a1b6a469f
EBUILD clashlist-3.17-r1.ebuild 650 BLAKE2B 157db4a2b157a5da8046925420e7b1f0ed5e2dbc3fae07df137e676dadfb89d0710229e4562fca87a97348ba002a5daed25f435f246d03aeab267eebaf1b905e SHA512 96c83e6ea78acec35cb235722600f2bdbf3492e4b99f3dff9582ea05fe92fcc981ce0669bd729d1dd97f0d891a3a12f92d46b05f3b6274f835568d4af6d15a33
-MISC metadata.xml 723 BLAKE2B 80e17900042e416acc6a990161dcfa3b968e5331cd96945c8a12bb516de7b486fe2fc9fd3b6cbf72f818ef9cf34853a01fadf843161dd2bb02fe796eb1f30586 SHA512 7da0ab5c03d802eac05b84e5f47fecdaf990ace2789f0f88c69e730155c9a9637ce23d5ede6633c6e6f7cf9c2cdf3e7b7c82de169caa291bd8facab327577e16
+MISC metadata.xml 724 BLAKE2B 61f63b6348ac629909a025bddeb3fc5c99c353a316c343a90abb156372f37faf071f691ebb25b139739d8de5c920e1452fd5598106adb291e500038d4aa2f1a4 SHA512 d1890637c3873832aa55e249a76f25ae328a4d4980c17c6fc8405e6440f3a6d45e808d5eea2487684a99e082df1e5918efc6274b4443b7de000aff6843076d8d
diff --git a/sci-chemistry/clashlist/metadata.xml b/sci-chemistry/clashlist/metadata.xml
index a2df83cc0e8b..b9fcbfc541cd 100644
--- a/sci-chemistry/clashlist/metadata.xml
+++ b/sci-chemistry/clashlist/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/cluster/Manifest b/sci-chemistry/cluster/Manifest
index 9ac28a3886c7..d640d1a734fd 100644
--- a/sci-chemistry/cluster/Manifest
+++ b/sci-chemistry/cluster/Manifest
@@ -2,4 +2,4 @@ AUX 1.3.081231-includes.patch 245 BLAKE2B 6bbe0621d49bc7af8091a5594ebcd52d29d99c
AUX 1.3.081231-ldflags.patch 842 BLAKE2B 67085c3dd9ca5e97b28481fbf06a0f9b6294bd519eb3639c54b10cd9b11a4c44a48dbfa907cdf9ff8ec68761164e82d415c44ad0c3a551842416759c76d4b7a9 SHA512 9937f88e65ae94595ba2889e7f57d3b295e025d2ebd83817300a7f74a674fab84358e3b7fc9619ba473c586c51bd106e303b096cdb267d8fda05670f7815e9e4
DIST cluster.1.3.081231.src.tgz 8860 BLAKE2B 4bfc6fe9efa3dbde106ad12df7b23990a748fee5446f16fe4e3cf9232697313bd513366a2283ac732cf0c7306ac65af578155328d0b04e4b5b99536553c9b903 SHA512 af5851ef467458d45ee5f2309c6344ae16145ac371a1b9d0a3d8b5769a18b98877cf7cb65b85f71108d927b0e6c363e06b85a67e7cb2e5e0b41af375cb2db7ac
EBUILD cluster-1.3.081231-r1.ebuild 661 BLAKE2B 2c4054b677172ab3d6dd2e6decae4841e20ac1596d2a92b2bbd5ee633b4934db454fd8e21bd5dc71269224037eee673327b0a95433c19c7e3a0d699e38b15e92 SHA512 81883b09e3159cc2ee01756e4809265723ce9176c78de7fa0dc3c56477c25dcc45b73161268bd9972d881bfb008d9c9df406abe12fe347415a8ec5ecc60edc20
-MISC metadata.xml 661 BLAKE2B 602330745970373b72472999d013a804a343da0ea3c2a1ef948d3fea97dfbb1f1533a0322d1b8295a19ea377725d503c36f37316f5168ea815053afde8388b50 SHA512 449c8965bd2f3039effcf1d6fc15fea1708cf5987aee36a4b8c470f85b59f7b04884a796a353f17fd890aa9d2e4ee7b1c25ed969febabaa54e577f8be31ed889
+MISC metadata.xml 662 BLAKE2B 66db8e72eb84b709acc99788eaa9be84f4427db7cafb71acafae25f7bfe4dc42e54a9249d2adb58c35c2a0a815012e6fcb131de953791a9b8465b038da1e3836 SHA512 139bb6061d66da9e10c479d02c0df1df6f296d423dfc0db33c8eb76706888a8eccab587fe81269a3d90020425953c5cbe32bf94ef0b3ad157dabe25446fd5df2
diff --git a/sci-chemistry/cluster/metadata.xml b/sci-chemistry/cluster/metadata.xml
index 62f5e4eb25ab..40e82f448b5d 100644
--- a/sci-chemistry/cluster/metadata.xml
+++ b/sci-chemistry/cluster/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest
index 12dbd946b77f..d07091f553d9 100644
--- a/sci-chemistry/dssp/Manifest
+++ b/sci-chemistry/dssp/Manifest
@@ -8,4 +8,4 @@ EBUILD dssp-2.2.1-r2.ebuild 962 BLAKE2B 4badf2ae8647aab9c5e359d9e0763d051388afe3
EBUILD dssp-2.2.1-r3.ebuild 882 BLAKE2B d95025d549b3114107e3e52292e6ae086141436c23bfcbfe3604c59c971fc360de84a621e3415d26a6b2faf5c51810e9e3e7441641af9967b38534178ace62a7 SHA512 29f0c7cf76f6029146668d08d992380147f698ae2bb00cee76777936217f27e329cfe25f41c58c07906b881d40385d134d51f34e14f80c0836c78cf50f1bf37a
EBUILD dssp-3.0.11.ebuild 825 BLAKE2B 020ea517127ffc1167cbff3a9362e5ff255b25664769ef2ac8f7f3060e34e0bec29e965df46e65bab8943cbf5fb11175d70b1b9f9e7d71bdbf92a4c54a903367 SHA512 b81dbe1cb9f7b66c5268485dc262bb705b12d250e2ec778c80fddbc584a38e36b64cb93e92385c178fdeca0e593c45ce25aef16480bfa9eb230bdd2b8a82fa53
EBUILD dssp-4.0.1_p20210831.ebuild 849 BLAKE2B 0d6089c63608b85c98f67136cfd275098272985f689ac0e6338c7ee6cd158a851901815d0dab988a2ab65ff63a1bfbcd689577daa98c2c91bc04c95f2a95420b SHA512 35d5e67754a7a7b3d3021c16d57d1b4e5c8a2316606b7ebed08bb543e647794d87b64e4ba04db3d86d34f13999e04af08b4df8cbe4d8d5843c1f3f26c491b0b0
-MISC metadata.xml 216 BLAKE2B 0fbfa16661345362ff89f87adc0bb42fc5f5c9145cdedb36f3f537b39af4023b91c4dfb0d8e83a4f9ac963141f594ba8ae678371c338d992a96e02c11fd84195 SHA512 628a69805356b7458edaa2297901224178b016477a937f77e692a78ce3e7a0b6d2d7b4c4b7e70d0185d7112e6a59a5131e07d8c950e90b9c8722471d7511afc6
+MISC metadata.xml 217 BLAKE2B f8189b02494f180dac078dcd5c275d3c795f20f360f8b172c66065a2d937e396b24b8631bba4cd8567d60285ce89fc77b9539f2233bf33899c820613c48c33ba SHA512 f0c9e5b3d281fecd21b1e23a6f44c94c1c0b3220de46a177d35932111b7f1ab4399061c42833ac1ee9bd0324b139fc8db66e0d2890224d607bd3be38ae469be9
diff --git a/sci-chemistry/dssp/metadata.xml b/sci-chemistry/dssp/metadata.xml
index 020b40648ee8..572c7daf2ccf 100644
--- a/sci-chemistry/dssp/metadata.xml
+++ b/sci-chemistry/dssp/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>pacho@gentoo.org</email>
diff --git a/sci-chemistry/easychem/Manifest b/sci-chemistry/easychem/Manifest
index 695a7f699cd8..ae5b2b37daea 100644
--- a/sci-chemistry/easychem/Manifest
+++ b/sci-chemistry/easychem/Manifest
@@ -1,4 +1,4 @@
AUX 0.6-gentoo.patch 1695 BLAKE2B cff09334811f4f7f40c77edcfd9c160885f906d616d1b36d0a0c61b0c4d03982ebab91cbcacd55fab1e7b152dec6de26e8f6584b8436a20a3d9e8f43621888e4 SHA512 02b9880ff2b8d9ec81ddd8d96f64a9e1dc38810789eedd18ad7cacc0c594914334971fccf735a7103878c8d32e0a3765d5ff57016b4a4feb2e572915bd7c3eec
DIST easychem-0.6.tar.gz 265458 BLAKE2B 673100e6d01653ea16a70a8384dc8c598c8e113e241851b19882b333c95e6118fc180a1123e770c021245417640310a05a9026e55a57ae589bde59cf9e5b4766 SHA512 83f877d1813287592a460f4dc3769feda88e45d8f77cd728c4055b60521babe253b4432033941ff429c753cfe675a642714052a01736534147398d6972e47051
EBUILD easychem-0.6-r1.ebuild 819 BLAKE2B 3d44383de6e9bb19e085d2db5e3382a02b1f03e3c67e4656bdcc94c0a768b3969bb8f488a7e2982cc945a97e454dc4de21743457655600241f2107ec01e83d8c SHA512 ed6793460232ffc5711ce05baea50916e0f3212aeb72322f52e39bdda2c3d0746f4b654affc98df633b3dd6de116b024c33083690055a4c6bfec34097d5bc4d0
-MISC metadata.xml 758 BLAKE2B e03f2d584016eb1bf52a93b6bbcf0d77734e50ee7e1ab4fb15cfd15032bb28437d994698e9f221dec7dbe88ca7f3234734ec5819ffce8e103a03ca639984ee8e SHA512 e07eda8ec2fd7a721628cf0ccc1a50876f6cd8aff0a27903366ca03587d8c9dbb5cd830da9dfcfe2aa5d6b64eb577b36f3b5173b5fa6e39b19c6e97d8764a825
+MISC metadata.xml 759 BLAKE2B 8354c9d05f12cb927a6cf28d1c8a0744c672e33ed1675ca6443980c9e096359e5f5dc5b7e69e61a0fc82c172ff7dc74b86e1274734f9f2ff028d3264ca42b13c SHA512 2a20289c20dd606b84625814599492aecb89dedda57c7c43f58f88f6f4c9ec5cabb2ae18401a4aa5ec1a78c741b68300428b14b2f90b1d1659667148984a0822
diff --git a/sci-chemistry/easychem/metadata.xml b/sci-chemistry/easychem/metadata.xml
index 6eea2dfe1793..7451327b470e 100644
--- a/sci-chemistry/easychem/metadata.xml
+++ b/sci-chemistry/easychem/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/elem/Manifest b/sci-chemistry/elem/Manifest
index 82c69422b596..236bf2c8249a 100644
--- a/sci-chemistry/elem/Manifest
+++ b/sci-chemistry/elem/Manifest
@@ -3,4 +3,4 @@ AUX elem-1.0.3-fno-common.patch 496 BLAKE2B 90d5f78f7e1efcc9f195e432ab1f942f3000
AUX elem-1.0.3-missing-stdlib.patch 133 BLAKE2B 2ab00632e93401db578910b4e44e8f0ad4e899fb3afce5b9d1b6612ba181fd0fc3922c8cc229404164bdef562850337f006cce4047e52b2e459954419bc05529 SHA512 769c5e19928ed64b5595cd37f16d4df893889c3c0ea7e6673e182646bcaca89a6e46e7c6611c586c9213a417c439de043c0beb84a9543e478f78e4d9843a1c3e
DIST elem-src-1.0.3-Linux.tgz 58364 BLAKE2B bdedb844ca62f928fdae5b01b13b88e5f43f5e37f40b47f7b8b9b1a2cb11053b9aefa7b1b4bb78a8632f3329f37afeadfc34eddee1b9f7cd109bee89aa9cdf32 SHA512 24b163c5cc3019c1beb677ce7b432b21289352f7cdbad686ab9161c628d3aadbb90d8abf9bef49f1c7d077b706bbd4ea6b381f356cc85adf907f3c15a4f4893c
EBUILD elem-1.0.3-r2.ebuild 689 BLAKE2B 464dcb25ef4869d8def5c3b1444e586d56f30f9e9d84c8f8828a59f38a4f83e69983503be514724210d72c19ea88ba33d4f16f1517dccd724ee4e4e431da7f2b SHA512 0cc0d5b86907beb5de0317a58424d0ec2e230f59335bd80bf9b4329cef2fa742c44aec0e2524aeaacfc89d29643dd2be42e3250e8ad7bfefccb432dfef1d3386
-MISC metadata.xml 339 BLAKE2B 73c4ef3e56cdf6f1061537c5c3a3932b7c38af40ec483cb4f12c21722a65dbeb0ce2dc162911a96a8f4147150a232eb398e2a4fecf7bde60ba2738994dc7a534 SHA512 daecddff7728e2a0b00d5e16bb4fc1c88bd316783f8921705dc76b41f427a8918ead92e663fa202ff57508242daa454cae2c04057c8bf9cf767b95d59e43c177
+MISC metadata.xml 340 BLAKE2B 1a764f9dff176031a6f20610e9fa4aa6cc706f1c2cd76c52c529f50254cc70b94c76dac3254a21f15a3af3965f4ac6bb2266f5dcb11161a00914ba1247d6c36e SHA512 a50dba6ad1704bb2c9cc4f7d8eddd2e23e5b315327bd70087830d7ce3d7d26758799be3f26421d5a60193d97ee81987827f8d5b97207d485dac5878c3aea4217
diff --git a/sci-chemistry/elem/metadata.xml b/sci-chemistry/elem/metadata.xml
index ca4cdc816a9f..762d19498c85 100644
--- a/sci-chemistry/elem/metadata.xml
+++ b/sci-chemistry/elem/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/gelemental/Manifest b/sci-chemistry/gelemental/Manifest
index 7986db0feccd..a558c8c39877 100644
--- a/sci-chemistry/gelemental/Manifest
+++ b/sci-chemistry/gelemental/Manifest
@@ -1,3 +1,3 @@
DIST gelemental-2.0.0.tar.gz 779052 BLAKE2B 86f98a97acaf84c2bd6e03e991e226f19e65ed9c06fc43c809278d5e6d8b93645aa64ac4983166fad6b6b9b3d0ad5bba7a7cbfe2dccbbe2ea093deaaa8bdfabd SHA512 86b0f59a3508560e3882f40b820d7b24b780bb4d1619df94f3410b0832255deec8e55d11c5ad960f96fc3e16d8a624279bf53bf178bf1dacdfe80a72181e48d6
EBUILD gelemental-2.0.0-r1.ebuild 818 BLAKE2B 85091e4b1bd360cf0c86790ace65e6f0a289bc21d76ac174802aac13127886d34bec680958b377107fb1a324b75c312b551cd01ce3fb26e471cebfca3e3b3993 SHA512 fb33c8b0fcdc207f42432857c79aeceebf6c4a52c53dbb29eccf27866003cebd88a75a00df89376901b6c49621908b673546c6cfb3a190f5cce9fcc1d99f9b08
-MISC metadata.xml 455 BLAKE2B 7db9d6b4a8896df6385ae2c8c2b8c771c1a6ae82a1072f6d3f9b27fbd7c4d0f3546a03ced3350331d25f48e5631855fc9653a808d49631803f2d526db75b3ac7 SHA512 815bcad86f574f7cb2dfef3205e2a6398f5fd2512395c0c016733d4cb001f70c0003f494a69bc9bc66d675a9eaa89c203ace13f17f4a9f2c6805a34fcf5125d8
+MISC metadata.xml 456 BLAKE2B 7939d6a87c0289b785df4559be9346e7c5a05d53fded5e0ea865895beb13562620c2c85a4bee23bb4dc4dff09ad4066a05c674a761010d135b435e8fa3e572fe SHA512 df24e4b2099bf9d9f91f04b00b90002ed9101fd54798773e931b7464eef7871199fd7dd5e381a5e42fc2a67cf5f692549be5df862afc4930827d246f43e31694
diff --git a/sci-chemistry/gelemental/metadata.xml b/sci-chemistry/gelemental/metadata.xml
index 091878c90ab5..a4a8fa434cf7 100644
--- a/sci-chemistry/gelemental/metadata.xml
+++ b/sci-chemistry/gelemental/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>tamiko@gentoo.org</email>
diff --git a/sci-chemistry/gnome-chemistry-utils/Manifest b/sci-chemistry/gnome-chemistry-utils/Manifest
index cff0d80996b8..b3fba415d489 100644
--- a/sci-chemistry/gnome-chemistry-utils/Manifest
+++ b/sci-chemistry/gnome-chemistry-utils/Manifest
@@ -1,4 +1,4 @@
DIST gnome-chemistry-utils-0.14.17.tar.xz 5911248 BLAKE2B 5d3bb4afbe3d3f620912e810717f08674d56a11c384b1fb239788cfbbb625797e8c52de2b6d940ae7f3d83847533afedd6ed961b1fa0ea1cec62dda88de1a6df SHA512 01bb964e1484e028c5965f1de74798422b448823047fcadf668dc76e98b3e214939a2f031d0182c717c4376f490e5969a4604ee66d1763e6b480032d7ae97468
DIST gnome-chemistry-utils_0.14.17-6.debian.tar.xz 68528 BLAKE2B 2e4d318a5b91ca7963829c40c5d732a0ffa7fd9f4a32a6727f4926d2d4ec57989f50bd6839da49b4fa71dc533830bd0926205e952f08d04c08320e76ab51914c SHA512 8c6fad95c5d5e0895666fb9fb880364a9e3ab89761893b812c2cf835265acb40abe6b40def0960e1b38a0eea441310a3c1af608a2bcea37d5558533c9151e309
EBUILD gnome-chemistry-utils-0.14.17_p6.ebuild 1669 BLAKE2B 319dedd70e4c2bb4bceea014e8f300e44bf6bde9b112acb375d8d438b3584da646247b405e854bc5134a14cf328d621f77d91bf0c20c8245b41ec18df37d39b0 SHA512 86b78111a15981c72ad9627c3d61d4d2defe3771bd73d728c15d8fb36d5509a79b424b7c49ab53eafdcc27a0fcc80b48f79d067400b65969ea67ac3d4070efa5
-MISC metadata.xml 336 BLAKE2B 3a1270d31b630b57fc2fc272992b191bba7106355dd176c8fc8ebfe2a92f3aae68284448df2dc43682c6663d8e087320c979d2539a3d10ae5706be2e5b8c35e7 SHA512 eddb0149bf60d2149ab99cd49486c9252815787cb6b1c41e1cd11ea2897df619d4186e6f84cda414f977f8877b7d23ce92b92fcee5918de8b3441fdebe834bb8
+MISC metadata.xml 337 BLAKE2B f6895ff4b84e03d81d69b69efe05fc3bf246153e09afa56323c853c7b9b8e775d25173d24c82e2f2e66f5db42430c433e82940d91d47a99b51679af13b0d17ae SHA512 8a22e6a36ad43faeb635a12d977eed127f30f977915bfed2379b2187d33e05f2bbbc937977e168b47af5adb3fe26f964439d5d16e7a44dcd7f12faf7b84e60b1
diff --git a/sci-chemistry/gnome-chemistry-utils/metadata.xml b/sci-chemistry/gnome-chemistry-utils/metadata.xml
index 0d27f618fe33..fcf8bc4bad08 100644
--- a/sci-chemistry/gnome-chemistry-utils/metadata.xml
+++ b/sci-chemistry/gnome-chemistry-utils/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>pacho@gentoo.org</email>
diff --git a/sci-chemistry/gperiodic/Manifest b/sci-chemistry/gperiodic/Manifest
index 8f6e9217df37..eabb6410c42a 100644
--- a/sci-chemistry/gperiodic/Manifest
+++ b/sci-chemistry/gperiodic/Manifest
@@ -1,3 +1,3 @@
DIST gperiodic-3.0.3.tar.gz 451559 BLAKE2B b91995046b9905a534e3b6f530aee0ad2b4e6ac42cd11755ea182fdaaf8970f34b1aea8a33870abb8767837606a42a0cf0d76c9a689236aa39fba686e1521ee8 SHA512 7226063cf7977f4283a199d4a3d1842d6c9be60c53f5a005541eb26f35cd6538b29f086dc13c28225779e1849a12d1c39150897055c03902cb00adc011bc1ce8
EBUILD gperiodic-3.0.3.ebuild 881 BLAKE2B 7413f3d080b148fd09ae289e4032475eb73470ae6822710f854781bb01f9dbe21e53a9d11828894468c7b14581998f43ff28809da12faf273988e0418f2280cf SHA512 7a9dfb58b2c2be95fcc72d37a6585bd4bd244721751b545ef07ef276b0fddba88e6c19ee06d726ca5d3c45dbb70cba12d39b4948c9a9ad149859b690fb97d3c7
-MISC metadata.xml 550 BLAKE2B eeb2153919fb1045284131b22a26e22feb0c4671296ed2ba223b0d5f8632d5e73070ef9bf8fbff52c228ad3c9eae23a701b5d3f15e0fb11c5cb0fc148297c1bd SHA512 a847a617e38f540ac53851c97bb30bb3b64d7ca3dac8a89b9a1e70521081cb8e2ee0183c9f9fdfd099532add7dd017cbff53d3b67c7624adc4264953b646e2e4
+MISC metadata.xml 551 BLAKE2B 820a6c68db9ca1c8e1138fcd82aa998c5e9a06a93ec19e2c7135d522b18b5410597ca1074b594ccaac896fdf69efa1a962328022b78c7c3d12f04a9b32a2d977 SHA512 8e3c92beae849c975057babf305a21df19f42d07bc122db73023ec3cb7a52937906cd2dcde9e9bd29f9b4f54b80ad23c907840e38bfdaf608e9b12373c47a7cb
diff --git a/sci-chemistry/gperiodic/metadata.xml b/sci-chemistry/gperiodic/metadata.xml
index 9220d57f13e7..3050b77faba5 100644
--- a/sci-chemistry/gperiodic/metadata.xml
+++ b/sci-chemistry/gperiodic/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest
index 7a70ba0f3780..aafd837a6016 100644
--- a/sci-chemistry/gromacs/Manifest
+++ b/sci-chemistry/gromacs/Manifest
@@ -5,21 +5,25 @@ DIST gromacs-2019.6.tar.gz 33446147 BLAKE2B adc21fb6b841b06d499607f8c0166a673645
DIST gromacs-2020.4.tar.gz 29149899 BLAKE2B a07c8efd96137d58c1edf4ac9b5aafeb16d9e65234b9459b71471827032654acacb58ed6ae87ec6e0e593a0acd799683cc4461b06cc883b089d740708619345e SHA512 0c56f058741af70660baf0177724ec940dd984c05ea141ede91ee51ce3744f76d00e31bdb5db907e46fa1639de5dca637b3ace26e89f908c2e74c69f0c21ed3a
DIST gromacs-2020.6.tar.gz 29196621 BLAKE2B b350fc62fd8eeb3f2b042fa74a4ed42e43a7b74efd8fddb60ec086a814048a52b8625da65fa5c4cf2cb1e22f8347562bc84d38bf34441fc5ebc6abaa38b0eea0 SHA512 4ce4d6b9ae33e9cd2a1ad3313e80acf63ded21dac897b01dbf87df2e318181796ef64c8a1d3e0a6058b972d8d88d00f710cd0277db12f38fc2c9b29772c98bea
DIST gromacs-2021.2.tar.gz 37976386 BLAKE2B 8818321bbcbdee25356bbf909d9c667f9d7cf180e696a323a61017683234d1269decc8f8d72b8012a8cc207f69e5cd97e2ab48dbbff06d82bbb407bc0578854b SHA512 51b1728f41932274436ab807d569109e2b0e145abcb5cf9c9b7daf6a7396f2f8716dc28fb93cf178c97a7eaeab2a88878d0bc71dd6c6abe7e829d579e7968615
+DIST gromacs-2021.3.tar.gz 37987972 BLAKE2B d71995c7d5a34978246e33dc637ac3d273e547afcf72d1a107026650f03286ecdf27e4b9a70113b3c3a01af59ad49ac5c813aa6e5d2e8eb29fd05582a7a28d34 SHA512 da420917d06de2e192dfbb4e1b9f46989ed05b5c7e641c657104ed8f2bd8b22509bffd1ecfd7c965c80544eafa6af12d6d0aba7e1e7d9d14a4a88fb3fbf394a5
DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5
DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb
DIST manual-2020.4.pdf 11851608 BLAKE2B 7b7bdf08e8946fcc448543b08391b94a67fee60a8c810597c1f09f70443f9d7db817c99622dd0c21c6317f5fdcd6c4a88589ecac57055cb0cd8597d6021026e7 SHA512 928555663c77de36393e625c29d388d4e1c8c1298e7a993d871839e0d4d8d18d190221ad8f1d975bd072bdd6a061e9ea5b9295f2ecf45f24b6523ea5ea290fed
DIST manual-2020.6.pdf 11850850 BLAKE2B 155e4eb9c200dcd0a38e3669b26077fcf310d437b82d9a593d333dada3989c2c8a936d62c642e195f98bb474b1673b8142405c467348fc96a74d57fb12106d76 SHA512 be508ebec597b82a2c4056029f8bb731b22cb8902628a45462ed21af54c554d28e07d5381efaaa96565202b7b47d33aea67950206cd9e8936211ae721b21b3e1
DIST manual-2021.2.pdf 12252501 BLAKE2B 0dbf9024e1516076b0eeb46e41523b966d1d81f57504fe0501c7bc8575e74fb19e3452ac584757e425bcccbc737367fe83be87fd21a4287f4675cf87184b960b SHA512 14156d3b1017990e0be3ceb7ec055777a1aec4c347ac2e821a042d51c931f84ebca862f60644a90ed7ba4070cb14ff8babcde3e4351e4dbec84df8563e350984
+DIST manual-2021.3.pdf 12255076 BLAKE2B 6ca516b6832507c9d4100679d1f9bc9e3ab17d226849b050764b0d0626247dc57ce49985f9a7fc0061f3df278923a83faa367ca8ab91c37e5624dc584a51a822 SHA512 5d53798f30ea00fcb4e1b35f7eaa4bebfc05dafa4f2d0c197dcf2b57a624ad3a98b74fd90722e40d0ac13a6fff4ca231f9d6340f52ba94659c827c53c2f1cb16
DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda634904836bb
DIST regressiontests-2019.6.tar.gz 67643195 BLAKE2B 1e054e24b187946f7ea28090d4f20cf8e1d79a26253f57ba07d130e0773d8541b8a1552a38023d31a68ce8bc62d8e0af1d98609234bb3e7d3e6d567307ebb386 SHA512 eacf1c55b982515a305c29459fe80a7cd558a8481e5689962aa956148af542568b1d1ce59c6784ecb0afd4768c2b664afa21e12af2d89ae2b06b1ba61ad72036
DIST regressiontests-2020.4.tar.gz 48542144 BLAKE2B 1dcde67525d40ababa74d9e8ba2dd3fdef1de7d1018491e102edd71d3a622925f213b5a0812e5448882b4cb5fb578317e8e5029bdc4bd53008aa8441a3d9dea1 SHA512 7c71f36a1cef22562f14dcd233e90ad2fe370ae1a7d3b5268727259b374e12d4754253735ac8745d3738bdbc1cc2067780fda5e393be2ff264f632fe4e0c1978
DIST regressiontests-2020.6.tar.gz 48541232 BLAKE2B dbb405bd9168775984de8c9fb9e3fa2398d2790e2e4de23711c51a01dc3ea570d172a35d4924742ad5eda463eb0a885e6924512801e82b241600ceaefd5db70d SHA512 497a9e7d438b0b7b0734a97cf3683baf480ecc056e96b09f1e143c362ff047a4e51e323216750501c954559579716dc024d3c51319bd2c85fa719466ce4330b2
DIST regressiontests-2021.2.tar.gz 48514312 BLAKE2B 81b007d5e5e1d054349c73dc8bc3589db328752e48a66687c0ad36be87ebe580df9cbd93b193a724669bd5765af06ec306f2e12af00a228af616de03943d6f05 SHA512 b687ddfd3dc6ec1051af2a3253633703ef1c82335d1df23379819ea47e44dfcd417e81e29610cc584d4c5fb1ee1cbc76731a3fd31b529d8cdd0b9c22f432c7ec
+DIST regressiontests-2021.3.tar.gz 48515038 BLAKE2B ee79d8adddc9c68f7d59d9e568b12bf4d1fe0e44c2810fee846ad6f689bbcacf60f5c266433946329e64e3127bc2d37a3f81f69c070c636b411b38067650c2cf SHA512 e14baa22ef2902a23125bbd9143ae7a9a4810498b321794ff1989f8d044d47db5db41d5225798fda08016c05e5f7f315178b5a6e35cdf01e3b6604670a8ce7a2
EBUILD gromacs-2018.8.ebuild 6943 BLAKE2B bd0a58000cf2c669bc4871f2f68d06b4ef7b4e40ef4a35ce306854fd1ebcdf99baed53199bc803b4fda40124226a1093168bf6fe262e27b9086bede6004db0ce SHA512 df2193024fec30dff1a9e87774267f93f46c1636893a4eb65d50ebe7314cf6cc39eee94c9b252247b40508cea2cbcbc6749681ce16c3ce461f0b2545e0418926
EBUILD gromacs-2019.6.ebuild 7264 BLAKE2B 6196f750a81562c82f1004ba3e4be05193aa9100de0d5a917df242c1287989e83992a5574812f332639c95fc009b860fcfd4b563b5e5148dfa650ce82e861f5b SHA512 ac84483eeb66765b7ae0e5489d5c3b8d293dca6108b79dfcdc35674e033af1a487d0db0bcfc7ad1158fd3ae3aedef236a6549f8ade85483ef6dfb8309cccb05a
EBUILD gromacs-2020.4.ebuild 10134 BLAKE2B efc77b2cb0981ebf3f90fbe531d54020be2e82b464dace3ab8d07d41cae060c5e073a8a3f641b4bb0431ec2717a5f990a2a6f08ceed6a805bde82742b9eba487 SHA512 f7af8d31c43abe23b9c92ce6afd0dbea4219fe48dad3d91bf19f50f80a520cb0ab98949d4f2653679de751853755e793fd0e84ad73ebf13bef17fc255d693001
EBUILD gromacs-2020.6.ebuild 10137 BLAKE2B e5f058493f7757ffcff53c892445a3ea2dd15ebb83bbd7fd186a56d85e785be75277e8329487a182d27e23f7756b02618c227ef40c2aaf0243f2a1fbeda232c6 SHA512 37df9d310ab597ce4bb69bd3d77ec20d4b6e0b825b341e5fe78b139164fd02a43b5e3d012530fd9a62500d4a63d2efa05fcbc1219ef5edcb93bf232d563af821
EBUILD gromacs-2021.2.ebuild 10361 BLAKE2B 925ad220aa14d1e0ec8ad0bc2a1b5f887c2dc7e3e419ef54b009026fa8dd251ef91821acd82e12a3126a065d709dde9a9df14f026323373d0b2909b750795b50 SHA512 15e159486ff136633fc6de6f32a5efd14b7d7276197db7bd0e83dfdf8c57ecc2374c8021783726de9b0d99512ccb8f0980506ceb53cdaaee1cecd847a699caf0
+EBUILD gromacs-2021.3.ebuild 10271 BLAKE2B 3f8c197fa70a2cace08d0852186920eb7953a25fe650262f994c78ef7cd27610c907c86deb8d031c465d5abf57154fcc2eebb48203d59c45a030dcfe85aa6f42 SHA512 7f6ac310f3a3057d3c595ff8d4f0fa275ac6d820ec445fc9f7d01e71b5da445b59ba60a0fd508dab696fe023e86eaaa15b35789de7115d4ff6e55c34e0ba682c
EBUILD gromacs-2021.9999.ebuild 10271 BLAKE2B 59d6173d1c82cfa1c084528edf2e9cf9bab8e6eefb5e3cc7c05fc43654c7be9463a24cd62a8c764afcddb9fe29fad2643cf60222608f0cdbe72eedd6c41337f2 SHA512 8434cfaf918264c8ad1e0c87f2876c6531a70d330c1205378ac65f537a562e2a72208cffca41bc85773ff1f2eb73653a4c5b1cb992f007c03bab125aa13ae4f6
EBUILD gromacs-9999.ebuild 10271 BLAKE2B 59d6173d1c82cfa1c084528edf2e9cf9bab8e6eefb5e3cc7c05fc43654c7be9463a24cd62a8c764afcddb9fe29fad2643cf60222608f0cdbe72eedd6c41337f2 SHA512 8434cfaf918264c8ad1e0c87f2876c6531a70d330c1205378ac65f537a562e2a72208cffca41bc85773ff1f2eb73653a4c5b1cb992f007c03bab125aa13ae4f6
-MISC metadata.xml 1223 BLAKE2B 9e48794b267cdb031dcc680ecce38c0d9727c2706d95a0a52d3502d4aa73d245db419a77823d10c5022d65628390b2fd476e489ec764cdd1721c9dd8295a8232 SHA512 d9320e5896bd32e892a9be573da92943236d0cf912f3417b823a415c5470ad9e37a934eafcede6ab7487197854c515ef81270e44c8503540b14dc13356beb3de
+MISC metadata.xml 1224 BLAKE2B dc6de7f135e5cbd7bdb94bc630d3c7344f5f5387305ada4f3f0fd3f027f9fa4e2c5e44120c8eab8e983fcda314680ac3d140ab61873ab21b839f912a52b21dde SHA512 d036cffac5fd3c4b8d26efdee0f4b4db8d3520f771754a0859f8e99f64d558795b6cab1efba1d4f1700027707a05a724ae96a7e257434d3894ef5fa6eed7ccba
diff --git a/sci-chemistry/gromacs/gromacs-2021.3.ebuild b/sci-chemistry/gromacs/gromacs-2021.3.ebuild
new file mode 100644
index 000000000000..6d851074d36b
--- /dev/null
+++ b/sci-chemistry/gromacs/gromacs-2021.3.ebuild
@@ -0,0 +1,355 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+CMAKE_MAKEFILE_GENERATOR="ninja"
+
+PYTHON_COMPAT=( python3_{8,9} )
+
+DISTUTILS_USE_SETUPTOOLS=no
+DISTUTILS_SINGLE_IMPL=1
+
+inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic multilib readme.gentoo-r1 toolchain-funcs xdg-utils
+
+if [[ ${PV} = *9999* ]]; then
+ EGIT_REPO_URI="
+ https://gitlab.com/gromacs/gromacs.git
+ https://github.com/gromacs/gromacs.git
+ git://git.gromacs.org/gromacs.git"
+ [[ ${PV} = 9999 ]] && EGIT_BRANCH="master" || EGIT_BRANCH="release-${PV:0:4}"
+ inherit git-r3
+else
+ SRC_URI="
+ http://ftp.gromacs.org/gromacs/${PN}-${PV/_/-}.tar.gz
+ doc? ( https://ftp.gromacs.org/manual/manual-${PV/_/-}.pdf )
+ test? ( http://ftp.gromacs.org/regressiontests/regressiontests-${PV/_/-}.tar.gz )"
+ KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux ~x64-macos"
+fi
+
+ACCE_IUSE="cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_avx512f cpu_flags_arm_neon"
+
+DESCRIPTION="The ultimate molecular dynamics simulation package"
+HOMEPAGE="http://www.gromacs.org/"
+
+# see COPYING for details
+# https://repo.or.cz/w/gromacs.git/blob/HEAD:/COPYING
+# base, vmd plugins, fftpack from numpy, blas/lapck from netlib, memtestG80 library, mpi_thread lib
+LICENSE="LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )"
+SLOT="0/${PV}"
+IUSE="X blas cuda +custom-cflags +doc build-manual double-precision +fftw +gmxapi +gmxapi-legacy +hwloc lapack +lmfit mkl mpi +offensive opencl openmp +python +single-precision test +threads +tng ${ACCE_IUSE}"
+
+CDEPEND="
+ X? (
+ x11-libs/libX11
+ x11-libs/libSM
+ x11-libs/libICE
+ )
+ blas? ( virtual/blas )
+ cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14[profiler] )
+ opencl? ( virtual/opencl )
+ fftw? ( sci-libs/fftw:3.0 )
+ hwloc? ( sys-apps/hwloc:= )
+ lapack? ( virtual/lapack )
+ lmfit? ( sci-libs/lmfit )
+ mkl? ( sci-libs/mkl )
+ mpi? ( virtual/mpi )
+ ${PYTHON_DEPS}
+ !sci-chemistry/gmxapi
+ "
+BDEPEND="${CDEPEND}
+ virtual/pkgconfig
+ build-manual? (
+ app-doc/doxygen
+ $(python_gen_cond_dep '
+ dev-python/sphinx[${PYTHON_USEDEP}]
+ ')
+ media-gfx/mscgen
+ media-gfx/graphviz
+ dev-texlive/texlive-latex
+ dev-texlive/texlive-latexextra
+ media-gfx/imagemagick
+ )"
+RDEPEND="${CDEPEND}"
+
+REQUIRED_USE="
+ || ( single-precision double-precision )
+ doc? ( !build-manual )
+ cuda? ( single-precision )
+ cuda? ( !opencl )
+ mkl? ( !blas !fftw !lapack )
+ ${PYTHON_REQUIRED_USE}"
+
+DOCS=( AUTHORS README )
+
+RESTRICT="!test? ( test )"
+
+if [[ ${PV} != *9999 ]]; then
+ S="${WORKDIR}/${PN}-${PV/_/-}"
+fi
+
+pkg_pretend() {
+ [[ $(gcc-version) == "4.1" ]] && die "gcc 4.1 is not supported by gromacs"
+ use openmp && ! tc-has-openmp && \
+ die "Please switch to an openmp compatible compiler"
+}
+
+pkg_setup() {
+ python-single-r1_pkg_setup
+}
+
+src_unpack() {
+ if [[ ${PV} != *9999 ]]; then
+ default
+ else
+ git-r3_src_unpack
+ if use test; then
+ EGIT_REPO_URI="git://git.gromacs.org/regressiontests.git" \
+ EGIT_BRANCH="${EGIT_BRANCH}" \
+ EGIT_CHECKOUT_DIR="${WORKDIR}/regressiontests"\
+ git-r3_src_unpack
+ fi
+ fi
+}
+
+src_prepare() {
+ #notes/todos
+ # -on apple: there is framework support
+
+ xdg_environment_reset #591952
+
+ cmake_src_prepare
+
+ use cuda && cuda_src_prepare
+
+ GMX_DIRS=""
+ use single-precision && GMX_DIRS+=" float"
+ use double-precision && GMX_DIRS+=" double"
+
+ if use test; then
+ for x in ${GMX_DIRS}; do
+ mkdir -p "${WORKDIR}/${P}_${x}" || die
+ cp -al "${WORKDIR}/regressiontests"* "${WORKDIR}/${P}_${x}/tests" || die
+ done
+ fi
+
+ DOC_CONTENTS="Gromacs can use sci-chemistry/vmd to read additional file formats"
+ if use build-manual; then
+ # try to create policy for imagemagik
+ mkdir -p ${HOME}/.config/ImageMagick
+ cat >> ${HOME}/.config/ImageMagick/policy.xml <<- EOF
+ <?xml version="1.0" encoding="UTF-8"?>
+ <!DOCTYPE policymap [
+ <!ELEMENT policymap (policy)+>
+ !ATTLIST policymap xmlns CDATA #FIXED ''>
+ <!ELEMENT policy EMPTY>
+ <!ATTLIST policy xmlns CDATA #FIXED '' domain NMTOKEN #REQUIRED
+ name NMTOKEN #IMPLIED pattern CDATA #IMPLIED rights NMTOKEN #IMPLIED
+ stealth NMTOKEN #IMPLIED value CDATA #IMPLIED>
+ ]>
+ <policymap>
+ <policy domain="coder" rights="read | write" pattern="PS" />
+ <policy domain="coder" rights="read | write" pattern="PS2" />
+ <policy domain="coder" rights="read | write" pattern="PS3" />
+ <policy domain="coder" rights="read | write" pattern="EPS" />
+ <policy domain="coder" rights="read | write" pattern="PDF" />
+ <policy domain="coder" rights="read | write" pattern="XPS" />
+ </policymap>
+ EOF
+ fi
+}
+
+src_configure() {
+ local mycmakeargs_pre=( ) extra fft_opts=( )
+
+ if use custom-cflags; then
+ #go from slowest to fastest acceleration
+ local acce="None"
+ if (use amd64 || use x86); then
+ use cpu_flags_x86_sse2 && acce="SSE2"
+ use cpu_flags_x86_sse4_1 && acce="SSE4.1"
+ use cpu_flags_x86_fma4 && acce="AVX_128_FMA"
+ use cpu_flags_x86_avx && acce="AVX_256"
+ use cpu_flags_x86_avx2 && acce="AVX2_256"
+ use cpu_flags_x86_avx512f && acce="AVX_512"
+ elif (use arm); then
+ use cpu_flags_arm_neon && acce="ARM_NEON"
+ elif (use arm64); then
+ use cpu_flags_arm_neon && acce="ARM_NEON_ASIMD"
+ fi
+ else
+ strip-flags
+ fi
+
+ #to create man pages, build tree binaries are executed (bug #398437)
+ [[ ${CHOST} = *-darwin* ]] && \
+ extra+=" -DCMAKE_BUILD_WITH_INSTALL_RPATH=OFF"
+
+ if use fftw; then
+ fft_opts=( -DGMX_FFT_LIBRARY=fftw3 )
+ elif use mkl && has_version "=sci-libs/mkl-10*"; then
+ fft_opts=( -DGMX_FFT_LIBRARY=mkl
+ -DMKL_INCLUDE_DIR="${MKLROOT}/include"
+ -DMKL_LIBRARIES="$(echo /opt/intel/mkl/10.0.5.025/lib/*/libmkl.so);$(echo /opt/intel/mkl/10.0.5.025/lib/*/libiomp*.so)"
+ )
+ elif use mkl; then
+ local bits=$(get_libdir)
+ fft_opts=( -DGMX_FFT_LIBRARY=mkl
+ -DMKL_INCLUDE_DIR="$(echo /opt/intel/*/mkl/include)"
+ -DMKL_LIBRARIES="$(echo /opt/intel/*/mkl/lib/*${bits/lib}/libmkl_rt.so)"
+ )
+ else
+ fft_opts=( -DGMX_FFT_LIBRARY=fftpack )
+ fi
+
+ if use lmfit; then
+ local lmfit_opts=( -DGMX_USE_LMFIT=EXTERNAL )
+ else
+ local lmfit_opts=( -DGMX_USE_LMFIT=INTERNAL )
+ fi
+
+ mycmakeargs_pre+=(
+ "${fft_opts[@]}"
+ "${lmfit_opts[@]}"
+ -DGMX_X11=$(usex X)
+ -DGMX_EXTERNAL_BLAS=$(usex blas)
+ -DGMX_EXTERNAL_LAPACK=$(usex lapack)
+ -DGMX_OPENMP=$(usex openmp)
+ -DGMX_COOL_QUOTES=$(usex offensive)
+ -DGMX_USE_TNG=$(usex tng)
+ -DGMX_BUILD_MANUAL=$(usex build-manual)
+ -DGMX_HWLOC=$(usex hwloc)
+ -DGMX_DEFAULT_SUFFIX=off
+ -DGMX_SIMD="$acce"
+ -DGMX_VMD_PLUGIN_PATH="${EPREFIX}/usr/$(get_libdir)/vmd/plugins/*/molfile/"
+ -DBUILD_TESTING=$(usex test)
+ -DGMX_BUILD_UNITTESTS=$(usex test)
+ -DPYTHON_EXECUTABLE="${EPREFIX}/usr/bin/${EPYTHON}"
+ ${extra}
+ )
+
+ for x in ${GMX_DIRS}; do
+ einfo "Configuring for ${x} precision"
+ local suffix=""
+ #if we build single and double - double is suffixed
+ use double-precision && use single-precision && \
+ [[ ${x} = "double" ]] && suffix="_d"
+ local p
+ [[ ${x} = "double" ]] && p="-DGMX_DOUBLE=ON" || p="-DGMX_DOUBLE=OFF"
+ local gpu=( "-DGMX_GPU=OFF" )
+ [[ ${x} = "float" ]] && use cuda && gpu=( "-DGMX_GPU=CUDA" )
+ use opencl && gpu=( "-DGMX_GPU=OPENCL" )
+ mycmakeargs=(
+ ${mycmakeargs_pre[@]} ${p}
+ -DGMX_MPI=OFF
+ -DGMX_THREAD_MPI=$(usex threads)
+ -DGMXAPI=$(usex gmxapi)
+ -DGMX_INSTALL_LEGACY_API=$(usex gmxapi-legacy)
+ "${gpu[@]}"
+ "$(use test && echo -DREGRESSIONTEST_PATH="${WORKDIR}/${P}_${x}/tests")"
+ -DGMX_BINARY_SUFFIX="${suffix}"
+ -DGMX_LIBS_SUFFIX="${suffix}"
+ -DGMX_PYTHON_PACKAGE=$(usex python)
+ )
+ BUILD_DIR="${WORKDIR}/${P}_${x}" cmake_src_configure
+ [[ ${CHOST} != *-darwin* ]] || \
+ sed -i '/SET(CMAKE_INSTALL_NAME_DIR/s/^/#/' "${WORKDIR}/${P}_${x}/gentoo_rules.cmake" || die
+ use mpi || continue
+ einfo "Configuring for ${x} precision with mpi"
+ mycmakeargs=(
+ ${mycmakeargs_pre[@]} ${p}
+ -DGMX_THREAD_MPI=OFF
+ -DGMX_MPI=ON
+ -DGMX_OPENMM=OFF
+ -DGMXAPI=OFF
+ "${opencl[@]}"
+ "${cuda[@]}"
+ -DGMX_BUILD_MDRUN_ONLY=ON
+ -DBUILD_SHARED_LIBS=OFF
+ -DGMX_BUILD_MANUAL=OFF
+ -DGMX_BINARY_SUFFIX="_mpi${suffix}"
+ -DGMX_LIBS_SUFFIX="_mpi${suffix}"
+ )
+ BUILD_DIR="${WORKDIR}/${P}_${x}_mpi" CC="mpicc" cmake_src_configure
+ [[ ${CHOST} != *-darwin* ]] || \
+ sed -i '/SET(CMAKE_INSTALL_NAME_DIR/s/^/#/' "${WORKDIR}/${P}_${x}_mpi/gentoo_rules.cmake" || die
+ done
+}
+
+src_compile() {
+ for x in ${GMX_DIRS}; do
+ einfo "Compiling for ${x} precision"
+ BUILD_DIR="${WORKDIR}/${P}_${x}"\
+ cmake_src_compile
+ if use python; then
+ BUILD_DIR="${WORKDIR}/${P}_${x}"\
+ cmake_src_compile python_packaging/all
+ BUILD_DIR="${WORKDIR}/${P}" \
+ distutils-r1_src_compile
+ fi
+ # not 100% necessary for rel ebuilds as available from website
+ if use build-manual; then
+ BUILD_DIR="${WORKDIR}/${P}_${x}"\
+ cmake_src_compile manual
+ fi
+ use mpi || continue
+ einfo "Compiling for ${x} precision with mpi"
+ BUILD_DIR="${WORKDIR}/${P}_${x}_mpi"\
+ cmake_src_compile
+ done
+}
+
+src_test() {
+ for x in ${GMX_DIRS}; do
+ BUILD_DIR="${WORKDIR}/${P}_${x}"\
+ cmake_src_compile check
+ done
+}
+
+src_install() {
+ for x in ${GMX_DIRS}; do
+ BUILD_DIR="${WORKDIR}/${P}_${x}" \
+ cmake_src_install
+ if use python; then
+ BUILD_DIR="${WORKDIR}/${P}_${x}" \
+ cmake_src_install python_packaging/install
+ fi
+ if use build-manual; then
+ newdoc "${WORKDIR}/${P}_${x}"/docs/manual/gromacs.pdf "${PN}-manual-${PV}.pdf"
+ fi
+
+ if use doc; then
+ if [[ ${PV} != *9999* ]]; then
+ newdoc "${DISTDIR}/manual-${PV}.pdf" "${PN}-manual-${PV}.pdf"
+ fi
+ fi
+
+ use mpi || continue
+ BUILD_DIR="${WORKDIR}/${P}_${x}_mpi" \
+ cmake_src_install
+ done
+
+ if use tng; then
+ insinto /usr/include/tng
+ doins src/external/tng_io/include/tng/*h
+ fi
+ # drop unneeded stuff
+ rm "${ED}"/usr/bin/GMXRC* || die
+ for x in "${ED}"/usr/bin/gmx-completion-*.bash ; do
+ local n=${x##*/gmx-completion-}
+ n="${n%.bash}"
+ cat "${ED}"/usr/bin/gmx-completion.bash "$x" > "${T}/${n}" || die
+ newbashcomp "${T}"/"${n}" "${n}"
+ done
+ rm "${ED}"/usr/bin/gmx-completion*.bash || die
+ readme.gentoo_create_doc
+}
+
+pkg_postinst() {
+ einfo
+ einfo "Please read and cite:"
+ einfo "Gromacs 4, J. Chem. Theory Comput. 4, 435 (2008). "
+ einfo "https://dx.doi.org/10.1021/ct700301q"
+ einfo
+ readme.gentoo_print_elog
+}
diff --git a/sci-chemistry/gromacs/metadata.xml b/sci-chemistry/gromacs/metadata.xml
index 44134f443625..0b64bbe8abdd 100644
--- a/sci-chemistry/gromacs/metadata.xml
+++ b/sci-chemistry/gromacs/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>alexxy@gentoo.org</email>
diff --git a/sci-chemistry/ksdssp/Manifest b/sci-chemistry/ksdssp/Manifest
index 9d6e4c3e7bc1..296e091155b3 100644
--- a/sci-chemistry/ksdssp/Manifest
+++ b/sci-chemistry/ksdssp/Manifest
@@ -1,3 +1,3 @@
DIST ksdssp-040728.shar 104347 BLAKE2B f77ba1fd83e9dd959dabf49818c541605eb8fba895880dbd8324cd02a0528d7961ced200de4b64c18c897a18e9f78474293a9f95fee9beace36f5faba61fcaa2 SHA512 17c32bea1f32acfd31353d0378fe2a664a8922db8b929da4b9b10ac279013946911acd2a26ab3ab227ae160352c8313dcf742fae8c139a90ac11f772f17a1689
EBUILD ksdssp-040728-r1.ebuild 905 BLAKE2B 59721748af82ddd4fb21c7de46b4902f6af95656b5cc97685189500117a9e80ded0fb91944d5503347ddcb792037076621f61946b54e495098b8fe417a2cb9d3 SHA512 97bc00690752386c5048f5c87d5f926eb68275b449439e82186371124feb534c0e27ce67ca1c8d1521ce42935a3c125f53981ac07e75482622f620483595837d
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/ksdssp/metadata.xml b/sci-chemistry/ksdssp/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/ksdssp/metadata.xml
+++ b/sci-chemistry/ksdssp/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/mdtraj/Manifest b/sci-chemistry/mdtraj/Manifest
index 4b1466d3dd84..f63d847c79c7 100644
--- a/sci-chemistry/mdtraj/Manifest
+++ b/sci-chemistry/mdtraj/Manifest
@@ -1,3 +1,3 @@
DIST mdtraj-1.9.4.tar.gz 2133297 BLAKE2B c1507246bf0c8d7f6753f3d505f940e6f2f001361e42f10c9775647a7e6b58edf2d3953a8e48932f6bf9ad90b27e1baf30df6a7c1a590e49a860175822a25360 SHA512 55f67546db20ce63da3af2231df459e9983e15a65da960784613f746dcce820fe6b0deffbb21b528e93fc6cf674dc7a25ee11110894d2a89e5504e20d200ca38
-EBUILD mdtraj-1.9.4.ebuild 1073 BLAKE2B 1db5d2a98cd11ad75869a4835103d20882e0594374c518143765cde9c80972145009a54e249bb2658886b74fbbf761b12e1799a79e61ffaafca6d7aa3cccc087 SHA512 6e1467c4d883d39797e03ada27fa2e769f0c869a5df0142671bbfaa3af30a4ce91550b4b30627b5711908cb5fe740eeb6b96d8cd33a4502156c136b4bb040f5b
-MISC metadata.xml 259 BLAKE2B dfc879984b6adce945d0e0a50f6ede2bca87147b9db99491359cdeccc2e74a20d56e14ae8903dbb80c94854f89bee539f14a4e3ce864204e277accf3f124a748 SHA512 19fb78cf4029c154954a40df40e28fc8d98a8b7e6b42f97259f664d44c29b284feffb9d073cadc7f90b5654a64b2466e186cb677d3a11830206f173eb9057706
+EBUILD mdtraj-1.9.4.ebuild 1040 BLAKE2B ae63c3005eb964eb055b110db6da88f5b488e2c4ed4caa566fe2d4557b69d229e21b7e493f2e2360d1f8dea4d4237e511e7a8d6b5827302b7ed3ebc33d5820ba SHA512 f3eae0d7bfc5d59ab6b3b2d9ff9d81c406e15f1d5dc7249382a928b4d378b722f758890d28e112f5659de4ba15d0a9eba4a8488610ccaf1d43885b5a96eddd07
+MISC metadata.xml 260 BLAKE2B 14d3d7872b9a3cb341301daf85c6b037c567163317516100d5af08e7ae02970252f210e90118d5df9e0cf6e0b3560add3a7894d379609b864e60dfdda3036423 SHA512 973385fccdcb0ccc36e00a09dc85204cf15081b8b61bc20e02d7d1311cb05af4927f01aac36ec93275158f5b990874ca03ab7d381cf6ee6f5e30bc4926d2f045
diff --git a/sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild b/sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild
index 229f664042a3..f618155f1397 100644
--- a/sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild
+++ b/sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild
@@ -1,9 +1,8 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
PYTHON_COMPAT=( python3_{7,8,9} )
-DISTUTILS_USE_SETUPTOOLS=rdepend
inherit distutils-r1
diff --git a/sci-chemistry/mdtraj/metadata.xml b/sci-chemistry/mdtraj/metadata.xml
index 8425c0d53cb0..7d3acaf5d252 100644
--- a/sci-chemistry/mdtraj/metadata.xml
+++ b/sci-chemistry/mdtraj/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci@gentoo.org</email>
diff --git a/sci-chemistry/metadata.xml b/sci-chemistry/metadata.xml
index 7c6e6107936e..3f779c2ba92b 100644
--- a/sci-chemistry/metadata.xml
+++ b/sci-chemistry/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE catmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE catmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<catmetadata>
<longdescription lang="en">
The sci-chemistry category contains software that can be used
diff --git a/sci-chemistry/mm-align/Manifest b/sci-chemistry/mm-align/Manifest
index 442829c48ad3..86393b5285e8 100644
--- a/sci-chemistry/mm-align/Manifest
+++ b/sci-chemistry/mm-align/Manifest
@@ -1,4 +1,4 @@
AUX CMakeLists.txt 142 BLAKE2B 43a1c754ff92fa7b11a2cbe8616626b97dfe12b2ada84f6fe9882bc0386df6ead6b00aaff897f958001e0ac2fded9fe87b3d9e7da559cc3b6c0ff2d79c66e921 SHA512 edeaeed165d8b89edaf0f8e1e50870c61fa1446e3b8febb367451cf93d160679e042131256e3a5d52406a4f1731f94414550cacb8dc023246dbda12c6586a00c
DIST MM-align-20120321.tar.xz 20072 BLAKE2B be53cff43b220c9c44bbd600e4e2870e3987da25744a4bf3da0bc8cf7bc2619c93839e27327d23b5ef3bfbf9aca86b865717c48eb5d91a9da7b977909fb3bc39 SHA512 193c3b16b2d9fb0aaacf18b203fcf0240de7b11b4c0ce99fc571c277aa6e624b7b8b4df625e34433a5dec4349bb5bf6ae0368609c1738337923cf3b4d06428bc
EBUILD mm-align-20120321.ebuild 512 BLAKE2B c59652bc65df34ce0a26f8781b4794bf26a55838a66a27e93a36d2091b2f0668043a56cb5899c09e85c017ae23ef0d8db02d672c47cf47db5ab8bfdfeeb122ce SHA512 0da84f046c7aaa3023a0512397f09b298a5d99ea8623126aa1a4c2a18e3fc9b93eab635253a424e149013d39c47e1ab608edb68b540edb40fc3db7e055fdded8
-MISC metadata.xml 1450 BLAKE2B 0ef448f2402610c9ff6bc374006037acc5206ce3f834a1e868d69a70095a923b52c7882dd4bebd89ebb56f4726e33cf1da9945154c78233b056ce141a9db70ac SHA512 6769f81c777dc048f3342a308219623b2119e8f79502c98edab0ebdf0c4cc4584c504ce1c3e6d5e968ecdb9c83e0e40a3344205b0bf33870d3fab832707c62fa
+MISC metadata.xml 1451 BLAKE2B 9f5071f4eb82f5a49b9b3dd690c4105f8b56b80fda035544f864ff3062ac5fdf4d6b2c16a2e42eacc3bf4cbc64b3ad27d090ffd635506ce3789556fb7e023284 SHA512 908da672d7cf091949b7f1120764a3ea93a67b48edd2e391e66d4ca1d5ce39a25acecdee723a0444c680b4e835e197197cef56e85e1bd6018999df1bc330d797
diff --git a/sci-chemistry/mm-align/metadata.xml b/sci-chemistry/mm-align/metadata.xml
index 5653687f9cfd..03c48e987ffb 100644
--- a/sci-chemistry/mm-align/metadata.xml
+++ b/sci-chemistry/mm-align/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/modeller/Manifest b/sci-chemistry/modeller/Manifest
index 7e8efe4ee960..81bceea7f910 100644
--- a/sci-chemistry/modeller/Manifest
+++ b/sci-chemistry/modeller/Manifest
@@ -1,3 +1,3 @@
DIST modeller-9.25.tar.gz 44820658 BLAKE2B b3e8a3cc8cc70689a25bc5ed2eee294d67bef8eea9ed4b64d41aba3a27c0bc428ae58e74d734da0eaab7e4fabb213d098b9ba66b9569557159ac7d4a58244b0a SHA512 93f273aba0ec0f884cde5bbcc24769a09386bfc6bf1744d80001e41924b1a682225ba3c554fb9898ef3bfd1fd8451f9458bb92431b20f2f51b01781e79686c91
EBUILD modeller-9.25.ebuild 3847 BLAKE2B 410b9f2e700d683f4e08fc973096fab394707b718a36c1266a157ac5778b9210b725db00aabc541ac0f361fb5e3d6b728c218ad9b2bd277247d8c787b8ff5de3 SHA512 6b5d1b11aa56a2fc552ea41c41c9aea023bb3a782af21a498e042c96599d47dc84058137f03e25e16177d5ce1be59af3fce9b09043b15cb9433685ab86119785
-MISC metadata.xml 374 BLAKE2B d93e2ad2f09971909382ad65fc5f5033487979b0694f9dc656439573973f55ce1865e5a30584e55e1c48fdd93898601ac2b11e269fb2b1c5adc3ff8dde66f35d SHA512 1c61c58e1cfbbb42342f7a87625e0044e51523f7a2f7270ecfea537c622965e64195fc88eb8f70fac648a0154a19f4a852b88383de1dcd6e17ff0ac0dc6e22d8
+MISC metadata.xml 375 BLAKE2B 949d039d3cd24da52efe20f58e7da07b4371e90ef72f314d076110b4604af1c0b7a77c1241172cf5e0a1c40363a00728d14d6faf30af73d27317f24d5a6c2289 SHA512 52791b3cb6a3998676f23e16346b9c4f447f42de8a58e612eebdf8ebfd34bc724c4994c3accebf00d552187bc80d1c097f73bd02b6fd6874a84441627eb785ca
diff --git a/sci-chemistry/modeller/metadata.xml b/sci-chemistry/modeller/metadata.xml
index 7daa2ce7e5f8..22631b58bc2b 100644
--- a/sci-chemistry/modeller/metadata.xml
+++ b/sci-chemistry/modeller/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>alexxy@gentoo.org</email>
diff --git a/sci-chemistry/molden/Manifest b/sci-chemistry/molden/Manifest
index fee8e3ef66e4..7ca2db01b867 100644
--- a/sci-chemistry/molden/Manifest
+++ b/sci-chemistry/molden/Manifest
@@ -5,4 +5,4 @@ AUX molden-5.0-overflow.patch 341 BLAKE2B c7285c87c0741ecf6bce3bad89883ed6e7720c
AUX molden-5.5-gcc8.patch 328 BLAKE2B e098e680a5b75ff09fbaecf44609055584b0f1c49edc0ea16b81dbff68b06883dc6317340b3dc6b26836958d1f561b3aed383964f7c65126079f74b3023f96dd SHA512 cc1a8c08b9081ff138aedda11887295f0eb31b97174ce45bffae8e563318388035948775f03d39823280103ea522a20939b6294e3d3721e599e6790e4a5695e2
DIST molden5.5.tar.gz 4934764 BLAKE2B 6ce71f928ed9aacf8fe9830c4c36a675f81d63e97d08e96519ff74d172540ae0a9af25ca966d6c02cdcbbc43633a0ef80be9d31ef98a80d59a8e1a13374c2f51 SHA512 45269d2c7a52b3b2bf4fdb5f4ca3912637b3414ff9dfcd0d4f23815b3dcf7a53ffee717420d4fbf286b71c972539e756a440f5e37b7b7325ab312c25fc6c47b0
EBUILD molden-5.5.ebuild 1735 BLAKE2B bc176723397f3d0f6f6fe35247c065f333e718be7eaa3ed04487bc9138dca53d6c01653fb99dee79f3098a2aeff5b41427171aa75bc4dc534175fb8e59a3934a SHA512 d4c537301b603b410fbb9637bf97a2f912765545e497bb850335a8d1013d71b394ff12a25bfce5a4293b830f46beaa75597df51ad06bcadb8ea63bf6b57ba6f1
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/molden/metadata.xml b/sci-chemistry/molden/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/molden/metadata.xml
+++ b/sci-chemistry/molden/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/moldy/Manifest b/sci-chemistry/moldy/Manifest
index 8774ffcf18f3..198544b51e48 100644
--- a/sci-chemistry/moldy/Manifest
+++ b/sci-chemistry/moldy/Manifest
@@ -1,4 +1,4 @@
AUX 2.16e-as-needed.patch 3226 BLAKE2B 777b34d43da82b036e401c398d0f59a5f268905a399f38277be73ba6bdaefd6f1de2ec748302edfc68c6389acb22fa50d72b465522b1f2d5bbd14eca289d7595 SHA512 b32461bb052c908106f0f8d74be4eba52daa41ba592a7ba6083edc2a54c4a14003cf33560572e57f2b370ad5ea1f703e388855e8e7fa67ccec40e3015a8f5803
DIST moldy-2.16e.tar.gz 488410 BLAKE2B 44ff1dacc66922ba11297ca54c645f209b782b8cde50e427d54d1d249a93b718eeb865357ea47b820801fdbca325d5f0d6027fe11ce6e0a842e77d1970a0467c SHA512 b672f4e5c8843277d1b66eedf5f7ad87be0b4c014e0d6bfda4ef941cd9bfeec68d94a361e28531cc3794ee2e4a6937f15c462c69f9adcfcfe5254c3c677fe877
EBUILD moldy-2.16e-r2.ebuild 1747 BLAKE2B 961cd390e657e578d9873bc7a15634333c3f451591610cf44936b94360e644118fca4254e88c62a020fbaaa169cce2b2d970335b550571e9bf75780bba0cc2b4 SHA512 c8458f6d37289c6ecb147c1a0b53d7888a58207d1bf1a6de891bcd9c8ce463355f3b350f744bbc3a299c1b1c10b3b237352572c95245d629f62bb8bbbc317733
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/moldy/metadata.xml b/sci-chemistry/moldy/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/moldy/metadata.xml
+++ b/sci-chemistry/moldy/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/molequeue/Manifest b/sci-chemistry/molequeue/Manifest
index 05b6b3c7ca5c..1f5a79a5f87e 100644
--- a/sci-chemistry/molequeue/Manifest
+++ b/sci-chemistry/molequeue/Manifest
@@ -1,3 +1,3 @@
DIST molequeue-0.9.0.tar.gz 604015 BLAKE2B 37e7f404a0fefb40defb198295659372121fbe770269c2f9fb92e856aceb8222bec5e83939ecea061b76f925c0cbde1be0a854db41f992a92a2b2b9e0651f2e1 SHA512 87ddd8ca59227cab60c0ce2643e5bd435d9ac7e23b929659b95f190478734a5b71d4935f37d03eeadbc39939cbffb3604e0a283d50b0a23a1a000b57c1fce335
EBUILD molequeue-0.9.0-r1.ebuild 1959 BLAKE2B a6e50572483f1670a2c743584ec1c2e7045fa145897418d01df5e68929e3a640b34d7b85d33973a6a47dd2e250862c0cc72fa7190fe62c2ed30ba32edeca4d8b SHA512 62405759c9d650a8ca21bc3a23208c93283111c194d721e334656a75daa42af70afb0c1ff7055b9d8b46f2c8193b37ce8b561ea7d1a2058cbc1eb57e64fe53b3
-MISC metadata.xml 1257 BLAKE2B 181f9234f11d0cb14fd6b93b42ef153c089d4df8dcb7cf72bc710dbee11bf4bb573f37ea703d02dbe17fa1f39c0aaf591c6d28ad1429abced5108b9ce39f2030 SHA512 10e3dd48ec1e54bc0d47d4c2f0aca427875cc0ceb59a93ab41ab2734607aa6474e80f3ae622e45fa319753591f16439118dd0b301068cb3e16fd79ff11a4f058
+MISC metadata.xml 1258 BLAKE2B db62408b81fa39c138916de98df72a14b7d66bfaa7ac50e6afe5e138ce4d3627cbb7f0544e075ecdaff70b04ee6023d5f2381bd0f130d5075b060c5ed8bfabb5 SHA512 b4b028602d96c58d8744d016176361d41a1ac4c3dbb0e14edb3526d683cfdd8607ba3c627529edcdd5fe97ba484cb8e1fcaf797e4c4d0253f0bb2321a2140512
diff --git a/sci-chemistry/molequeue/metadata.xml b/sci-chemistry/molequeue/metadata.xml
index 070683db0c10..a1173b822146 100644
--- a/sci-chemistry/molequeue/metadata.xml
+++ b/sci-chemistry/molequeue/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci@gentoo.org</email>
diff --git a/sci-chemistry/molmol/Manifest b/sci-chemistry/molmol/Manifest
index 98a2d7296786..4602e9313966 100644
--- a/sci-chemistry/molmol/Manifest
+++ b/sci-chemistry/molmol/Manifest
@@ -3,4 +3,4 @@ DIST molmol-2k.2.0-src.tar.gz 1088805 BLAKE2B cd649604f6ee491d3a4485391ecdaa48dc
DIST molmol-patches.tbz2 17528 BLAKE2B b91270a980f290edc169be00639e86b3272281c9fe237750f5778eab1605ed482c09bdaf90660a5edf74bd04b3e31adc755e77e39aea6c75d88b6db9bf47a6d6 SHA512 bd94baf0a378f40f854f396963edd9b9e4afc5c56462ee6f8b68889290afdb4c5d9b10878aa5619d0a70153453fe6ee8e7540064522c6db0291ae9162bba9287
DIST molmol.png 509 BLAKE2B 981217602d128da2eb3765ca07580ed58164a4aa8c2d3e016cd54d9f5133418a7c87bbf0f8a83bcbd5d60ad568bf4938ce680eea315716166592e37f815b5aab SHA512 233d3be0c2e2759a8b064b4cf3708f96817f34eb2a397d5122b26a902864a0f1dca1762f8bcc6981cd030e2644cbedef9eb20c7756016fcf27565e3ed586c271
EBUILD molmol-2k_p2-r5.ebuild 2233 BLAKE2B d0708456f6d32318841ff23e4801470152a4d3443e89f38e43294b57f815f5c04b0d2cfcfb4eb01d3dfb0ba6d01b881db22148c5e39f4cbe3fb9a71217bb1ff1 SHA512 3491df5f67b017100ff7640a33cb18285b67f527dad141363c5edc09ab5fc5e10d8e11a26ae8b48489a4f559090215214cf692b0509b690acb792ef6ad958b35
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/molmol/metadata.xml b/sci-chemistry/molmol/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/molmol/metadata.xml
+++ b/sci-chemistry/molmol/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/molscript/Manifest b/sci-chemistry/molscript/Manifest
index b2d92abfac12..610071ef5d4b 100644
--- a/sci-chemistry/molscript/Manifest
+++ b/sci-chemistry/molscript/Manifest
@@ -5,4 +5,4 @@ AUX fix-makefile-shared.patch 2051 BLAKE2B 145edf9dc11ee0f59325fcc3e2f981de03aea
AUX glutbitmap.h 845 BLAKE2B e5c5a6fed84021a35e132301c06efa9b877fc475a1230a58c93e9e24fb0b220cea1bcb68d411ed17897877dd3b9c4e3d6a1646906b0f09819449e6321e8f108a SHA512 a11e8c23472ed8950c8b56fdfd57ddd9c6539f427437ab26a2d3561ad388ca24a36029dee9ff6b8af759eeadf89fbd45dd10279d8089e6978eec07858624c7da
DIST molscript-2.1.2.tar.gz 412497 BLAKE2B ca28cf90cfbd1314351abd0c32e4a4012f2f6f178537e12918942f3c5e21e6875d045d46d76e645b4e9982d6d0784029b3d26eb17bb65aa486ecbea70842d9b4 SHA512 0f82936da3123770c0fdb703094dbb5289cc39e9f9ffd034d8dba563f8d615788f67040d38158ac2f203b480c5838a7d8e71ca07bc5098181c1e3cfea26703a4
EBUILD molscript-2.1.2-r2.ebuild 1401 BLAKE2B 540ffefe06faf6189bd649131c514066296504ab99b2c1480b2428ef42a84a72e313c29928b7a68d7199916e116796c46126837ea635d82cc791da306293646a SHA512 86f2af9b346e45eeeb096fd6e1a0c46977789307f4acfa5524551f5e6afe08bc19412962da91815c5ba0062a78194b0bd5d8e18eb6dba6cf98e2750c20d71c35
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/molscript/metadata.xml b/sci-chemistry/molscript/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/molscript/metadata.xml
+++ b/sci-chemistry/molscript/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/molsketch/Manifest b/sci-chemistry/molsketch/Manifest
index f995fab859e4..e3e572d45fda 100644
--- a/sci-chemistry/molsketch/Manifest
+++ b/sci-chemistry/molsketch/Manifest
@@ -2,4 +2,4 @@ AUX molsketch-0.3.0-_DEFAULT_SOURCE.patch 661 BLAKE2B 48e877f41de2b27d1c6bbdac34
AUX molsketch-0.4.1-more-quotes.patch 478 BLAKE2B 857f6a6f2514a4322f2a178aed0232f6f18d06831fea72ac8bbfa2cb806cdb2f73f2daeb4e9b8326be9dbd96518047c24f2721c3509d1551d90cfa80ca0105a8 SHA512 015344abb4aaa7f214e4e8a7eebe1a7a8f4d43b8a76a9c5f984fc4c5cf8da450430330543fe69d481ceec25c5a59ee332439654fd4ce82ce080aa4883cc1d113
DIST Molsketch-0.4.1-src.tar.gz 1499842 BLAKE2B 22584f012e838037f9e23c16da6c63984604002884d279b2b6012d80eb08af9ee18b4d364fa29327572854fccad34840f97413b29b487cfbeb6496a2a8003d17 SHA512 263b088c2b8d01c1f13802b18aea6f6784580fe1a806de45b0e1ecd9f29024350e01a611bdeed1891938acc733a42746203d345d3be13ebaf4c309413e86bf26
EBUILD molsketch-0.4.1-r1.ebuild 1244 BLAKE2B afd73d8fcbdaa7bad2a61d4df7d7ec8e064eb204d549339328ee077e2dc75bc03d800fa16c2674e50af96f59054d21718f9422020564f7a991df16990cd4b622 SHA512 5aed6b4c27ce78c50e7dd0d12cfd18179d58500ce6c166f86c44d0edaba15e155c27e72acb77be07b7a562059b75e7c1cb03390275075cf03b7d6395b31de9b5
-MISC metadata.xml 609 BLAKE2B 07b5bc6ee3fbbbd071bac3959e4f42a6d38cb6dff2ca6e86f9d6e0108c9f3370dc1a99ea5b4a26b58769d45d064e85e9c0c5c6cacf980b68def32e7c63b1cf54 SHA512 34417299d583ff8a830dbe5e4898e999c3a4d72f11cc032f1274e12ad9dfb424d7d8eaaa2e5dac8efb748d7da68691e4ea1b4b1a426407b8dadc740ba109d61c
+MISC metadata.xml 610 BLAKE2B f7e80a8160010e450b7808ab92056dc1f514a5cd985c335e853f0a92d1d86a0d5818a8d95c4ac5b26eb68fe67309bf1231f2455b2498209b840eea04a0006c20 SHA512 fc7180beb4202b3fd4cecb9e384fc8617e89e173e92d62bdcb8e2cb68c32ef57802e34a906ea5a7cc216a1f5b52579309a9a944a4307b31de4b2d1f3fcadf846
diff --git a/sci-chemistry/molsketch/metadata.xml b/sci-chemistry/molsketch/metadata.xml
index 4ddbdcb92cc0..cc6c6d647153 100644
--- a/sci-chemistry/molsketch/metadata.xml
+++ b/sci-chemistry/molsketch/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/mopac7/Manifest b/sci-chemistry/mopac7/Manifest
index ca9982c34338..f7ddd9f01ecb 100644
--- a/sci-chemistry/mopac7/Manifest
+++ b/sci-chemistry/mopac7/Manifest
@@ -3,4 +3,4 @@ DIST dcart.f 11044 BLAKE2B 7414804ecfab9a7cbddee664b85e6e2e8c1d8fe1e1f73d480dd1a
DIST gmxmop.f 38956 BLAKE2B e411feca5104e91ae8fd2008de61d18cc214beb3b2a7aa09a80269fb935e27ba1b1cb89fa30eedbfc4f6c4734c22d932e57d5905c175ae9f56c4affee7b0ca04 SHA512 38bb2e5749c4d3c8c24f15682f72e40cb4edb6517c7916cecee1d21675b1870c0fe331ba2ec40312408dec473141e7742d1e155d4b64f1c2a25bfa4e11885194
DIST mopac7-1.15.tar.gz 764547 BLAKE2B 6e037862007221955d0ad65f3c002a3d2e461950a2bc0efac9d195cf1d9d856842d02bc380ce236c3d48f863a144875950f5c86f8f3ac936b8b098472f7f7a0d SHA512 e0ccd643caa6dbd7e156867530d79e50e10243f5e3b5f8bc57781e68e1daf26f2a0e6987fff00afe07eb0fcb98cbd9f01e4cfa5d20acc0d8ab3cca632968636e
EBUILD mopac7-1.15-r1.ebuild 1851 BLAKE2B e3922c1a7937bb5a5ec85b7ef94a3c7eee007d6488e74bbed300c0f4904b83921aaea1b6e84932e869a5e1491a305b10b1123b3aacb36f5952505b2d70165b0f SHA512 bc58c9b43d6e63e8fa25c33d199bdc924b841cf60c2ac3e5b387b5912ead41153684f15fa7231b056cfe84b62c44d16c004c78137f4aa0e805ee2b503af57b35
-MISC metadata.xml 434 BLAKE2B 011dd4486a917b69a58d398027b3af606bae6a6ea2b470b2f3f3d15f64b6db46a8a77ae4a52d78249ac8917d1a25bcbbcb5af62bea6677c5d4b433e47e9a8356 SHA512 77b3e0b69436a4f199c5ae3d9382c9b6cf2049ffd98144a2dc291495de9e8daa9deb6141d77b917f6e29902ad862c9044e7661ca7f0ae5e4fc68983857b3f6f2
+MISC metadata.xml 435 BLAKE2B 12efd7ecfe6c9b07411d62992a225848f3787b58a59765e373fdc98ce22c3b50763243ac70efa1d7a7ec3309bc519dd433d41b778fe8f18cdfbdae971e0ee82c SHA512 d624b1181bdd0d66062507e7793eb25d24c447fa9ffbe8ee1645c88b843e6822e80af087bf6073ac191947074491159331f2021b884f8b7cd2237cf3e013ebb4
diff --git a/sci-chemistry/mopac7/metadata.xml b/sci-chemistry/mopac7/metadata.xml
index efd0c0d00e55..cd1cacd0abf9 100644
--- a/sci-chemistry/mopac7/metadata.xml
+++ b/sci-chemistry/mopac7/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/mpqc/Manifest b/sci-chemistry/mpqc/Manifest
index a3e4f501b1c8..0799e636a8f0 100644
--- a/sci-chemistry/mpqc/Manifest
+++ b/sci-chemistry/mpqc/Manifest
@@ -5,4 +5,4 @@ AUX mpqc-2.3.1-test-failure-hack.patch 543 BLAKE2B 77800cac8c280bd6ffc60153ad703
AUX mpqc-2.3.1-wformat-security.patch 2284 BLAKE2B c733b98618e611e93a6ed3939b47476c1c7bdb4275c19f4bbceae5ca28ccd0ee6da2c97fc0ab952d64ea5cb951cfbbfbc13b01b960c8ad7f9cb4973347b38f37 SHA512 22b30cc10f64ff96d027d2727643a3f3bfb08315f33996dfd8b9a28e0dcb9bee2d07cf1d8eead0df22be3117206737a52e350e7dfcfa07d381086610a6b94595
DIST mpqc-2.3.1.tar.bz2 2521392 BLAKE2B 0c2cd9ac2fe32791ab5f0226972b5f1376e5f0ed368e12f6e89f8ff44cb11e4e2cf150f24b3768eb119e94289aca989a5287fef9b51dbd67e2856e944b61c299 SHA512 34f24f72c6c0024e72d47c7fd17927ca2a88020b30d22a791954fbc933f67ed6dd6741ee8a80ddd4fdb007f1a357b5f5ea7fc284cab85474bf60e9f29aaaa747
EBUILD mpqc-2.3.1-r4.ebuild 2418 BLAKE2B 16a077d68bc41da4670cc19fcd404b7f73e3e07213c7e9f2baefacae27cda7fbf5b9bfeda90e256f5cae7648834a2dd15958fd44faa8ff7bf49b1d568691584d SHA512 41e91bcdc68613f53a712cb9235c3b0783f3d841395594c8f7bc90211cb80d30981b9d0c4290906cee52269e3486560576b5f09a836ccf5ccb96cc2bae7db512
-MISC metadata.xml 349 BLAKE2B a0ae0f532958bd0dd101b63a303db066c64197b45cc6b73521073e38c0bf52bef1209575e8232928aed14d541928b9ffa7f537c7723c3b14ed69cf3b09c49f17 SHA512 4cdfca1b779b107326bdc77fd120008a4daa7da9b93ed3f783e95637796545b95c04477786633856f3d3e1656339db042953d3b2644a18cc25a2b1dc91dc80c6
+MISC metadata.xml 350 BLAKE2B 80db75054e61001aead86d064ceef2aa81ac7d4ef1e7fbf93dedca3d4d97be524f102a79d8470bb061280e3c23960d1d69a2a7e8ba331838fc84798a38b2c6e4 SHA512 c384e54490c005cb8df298d07db4794d5ca72bb1766d072f91b8ac4d89f9e1fad83b8915c396591d2f67896f7a71821f9fd50fec6f8d45d2cdf46d2f69cf4b79
diff --git a/sci-chemistry/mpqc/metadata.xml b/sci-chemistry/mpqc/metadata.xml
index 2a8e4866597f..f010ff6d55a9 100644
--- a/sci-chemistry/mpqc/metadata.xml
+++ b/sci-chemistry/mpqc/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/msms-bin/Manifest b/sci-chemistry/msms-bin/Manifest
index f4893956b9dd..6beab2fdb1bc 100644
--- a/sci-chemistry/msms-bin/Manifest
+++ b/sci-chemistry/msms-bin/Manifest
@@ -1,4 +1,4 @@
DIST msms_i86Linux2_2.6.1.tar.gz 112762 BLAKE2B 8ceb55eef29234b38d631ea4aa63c7f11e4a606b8f14526412ed64d2ac9174604fd6ecb8c11c8e7629fd570b2298ee81d4f364c75ee64a41b1bc9fd9c661277b SHA512 814a5b5fa760b57c773f6900d42cacc5b68a2bf16d8792aa63cfa779aeabdab4e05064b86de6fb2551194543db925d83e07cf4ef74be8c08935ef5ecc8dcfe73
DIST msms_i86_64Linux2_2.6.1.tar.gz 593147 BLAKE2B b66430303f732bc66c62577950671a947c2a81efa139857a255522fa5dc73f042b571e7756e76246aaeac30cb8cf3ac7383645b35a70bb08a15572de1c5fb2af SHA512 630da1ae57b2d8d072247b650636a71e5ef6f07a245c8c4d07b26e20618d9c5dbaffcff563d0504b9b899ca263ba5f3458447f0e649bbfb895aea34305c1c8f8
EBUILD msms-bin-2.6.1-r1.ebuild 991 BLAKE2B 14f67e7f92cfaedd3bfcba2063527d482645355393014fc25d3db791d8aaf1069aaf073333f4dec7a72e17af2d03cd5456d6bdc4b46fec9722553f75fc9d3782 SHA512 4041d972a774eddc85932c34a3bad7766d1778ec4ad59690683be2ec2e1fa51f3b7c6d2f7c80182c56275b4798fe392310d73cd4c054c0b720f7aed918d85c3c
-MISC metadata.xml 342 BLAKE2B e5edc8e8d81d013be77e02718bb4fe50564226ec1c028daad92c3c5b882b2eb840be28ce78dfc83ab3a58e1a428b55caed99971b9b84a8bec23349952496eea1 SHA512 2dbd8b2bdf37d4a2d4127cb373db2c6ff8fc4de6bf294e4518f1d424115860c0b083d538935a8b1a54543b396b968985e46a7ca293367ee1a0b462d11639b7ab
+MISC metadata.xml 343 BLAKE2B f1858397cbbbbf350c8a3b5eb9c274bb97c576f316079684dd0ba936fccd126ff8a4de1cff3f7eb3391938d839d0f2a68ef08708906f8b4ffe4fedb653614e44 SHA512 2613d383a38898fd879618d9ac6c862b97b03f3f0c83f84102521b5f74cb0c2ec5f3e2e180ece3385918c7b7c021d90cd8904aadaa33a2583b17c0d35a69d826
diff --git a/sci-chemistry/msms-bin/metadata.xml b/sci-chemistry/msms-bin/metadata.xml
index ba21fec241dd..9a643a85e7bb 100644
--- a/sci-chemistry/msms-bin/metadata.xml
+++ b/sci-chemistry/msms-bin/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>alexxy@gentoo.org</email>
diff --git a/sci-chemistry/mustang/Manifest b/sci-chemistry/mustang/Manifest
index b94ffa43278d..22ec52c56e6f 100644
--- a/sci-chemistry/mustang/Manifest
+++ b/sci-chemistry/mustang/Manifest
@@ -1,4 +1,4 @@
AUX mustang-3.2.1-gcc-4.7.patch 286 BLAKE2B 93f16865b51cc5b510ac98a1f45bf02f0d0543c96df40ea54f9b33ce6905985760f201c6beda95dcaaa8a620f257c2d9dd448f315f5dee67dec1aae07d91b304 SHA512 7f2f113a28439c6646582ce154ccffea9df6a01254335a5915456609ecba2edaeefb9b16f02973624c3a046ae29865c2beb8eb6eb0c53d8209a56ea9f6946426
DIST mustang_v3.2.2.tgz 141940 BLAKE2B b90b42df782bd1dbdb387d0d0ab42430c5212b439da84f56a33ca2c746c8937ae330dfb8d634e7d1c5ffd0f6959cd9e4be0efe8f569c452930a3481894c68ec5 SHA512 cb862f860f3cdb3349743c6005a29acc14cde5269df9d61f1100ffdc9a22c1d8e3dd46771371557b823724e79783f8fcb7356c63c6f0c0a09aac09bee407a26d
EBUILD mustang-3.2.2.ebuild 1101 BLAKE2B 7d7cf0ac042e03bd199b4c23d2c24f9a3ad18b74a4e199c0748029c0238df4bb2389922fdb930d66a2896e47ca6a4350f3c753a7b77b85c198dc942219e0f0a9 SHA512 1b4229362d019bd73e6dc57da94d2a62fb034ebcb27ea2e53f3e5df96479224c8ffefdd0d4e5be57e6eab8014c485ca9cf85df092f244a2ca875cc913cbd62a1
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/mustang/metadata.xml b/sci-chemistry/mustang/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/mustang/metadata.xml
+++ b/sci-chemistry/mustang/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/namd/Manifest b/sci-chemistry/namd/Manifest
index fe6cf97f6233..4d348875c0d2 100644
--- a/sci-chemistry/namd/Manifest
+++ b/sci-chemistry/namd/Manifest
@@ -2,4 +2,4 @@ AUX namd-2.10-gentoo.patch 4637 BLAKE2B 0439e424f3d2a73378c68052f9d9dd69dc9590b9
AUX namd-2.7-iml-dec.patch 520 BLAKE2B c16430d1161b9d7e3faf22257d84ff1090eccf906a296f91d4ec0731fa89d23334d5c39c7988f8ac6d5f5020d403d4491dadbe34b1e9800ada81ad18b2448b7d SHA512 50ddf91bcb0e370a98d6fe5329f00ec9a8016f0178e342b086f4b9d4130a41e525ed9d960e92dc83b4372f135ce9d454bef836d3e215fb6ac7933999278efa37
DIST NAMD_2.10_Source.tar.gz 9200234 BLAKE2B fe348a21309b279640da81ed4dd5447c1e6e467866270dc1730b26d02d5518b45bd662211c3cbe228bd8d9885edb062cf5d245d634bcd38773c36873febd2ee6 SHA512 3712a03841fad76c502ac4e41469162ff78e6152560d0f6855d61d2b5583241a661e2a3e7446029b56a6f6f1100f25cb51b2c3df6571542397961d3bb625bc92
EBUILD namd-2.10.ebuild 2644 BLAKE2B 6d91c9f7f90f2b304c18bb176e7fdfcfff98a077bf8d6ed720b24ee186b5dece164fde49cee6db3f3dff217a53bba76d6d1c00b45ca7633ab1d9fb2a0b53ef46 SHA512 816bc445d23cc15fcf7d17bacb11b7ae4566a7bf135a88f80b7587d9630db0650e0f8b54b828bbbe8454008b6967fc276fbfc347cda351ec4b9e370d08671e08
-MISC metadata.xml 376 BLAKE2B 04d5215096c154f2414dc0475c6510a66b6978bd85169311d4b17303bafea893f8e3c2afb83080d72492c5dc82a62b2522ca079e300c917c00e439da932fee68 SHA512 578a3221496eb1470d9fcac9e784f62bb39591448a35a24e1881b5be69473689770bbc928c5779b76bed8c657b1e44d929093e6a39812d135199e37a0e8938e2
+MISC metadata.xml 377 BLAKE2B 727b1c499d11b56228aab0bb2c47c45f63c48a1406f52b5b3d3fe8d02b69d0113dbad00eca99bcff194fc164605b2b698bdd8581c20fb6401c54169265d73f6b SHA512 4dbe460b1b9a0a8112d7866a11a389a1e2847afa3404c57479bdf39e6b3600d403c5c1f70d76196cd1508770dcd8befcc73687969b6853ff1e5f25cf5d22fea7
diff --git a/sci-chemistry/namd/metadata.xml b/sci-chemistry/namd/metadata.xml
index 2fe5325ae7fa..11bbcb9bf2c8 100644
--- a/sci-chemistry/namd/metadata.xml
+++ b/sci-chemistry/namd/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>nicolasbock@gentoo.org</email>
diff --git a/sci-chemistry/nmrglue/Manifest b/sci-chemistry/nmrglue/Manifest
index e93e51c2ce5e..727c90a189fd 100644
--- a/sci-chemistry/nmrglue/Manifest
+++ b/sci-chemistry/nmrglue/Manifest
@@ -1,3 +1,3 @@
DIST nmrglue-0.7.tar.gz 166596 BLAKE2B 769dbe1330a2b610393cea07edcb7c997d219038ead0330e442b491b84a51f3d1ac0dd22a9399b1af2f97fbfbf0d24316bd834d71804b4607209c5d11f24939e SHA512 4d9959d151954f38efc7ea4f93539970bc75098403b0b5575f0c4ff6c2c25c1f08e207d2dee281109ffb2bdea53f2e7beb04e251cec1f638712dfe38430c23d5
EBUILD nmrglue-0.7.ebuild 596 BLAKE2B b6259e5773b6b57d174937605a0eb96dbc902d240c941526e4fffc62b8a31b2eef165fac6b262ad56bb1649ce22f2e7455a81f0673597da8779576a3e83a6bfb SHA512 c6291e9966e67df4d053d6029c7452bdef69106053ad55aa83e033a76cc3dbb2d6c98a8a6d08a4e038d1d2b339e941cf540f29c279f43a69946a513e60052067
-MISC metadata.xml 1338 BLAKE2B 480651ef6112e93e3c70e734f4ca7d7b24653109f503fab6a340c9dc246b881b5ab103b90f8ffbc92a6d5352b399c15a33072292e549b4ffcc2689f049996cfd SHA512 7defa016b2c5f51327f282ef8dbb5f99767e554112baf10d72a6c86462d86bf7bd3129226340bbdb00f9e95b2349fc3594b6d0d8cd0175457bbb5f034e31aa7c
+MISC metadata.xml 1339 BLAKE2B 629b015245457db2ca3d5c8ee1a6a21393a312130e2fafc352531dddd281025bc59cde411275eba0a5620ac8e33cc365c223f1a7bf598b3111335aea9020c1d0 SHA512 24b469373599ff8b4b211e566be408fc629f6e6b55d0c6ef6a4a3c7e722da6fa499dd373b771682db23795cc5ba75e155eaa4c5bae98d030907af60ec57689e8
diff --git a/sci-chemistry/nmrglue/metadata.xml b/sci-chemistry/nmrglue/metadata.xml
index 55fa34fcbc44..71d8eb79fc18 100644
--- a/sci-chemistry/nmrglue/metadata.xml
+++ b/sci-chemistry/nmrglue/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/numbat/Manifest b/sci-chemistry/numbat/Manifest
index 5d9c9b80e2eb..52761be094e4 100644
--- a/sci-chemistry/numbat/Manifest
+++ b/sci-chemistry/numbat/Manifest
@@ -1,4 +1,4 @@
AUX numbat-0.999-gnuplot.patch 2048 BLAKE2B 662ff2337d8a56ba21d1037911dab787ce3faead57a692310e694be4435875c1c7b66a6b756b28c2a2bd8ee29c29b845b794c6f70720c9f7b31810cd8296a083 SHA512 dd646e8f6652a63cb4e1c97830a755629e45d20fa13431f628b66fe8a5062b7bd7ebacddb3dbcca5aeeac3ae0d89f59c61036c1a3639d25fe0426ada77a888bb
DIST Numbat-0.999.tar.gz 1791471 BLAKE2B 7f6536533fdf6bc3860dc1a7c03ade4896e782c5ecadf1c6a7d70896f4c6ef9f0571796c171012497d7b47b3342c215a5302ed210d7dde3ecdbef170c3f55dbc SHA512 0887f77905bbb476b0d12a7015d5d5745023740acc974ea9cd452de7d38a75a92e6090015127588b38ba62353d38c2be20f57be5df3011b51050c4934dfd206c
EBUILD numbat-0.999-r2.ebuild 1007 BLAKE2B e65d5f9eb640f0f9f87a928b63b61e21f1944f7f57799dd98459749fe503ec5812a8190bed700f2747325220f3a54d935f16200adf5177180ceb11eab5c971a2 SHA512 f9f92be8144897cc537d218a944b88a98c240933153b7d1e2a5ba16e8657fe3cdc8b4dac2eaf33b411c8849e0dfbe6036898b59dc4fc81544041062bd0a29cde
-MISC metadata.xml 852 BLAKE2B 623b64ec229e39a4def8e03c4b69e6268abb2a42f7d2337e71d17da183a0ac99b953e820c2875703dfb5a599229ec94cea9f40a4386563acadb5082a835ff186 SHA512 64e5552a677fc7370f68f7f811734ac17144fcb95e23503c962b678a1678dccf22a2d19991eb69dcdf8d4c1c97448d35d7f34654245ebe3fee8b30a0a8fa586c
+MISC metadata.xml 853 BLAKE2B 2ab072c2f2afc1af3d37ddd39e7cfb38bc2b88b962e30889392add26ce34805262c7cc317a2b22f23550c15916f9ea012f2e65fec31c8a5d62828351e510a00e SHA512 b08a5455fc22e7da72cf7122238356059d12746a18c8704e35de8b4485e3e3c1b6d3fb7601b5c7698494189d7763357fdcd3225c5694d3313b597dfd11c18892
diff --git a/sci-chemistry/numbat/metadata.xml b/sci-chemistry/numbat/metadata.xml
index 0f4399d7df6d..273753c203e5 100644
--- a/sci-chemistry/numbat/metadata.xml
+++ b/sci-chemistry/numbat/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/openbabel-perl/Manifest b/sci-chemistry/openbabel-perl/Manifest
index 079b42b9f50f..fb62a44827f6 100644
--- a/sci-chemistry/openbabel-perl/Manifest
+++ b/sci-chemistry/openbabel-perl/Manifest
@@ -1,4 +1,4 @@
AUX openbabel-perl-2.3.2-gcc-6_and_7-backport.patch 635 BLAKE2B 4e98dedd149b14d5bb02fb6d2fa03e07242d100c7b41f36f749ff3d587080eeca44aa26ca095d31e0309e45f3780b67deaa97f1177ed35a9b7407bd7c33f78ff SHA512 e1b4402f34d01ced5b4caaa184b4e5544cf47893cfe7958054052b05a57dc34b4d44239a212c7d909f29b9366b83b6df74993f844a20f23748c01272ec093081
DIST openbabel-2.4.1.tar.gz 11618304 BLAKE2B 8fc051e83add9be6456e281a109bd6bbec282a64ffc83309819f0decbf167b4914fbb7f1966e95e103f268754045b804317f51c79a952ace707c6af2bd320125 SHA512 427e678f0a911bd27b9a8a05e60b6e09f113be4e5dd180daaf80c28d06368e52b57501261755ab3817a8d31f2754db24471fd0ceee706d029386d6f70800e9c6
EBUILD openbabel-perl-2.4.1.ebuild 1583 BLAKE2B 233459caeea67df903f80dff500cce8fc1e4a99cc13124d8cee60fecd59261979c62ee0f5072f955d2c95043722c98450ad27187f7d0443c8ecc4a27f4c9ffee SHA512 6336a34a6d5dca6d573a62276cccf34cee37e95c31704f52a178366910d5267353b49fb981c1dce07ea935cac0e7887aad60df77468f7d4838ca18b901998651
-MISC metadata.xml 735 BLAKE2B de3dbec049667c35b29293f9c27e81b0e0ffade4c57ffa519c013c788409f310dac834fd92f0d72c05281bf76317b3c7fc2b429b8644a7d350020caf425185c0 SHA512 62052b0e677a52adba98961185e5b83525c652e260ebad1b820ed19b071a1f6476cca550ec0c570a5faf0cbad7189cadb78ac8d6de077fbf15e346b7c66e4cf7
+MISC metadata.xml 736 BLAKE2B d5039a999403b341b01d33f9791afacebc5aaf9ae66ae49b39c5933e92ca0d0bbfcc556d0e6c86de4574bfcc3cac273ecd00a75297969d9a95ea0badb0c561c9 SHA512 f83097e7a6ba608939b69248b23f72a4eeb8f32b01a52588a27265627bdb251cbc27e6188e9376041dffebc51cfb664acca11cbfca0018bde7208c374794ed49
diff --git a/sci-chemistry/openbabel-perl/metadata.xml b/sci-chemistry/openbabel-perl/metadata.xml
index e549fb694ab7..74da65eec81e 100644
--- a/sci-chemistry/openbabel-perl/metadata.xml
+++ b/sci-chemistry/openbabel-perl/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/openbabel/Manifest b/sci-chemistry/openbabel/Manifest
index c030e3c66b6c..99d16485bdab 100644
--- a/sci-chemistry/openbabel/Manifest
+++ b/sci-chemistry/openbabel/Manifest
@@ -5,4 +5,4 @@ DIST openbabel-2.4.1.tar.gz 11618304 BLAKE2B 8fc051e83add9be6456e281a109bd6bbec2
DIST openbabel.png 29060 BLAKE2B 8d217d92125cc73462437411dd4e0cc05179cb0934f5ed15a307acc6b549b8ebab250a48a05ef7657f48c6df394f37da9b659de61efb1477b79b573a5b393ad3 SHA512 bbcaaa37663b526c9038ccb9edaf05ccc3ad1a861739a737f05f363098d8402a10b36e341fcc0aca636e809c6c32db99bf987b41719a0c756bf5e31444d3eb70
EBUILD openbabel-2.4.1-r1.ebuild 2226 BLAKE2B 1342b61d567112528a5d574e0529837d96b53e98ca96a71b05336079f2caf7489b74cf98a83d15d884f19ed24090f1284313cd1b5df552f6482fe6dfa045a40d SHA512 1566ba69f27e97acfbb2950b65844987dc9a21410f42d540e0e3a6c732c151395b80cc6fa371b70414ffcc5b61c445efb6f893653b2b5d353579c73f6804f247
EBUILD openbabel-2.4.1-r2.ebuild 2178 BLAKE2B fd0d324a28dac54a6b67359b9250ab4331195eeb32c10de46d9d5d4e5c4bce44298eb0953eb06006823b7c6bdc5ab0b7f22b0b3334800e2f06d080a3e24fe311 SHA512 494acf7a358eb01a8bc77713da9135195013833c8bc993adad25221715238e53309719c0e42bdcd8ee076d35b26228946cfad5e08aab3259119db741c27ae5bd
-MISC metadata.xml 665 BLAKE2B 4657b85c826c006b6d69e06240dd908a72397a32cb0c0512810e22d1b02478eaa3ab460535b300eba653a334a79c81a102007da1a901d6d1dbd04fc5e795df73 SHA512 0555e7c7401dfd5fbeee339302f8eb7a104ad6538db2839d8e89c20ac5ad2184070335677671a58eb91be2780ae485467d33302f3a14d0caab4ae8c0148f03bb
+MISC metadata.xml 666 BLAKE2B 717970113d4ce316eb1d4504a9b3f2e8137edad184e6f6f8d169d9c45ae781048ecb13c6e3bfcd334480cfb67ccc8055e1f34a22f706a3a3ccd19dda3538d143 SHA512 ae12c4813154b6571eddad77e7da986f2c341b32bc3ebcf13e63cf058ffac5cabc458ce8dd3d1bf761453ef7936260a07aaec7f50fe46c2b710b92e8833d7b96
diff --git a/sci-chemistry/openbabel/metadata.xml b/sci-chemistry/openbabel/metadata.xml
index 245451297cd9..88ffa5eb106b 100644
--- a/sci-chemistry/openbabel/metadata.xml
+++ b/sci-chemistry/openbabel/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/pdbcat/Manifest b/sci-chemistry/pdbcat/Manifest
index be13a5cb1d37..59a153f5d9a6 100644
--- a/sci-chemistry/pdbcat/Manifest
+++ b/sci-chemistry/pdbcat/Manifest
@@ -2,4 +2,4 @@ AUX CMakeLists.txt 172 BLAKE2B 465647d1cff64bf52a75f35e9783bf7f9b80f214e0e950edb
AUX pdbcat-1.3-gcc.patch 423 BLAKE2B 513fc1d200eb1abc4103e813f5b8a666c7cbb20d97c7da5381edbe33a75353b6b17659593196ee7be0197ac08546705901f02be77d733bfe68eaae5cdbc0d2fd SHA512 0a4b85ad2a4ec8014829e0c1449aecc90d65b57c4d0062ecd537991219c58c75dce138d901718a790c014d240afa9a063d46db5625d1e1c50727f1b1e468b032
DIST pdbcat-1.3.tar.gz 12750 BLAKE2B 45a229af85665bcdc82d8407eab69e2a3827988202401a2d1c5201647ececc76d4c5c908e001305fcb12b5dc0f5788989aa3fb87840711c9970db571c3bd263d SHA512 369ac0c4c1d8396eaa0450feb9852d2d75ebd9862a2e403ccd42a2801e924f99c28c5d71c0b66feb4588076a8948b503823d2c75420128dd04d020253f821f4c
EBUILD pdbcat-1.3.ebuild 590 BLAKE2B 940de99c7bc5eca8d12866afe3eea8300b2635a9b835135583c09ba59c1b2036505f5c48482d1714507a9032957e10498cf81997b989132505f9f94894415be8 SHA512 d9a9734e6df0dd3773fab52b617a1dd6dff2aeaf3110903ba3af5d11644db1b14013371ba020bdae412c311648f72f955c358bd995c2ef2df659984ab6090077
-MISC metadata.xml 1145 BLAKE2B c1b35dd2b009bf523301d07a0652514e02d721ddf1d440172b5c6d21887f4ef99917e828c88f2b98f01d0eb990f67837a0991e444a1069dbe0999d0a8e0ebedd SHA512 4f4711173cdae81767ed2519c158fba751764b62f936d91a53ec0f275b6a52a9fc72c4dc4f6fa942376d81e741952c2e5c777465d520f2158b0bb125ba1b7ff0
+MISC metadata.xml 1146 BLAKE2B 5111c6f43451b97682372f3cab46e82d8d07411c5ad8da3295aaf4fe36d1303672e4902d0854e9911188a3b44ecb989da39f6650be04633868b7e97783ffea65 SHA512 4c757ff166a83fe0dc2785800de45fea3cb6eb631facff0f87c4ca1c13085eb3984e2f38b2319471169461b01e6260d6f5c87af18e4c407fea35b38899905e99
diff --git a/sci-chemistry/pdbcat/metadata.xml b/sci-chemistry/pdbcat/metadata.xml
index 29177ef0643c..ad3b3d086c24 100644
--- a/sci-chemistry/pdbcat/metadata.xml
+++ b/sci-chemistry/pdbcat/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/pdbcns/Manifest b/sci-chemistry/pdbcns/Manifest
index 859d0c72ffb0..5b316c9b9a00 100644
--- a/sci-chemistry/pdbcns/Manifest
+++ b/sci-chemistry/pdbcns/Manifest
@@ -1,3 +1,3 @@
DIST pdbcns.2.0.010504.perl.tgz 6806 BLAKE2B a7501b818c7b32f9116a3407234f2ceb39602032a47338772dc7bdf146f4b829091da4caba40045118f52e562f5b62fc270525fc880f80bf0bee50cd7ad4fe88 SHA512 5174cb51dbe3ead405fa1005d81a7ee063bf4be4268b0e728f1ca0aa3e6cbc005fb0bac3e21e06f872c6f4d42c23f50b6e6130391e3b825260c890070e6f766b
EBUILD pdbcns-2.0.010504.ebuild 650 BLAKE2B f830c0f90504a009d3123845003e567b05a2ad151b24f01216464cc0cc4740fdc64bdf23c3583c9c55090c74e0e892134c56917d1a6774e350ee6a0165a0c1f8 SHA512 376da16e7be6a668e9230e1e8e79bd2b4f7452b5d5f47e6038ee4efb499902d31ed3b3ad9daf280828ffe4f01a4359059421f2cf3d5b51b47829ccdc5083c154
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/pdbcns/metadata.xml b/sci-chemistry/pdbcns/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/pdbcns/metadata.xml
+++ b/sci-chemistry/pdbcns/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/pdbmat/Manifest b/sci-chemistry/pdbmat/Manifest
index 67b00f70ca34..d57f17b0d3ea 100644
--- a/sci-chemistry/pdbmat/Manifest
+++ b/sci-chemistry/pdbmat/Manifest
@@ -1,4 +1,4 @@
AUX CMakeLists.txt 414 BLAKE2B bdc6bbe4b5fc80e208dece51e29f3d7b429655d57e0406c5d08fd41b069577574f0cb1b75b406a21aed14479bc7679a386e92a6af66dbdac325291ef6414dbbe SHA512 d539a6cc947cf6f16d634ccc5e2c0f1783f000564cc78c2103c1bcbc8619cb7f0d97a461ffa91ab3fb7d4dbe11102614983456c9bd8597a2f4d9f9a6538185ff
DIST pdbmat-3.89.tar.gz 124727 BLAKE2B ed74b4278d85d21f97a6268f2554478e5da0c871be6d071d54edf964b10f92518f1869a77a6718e2c2b6b8c61b8e4659ccb84f9ee829d4351f23abd727c113cf SHA512 2c7f8f32344fe1abc662878c2556c10bd6671e683787231827399866f485389c3a63253b00d5a5bdbe8d0b8b779891e846962c9372d927b94c45f0fac59a4fb6
EBUILD pdbmat-3.89.ebuild 649 BLAKE2B 4ca393b9d4ac572b263f7f16a8d3bafe4710cad3630bd4617c7f184e01c56c1e2dfded7d14f2e5a95e0432178c3acebd9fa0a4cf2a48ab4abfb47c00f12296db SHA512 22e5765e35daab42e8c013ee1a2ddc8b08318d215c1eea6def16ff0559be4f5d521ed85f73fc82fbac3d0a0ae06fc07935bb666fdccf47f1268316a668b1f3e7
-MISC metadata.xml 1091 BLAKE2B 7f5cfa30f1a92cf559d042099f1a097ced4082087a0d30d8c9a16d96aa4aefe2d8006811b892e0e2a199674ceff3f8c84dffbf29161de91a67e4af75b51c24d5 SHA512 1316419ffe8d75ae6596e456563f2a8eec3b734cc4e54c0b6708adf71ac355dae4ee1934ff1f7e44071e70f3c1b3796cb51b144d84fdd8367cac2ca8d3f70542
+MISC metadata.xml 1092 BLAKE2B 4dd0c655057ada7c10630baaab4c9e83c3617b57ccb05367db0b90362c3473b18b8cc7fb3daf3ce0bbcd513c364db7f8f3102a73bf111632b3f79567bc755788 SHA512 7d07b337f08658ef9fbdda6392a8b49ca77139e1d52136d74f4ce627a5fe1062fa52b33ae94eb6273ac7a4511c6c74da21549f9e6d46b3e49c6f4fbfe83aebe4
diff --git a/sci-chemistry/pdbmat/metadata.xml b/sci-chemistry/pdbmat/metadata.xml
index 5116112c89eb..3186389b9279 100644
--- a/sci-chemistry/pdbmat/metadata.xml
+++ b/sci-chemistry/pdbmat/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/povscript+/Manifest b/sci-chemistry/povscript+/Manifest
index 8f4bc1240300..c32b1a378566 100644
--- a/sci-chemistry/povscript+/Manifest
+++ b/sci-chemistry/povscript+/Manifest
@@ -1,4 +1,4 @@
AUX povscript+-2.1.2.2.19-libpng15.patch 542 BLAKE2B 1fcc229fd3e90a1c567ea42bd87b4b9de281b4976016a0c990f3a66ba2d9d3d8b7eacb80c1caf31326a4c35ff33863d9495b857163ee86bf7060e44debbe19f6 SHA512 5f795238f95adfa0712c92afda669d461cc292b358aa51907ceea1c2d5e5e470d1817d75f461a46efb962ffefafa2606400d32c1f681192f8e161d6e23ee5224
DIST molscript-2.1.2pov2.20.tar.gz 822930 BLAKE2B da050db5124d04e7c0e2c06b0e666d631f214b4519b41ac4b4775dbdbf5be2608f5417f13fad45c36f796d486a8d9211d2fd3d9403afa1b6d27e52b4f0a7f248 SHA512 f7cae4d9b583a05962742ee36ec717f0ecac6bb88086bcfa484b51b0d2e16a15920bc7c09d9d777453d7ef7b81be444924d15a889e4725bfca7bf517d4e52db2
EBUILD povscript+-2.1.2.2.20.ebuild 1260 BLAKE2B e87e2245fe685e882b8c4d794933a89fbcfb7a2d276f6153f89344e7cc79a240df6a76a27d27e02bea9408f1c88afc2ae79bf980a36f63d6e74a25641dd13e26 SHA512 e47e4402bcf2debf0b539db25971b068a7ca9253adebfdf84788d2aa0e0a12b44afa94e3dcff5559c906c480f98216c0ec211f59dcd0873382ac49ac0c2737b7
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/povscript+/metadata.xml b/sci-chemistry/povscript+/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/povscript+/metadata.xml
+++ b/sci-chemistry/povscript+/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/prekin/Manifest b/sci-chemistry/prekin/Manifest
index c08768e2c0fb..3dfe32071e2d 100644
--- a/sci-chemistry/prekin/Manifest
+++ b/sci-chemistry/prekin/Manifest
@@ -3,4 +3,4 @@ AUX 6.51.081122-overflow.patch 1097 BLAKE2B 86ca19e5f7a69fc1f92b0cfb4c8b90133f83
AUX prekin-6.51.081122-fno-common.patch 878 BLAKE2B 36e979d8850cf82e1cae475bfa488c2063c62bcf67d57831701381256000f5e4b8925a408d31e6a8c7c1a5e036a2507ce93b5d8bf850457a17ab22788e1803bb SHA512 8e46242b91981b96d4964a1c3d657e71d34d1ef118994e5075dd4eb238dc68809ab8dbd8fe328bfb72fe6bcc5701261cac75f57c970b4655306e58b345705855
DIST prekin.6.51.081122.src.tgz 350756 BLAKE2B 657706e83d06be74f2565abb4db1c886c19247b736200cf309cc143f71c7f47e4c85d869b286ec3e250ecb0d714e1454044836001aa6b883513d9149683bb320 SHA512 9a41f30a9de955c78ee5685807482b2b073705643cceb53bf57eaf7c0c4753dc88fa8dc19f09d4c8a07124c3c3c73716f29126860ae37ff4dd6fb6178b829d1f
EBUILD prekin-6.51.081122-r1.ebuild 970 BLAKE2B 06ad6cd657cbf747e650b4b1244c675d3ad61f3f28a4a6ca576d105b38bcd2b65cc2ea5443de85d76d111370b72be466216f2a7b474bdf6c4d1acc619da929e1 SHA512 04027d1533809555de1cf2842c31b7c75eab8a6e73ccd971ee54d48d056623a87b8f9850adb7fd515e34e0e51624ad2f95d4be187ee04e34ca4d7f8aa36221e9
-MISC metadata.xml 261 BLAKE2B 509ce9958149f9cd522a2c68dd0d23ed851d19d02494611456592897093378d180a6006cddf1575fd60106119e72726255c49db2e10fde1b370bdf2f3cf8c94a SHA512 72682d17ec2b918131b551bd1ff41004965d3cf0c00d24222b34741d2eabf601cf36d4266be70ba7fb7bd0ab55d9dcb5b8e4ca41125bc31f176516797459c8c7
+MISC metadata.xml 262 BLAKE2B b7b95793a5c170b7f4be71ed1ae2a6c586e04f52fd8695ac7fdd847f1ad02c28889a81ccac03973e7b7bbfdf631b6a93cfefcaa4c876d455da566fb5056bea38 SHA512 b917961961d723c21d2c0ad186d027867dc9916433d331f6d0733870855ecfa22065ed67df63f71f022a28f4ea3e96334d0dd6463025b6d3dcd999b66b712fa8
diff --git a/sci-chemistry/prekin/metadata.xml b/sci-chemistry/prekin/metadata.xml
index 4ac68c154bb0..b71795dbfba5 100644
--- a/sci-chemistry/prekin/metadata.xml
+++ b/sci-chemistry/prekin/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/probe/Manifest b/sci-chemistry/probe/Manifest
index 15d0fff6d4e3..abad0a41e268 100644
--- a/sci-chemistry/probe/Manifest
+++ b/sci-chemistry/probe/Manifest
@@ -2,4 +2,4 @@ AUX as-needed.patch 594 BLAKE2B dc558fa12441780347e1d751ed7a32a8030d5c3cfcc8b7c9
AUX probe-2.13.110909-as-needed.patch 634 BLAKE2B 91848bcef2330e1f394c7c21388db1b761facefe73cbd0e244636e5b899f032463b9e643f2a48d84d028973695f1ef9359137aae8e65290a9f3bbe24f6dae204 SHA512 24b291cffbc00588626ac9da3e38e9bbb9a9ba121a3ae74fa5e91c94cd30489d61a559351d5a4b89ebb4c1564be30144d1eec295032ed612fa6e80d47d9ba8a6
DIST probe.2.13.110909.src.zip 131063 BLAKE2B da2cc9f43c96043b4cba0c628856e32aa7d5d9ca49d58d4e3f02c8d3aa106955d562c6212240d3d977940fc7301ce2bd27c86915517d5e5a313e5a7e459479ca SHA512 5efa066873d0e139da66bf8edb541fe42df94e99cab171ad8d06a8a6f5caada982ef5b18481e748b224dbed86f63c99237d04ecd107c82855b44de91fb6d2b16
EBUILD probe-2.13.110909.ebuild 646 BLAKE2B 7bf4821223ea32aabc31e37026f9421aeba42cbd555d4948bb057b267684cb8f3f234ad000ba3f02fe34610fc4ffdb241f2e5f1c2d8d6509ac93a9ff7c456a30 SHA512 f806e1b7a0e8b0e2abb25e0dfd546563d963ba612667f60bcbfa049c2d0e169987093eccda5efb95db9ed71e3a6da8bcd10210aefe4d78682ca5cbd48ba433f4
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/probe/metadata.xml b/sci-chemistry/probe/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/probe/metadata.xml
+++ b/sci-chemistry/probe/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/procheck/Manifest b/sci-chemistry/procheck/Manifest
index b75562cce9bf..8aab122d4060 100644
--- a/sci-chemistry/procheck/Manifest
+++ b/sci-chemistry/procheck/Manifest
@@ -4,4 +4,4 @@ DIST procheck-3.5.4-README 6585 BLAKE2B c61606848f30728b67d2ab51e0beadec1c30aaa0
DIST procheck-3.5.4-manual.tar.gz 517840 BLAKE2B 33c5da5888bcd263e900cf2839f9287373e032fdde234e0375af061ec1c588d1ea5d2718da2a050da8060ba4003748a8fef3ff35b22f424c1cf6a1892aec0fe6 SHA512 0fa9c7d50b7ca43c626d5261c524166938d3a92be1d02221721bc7ce7e91ac4919e7200b946ce563f9bb696d7dab9588c1d1b31a4d551cafa2f2bce4931a212c
DIST procheck-3.5.4.tar.gz 522013 BLAKE2B be6764bc741ec3f868aee349fc7e23608c612758029d0b745c421f40b47c896dd48de84ee7df6d09a64a20695bd5a1ed0a96464e6dcaf44de03da1ae231787f8 SHA512 1dd78b53070484fbcdca51001fd147ab13fd5e51b3d1da54fd529531917c31012393751ee514f0c79d579b17a1701dde04f81b1c9ac27b2b835a43fa96785ecc
EBUILD procheck-3.5.4-r3.ebuild 1712 BLAKE2B bedc72cd6d9d6ea15e488ace793c20ef87cabdcb2ed4e0379c46e97a582e218ccf2ed35e735e431bd824f2ba06e007c587bec41ae409f5b77cc9bd0cf8263a2c SHA512 037c6c6e86a471de8e6388c3934fad98d21e4b4615b9933aaf4051605be54268cbac45f932a4c19d802fda836cd4c921c0eb8d5ee0e6274c5a16bb3178e5756f
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/procheck/metadata.xml b/sci-chemistry/procheck/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/procheck/metadata.xml
+++ b/sci-chemistry/procheck/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/propka/Manifest b/sci-chemistry/propka/Manifest
index c84a62817835..229189a824af 100644
--- a/sci-chemistry/propka/Manifest
+++ b/sci-chemistry/propka/Manifest
@@ -1,3 +1,3 @@
DIST propka-3.2.0.tar.gz 73746 BLAKE2B f79e493d5a195b81dc5d11cc21b9ab16c8d1fa48f15f7e23e2b2936dfb8634fdb00c7838b8dbdb4a68726dab0f16e54522ad71d71b3273ac93c03a737ae06f04 SHA512 98f2240b28b33bab94cdbe9392062bb7f6b87e75b94c2af91e178f874a74d210601161ebc835c4d751b89d37b32348fdfb096e28cbf8e9237b3f472d3fb6b4fc
EBUILD propka-3.2.0.ebuild 848 BLAKE2B 3f48d2b0f6b17916f2a9b9baf2d11b0d40beb24498190408320b2e11226aacc81a45a0600506905d03b8f99d33663d461e7eeaaf6f4d2bf5e66f724fde910125 SHA512 5b84c1a85d41570d6704bf87b04f465d50a7e8b4f43fc450c37c4bd558b188d85b56b3073c2bdc750ea8607a2946cb3210ba8bbed8e8bde83db19d0b3109d7a6
-MISC metadata.xml 392 BLAKE2B 0fdf293dc124a506ef9ee8e62b130819cc507b3c993d011914b6d691d823f00df82633e7499c3d22d18c3b927863ed654f924fb44731cad20178ede798bf9c52 SHA512 7aa53fe4d5b5b672748833e0e2afa7a6fe367289325ae6673db71d0d964b4e5d1df35b5ff7557e10e87599e8744d51892a8bff73f9ffe2cea57b6e11ad2d61fb
+MISC metadata.xml 393 BLAKE2B 1dc3ea512fd9d486051d6a077044cf93f52e831fd99a9fc0c11fc1dcda1360840083d3249ffc1a32cb88425788cd01914084c4cda408912886a2513096929ad8 SHA512 8cb283b09189ce9d8532388a7ed12465befb64a0c095bd6eaab451c54915d89839aa6056cd770950714a4c8e2dc40f6579da0ab06091b7b4bc3bb25119095e7d
diff --git a/sci-chemistry/propka/metadata.xml b/sci-chemistry/propka/metadata.xml
index 6bfad85b4001..03810a218076 100644
--- a/sci-chemistry/propka/metadata.xml
+++ b/sci-chemistry/propka/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/psi/Manifest b/sci-chemistry/psi/Manifest
index 0c5f9217f3d5..a00e8dda54ea 100644
--- a/sci-chemistry/psi/Manifest
+++ b/sci-chemistry/psi/Manifest
@@ -11,4 +11,4 @@ AUX psi-3.4.0-perl-File-Temp.patch 488 BLAKE2B 03c5ab1f1b801321063f389e3ae998906
AUX use-external-libint.patch 1359 BLAKE2B 24fe9d7eb369f6c6846915cd87471d4f2bcf66da09105d73c4b75cebfa7138d318d5dfca653368d80eb5b39a31eabde60da5b439786ed00d95b31b90e56a44ed SHA512 8b4749b0c449dbc89067eec466d3d557da86e7f2d950cc0a94409e158a31a3fb8ceafefd090168acd97975ff3ccc7859e6f2df3c2cd57a3571b79f71aca6fff7
DIST psi-3.4.0.tar.gz 7413072 BLAKE2B de8b5e0fb1692780446385bf13f6b9984f5be8d441730babacf6f59dd18be6e13b1cff17170cec87def1f743d7e634354b57afbc046e6f34c79c9fc52c31b146 SHA512 b13d2464502545cceec3a3b6048b505b918da26730c1614617b04ee6c1d637c9f799ef7fd92ad9554fa2db87617004aa810a6a81400a04df3c06787d51654ca6
EBUILD psi-3.4.0-r2.ebuild 1956 BLAKE2B 91bbce5403d860bda96c14d6ca219bf52ace394b2bc1f3861ca6089bbe0e4cdad85432beb692da990fdcbecc59f174935f8a1100790cf087d863719c0a29155a SHA512 1474c58bd5ac950fecbfcddd8ecc09315f54efa42c2e0ef07054e806f47027bfcaa15e864d9d689147fc9f5cceb41f3af6ef961a1d8bbc7d2216db36a823a193
-MISC metadata.xml 352 BLAKE2B a7c80467e6e67207a2a03e98071d1bbcec5024a528848f615ab38233c888a78032a9fe7a04dbf278964f9f9cb52d010ad592b1fe40436cb7839a1f2bfd4a375a SHA512 0ef2b193bcadef21bcad1e3fd3745b37f75bd65fe44645c667c99634d9047b28c82504002ed6967cf1cc2d5c8c43f5757ad08264613088ca36c7e94ac683b7e2
+MISC metadata.xml 353 BLAKE2B 4205c6e944b90033531f13b347ceb80f0f4410993e400fafddce2501f73048f005ae73614bfdc10c41ff7655c4ce36bee084167ed984a5818ca050ab3be73fbf SHA512 9ccb40364500c7eb60dd1edb4551ed0e58cde5c4b52b184b0b0bfcf76957daeed1d098c7a04066011bf255ec869ba39316a875806329f2d4ec375955d69de5a5
diff --git a/sci-chemistry/psi/metadata.xml b/sci-chemistry/psi/metadata.xml
index e18109f21fcd..34f6bdcc5379 100644
--- a/sci-chemistry/psi/metadata.xml
+++ b/sci-chemistry/psi/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/pymol/Manifest b/sci-chemistry/pymol/Manifest
index b87dd02aeb4c..89ea6a33ac66 100644
--- a/sci-chemistry/pymol/Manifest
+++ b/sci-chemistry/pymol/Manifest
@@ -4,4 +4,4 @@ DIST pymol-2.4.0.tar.gz 10552539 BLAKE2B 34e31dce99c1e838b00389c3d7c29657534dd03
DIST pymol-2.5.0.tar.gz 10470268 BLAKE2B ad3721432001053be93afe755f531ae47348213b042e84dae33cd79580428c9ac3d00629afa0222e4081807dc80e2dd69c3963a457666b5975b6263b988d02d9 SHA512 19f21b8f735fda5314abf202d56f3c81c7251bf6ef0df73ccee534d9c08035f4ef6155ffb68e09d7717a0fb5ba7289bbfa440691bea4cec0de7199c9e858ea91
EBUILD pymol-2.4.0-r1.ebuild 3106 BLAKE2B ca3e75218437da7eecb7f6cd4feb737386cfed4a002121659cf4147f141fc380dac3d3c18b9a0ea1dd3d614dd05df391545b3cad65905d1d7a52beace3c54b97 SHA512 cd03c112d9210fa24206de44e55dc8ed1bfde7a51c4278902355f01fd5d5846fb12afb3318796c9e4f57b1e5e7cae58812cf81267d9c7f776c5a35f6a0eb3082
EBUILD pymol-2.5.0.ebuild 3092 BLAKE2B 911add60f71e41659a1bf0754fa1e263ed3b8bb1222b83401ed192db2c4679629b41ec4476e552e23d0c7f85063adcc4380be16cd920a50ce1ba5ef7ee4da1c1 SHA512 2326993a095b2dda7de7b0049d192a57c5a4e28cd323629344e8723090c621fe10b1e767c50c50a3941d2241bb06a7c393210c0093bf0d5810e20419737ca30e
-MISC metadata.xml 439 BLAKE2B 68df7dfc8ca3d4d4b18b419532bade69491f2e9362f10ae2397c804132b7fc9cd08dcf9703c0a89c44588c570e0c0c1bb9bffb7394d51faf1283142dbc5f70b3 SHA512 f5a3eded9b12fa715ba2e6e10b41c75d9bd823ca0dd40acbffc3f5bfc4b36c687f720b1a4e119b4540a31faf849985778cbd72b0b2cd35af8c52ca0f808d71e4
+MISC metadata.xml 440 BLAKE2B ee3a427d21cd25ce455b61c40767eec9ded9718fa835f545b0849e24451d2004a149bd25df36e59c94d53f3fc27b3d747ac051f82db6aec593645e54a335d884 SHA512 848b215441a66d3ebcda4c06733dc6ce879b738e5210f9e20d309d2aed11f1dd6f2d267e0a4ecb702b43dc5cc9925cb026aff2a16ded4b35dce7c38607438417
diff --git a/sci-chemistry/pymol/metadata.xml b/sci-chemistry/pymol/metadata.xml
index 156735fe0d36..d28a87c8e563 100644
--- a/sci-chemistry/pymol/metadata.xml
+++ b/sci-chemistry/pymol/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/raster3d/Manifest b/sci-chemistry/raster3d/Manifest
index 16451dfe6c2f..a72ec98a9711 100644
--- a/sci-chemistry/raster3d/Manifest
+++ b/sci-chemistry/raster3d/Manifest
@@ -2,4 +2,4 @@ AUX 3.0.2-as-needed.patch 1579 BLAKE2B a9a8290e1d58da904835a3badd11eec07d4a968f8
AUX 3.0.2-gentoo-prefix.patch 738 BLAKE2B 1d2b11034bf058d45d0c55391b8f297774f2ef09278275f77625a51f965de336ae23009f5f614447483be7aa63f951cb8f435fba9e739a6f9f2d9e4a289bee92 SHA512 5cb22fdff116c6a84a9f570af99062c08463d391cb0460d06e64990eaab2c945e86f0b3f5a378144c49014c0c41dc70cafb102c5feba500c43c8555ce41612a0
DIST Raster3D_3.0-6.tar 1729698 BLAKE2B d51b752c189ef720306e78a97e75a8b30c4286b1e75bfa20dd6d8c6e02e3a57d49508faaa1324d8b1f8311049ab3a9b18847bdcb73e7237e3bc91c34fb1ea55b SHA512 656bc19fdef882713c540598173e7f46246b4245f7983edc906fe9fdab7393c47c1687c6e9366987e8af7627d4bfe56a996ff0003aa19872d79724b3e555fdda
EBUILD raster3d-3.0.6.ebuild 2352 BLAKE2B 873821af6c3823f9ecc459526e5b1933a6147ad4d440f89c2f9c91499fdcaab4da8d766b0f98a4a8304f885ef57e20f709ea9390cbd70650f2263ef2ed6789c6 SHA512 6f8e78b35b631588679429b7495ab3ba1e0c128b1e8d76349cb8604c9fd8ffe6d437761e3936ddd9322b8274f605a2e903464cdba00d293bc7959dad55c8706d
-MISC metadata.xml 459 BLAKE2B c04c6562ba9f56e65d106bcab29b29f5d3000d9ea6270777df8b6d6d90f80c35464d9d1958b991bd23b2f4d946bac4f4486baf74b2b533bd1b43fd131efae52f SHA512 fe5bb2f873ea63f4c7185601842757cb0f791cecd8651fb4e15ea4992898ae60508e4a4c7bc161bddcfa3cf4125577da029b04cf06c900d6269af3f5b63bd916
+MISC metadata.xml 460 BLAKE2B 8069cc9313427b616ac8c975914925be0d2fb7e18979ce81df6e23ecd4cd241d899cdd44a7994dfc329bd0ed5bc6114e841cb9632031de99a77192cbeea764cc SHA512 23795820e16ba08cf7d528ea7c6bbec8f92dad105264b1b87ec2f97011b9b2b51a41175a9b7d8d5062e1e9f68971c576e8e94565842591cf271c62b94eb8ebf7
diff --git a/sci-chemistry/raster3d/metadata.xml b/sci-chemistry/raster3d/metadata.xml
index 59d8b8360b0f..a1d690946ace 100644
--- a/sci-chemistry/raster3d/metadata.xml
+++ b/sci-chemistry/raster3d/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/suitename/Manifest b/sci-chemistry/suitename/Manifest
index 016fd00ac953..d8a069e3ca76 100644
--- a/sci-chemistry/suitename/Manifest
+++ b/sci-chemistry/suitename/Manifest
@@ -2,4 +2,4 @@ AUX suitename-0.3.070628-Wimplicit-function-declaration.patch 806 BLAKE2B a27bf0
AUX suitename-0.3.070628-makefile.patch 718 BLAKE2B 099d1628ca9207f04936a48a89d99303ed948e0778e32e0f89ad462136c5b37d13ed6c9e97bb0ecf91f03ebcd44477b85466872b26117815555f17f52a3acd46 SHA512 c659afd83584a02995559e1452aa7c7e3aa2db439283aa0af10e07451bf44843a5884add46d30076c387d37bd117656d6f6b3dfa1d89c52013ea29676873e1d3
DIST suitename.0.3.070628.src.tgz 29914 BLAKE2B 9633ca34c882dccb285aa98e3d9eee3663b15cffc649ec227ca78758511e5a9d3a3716c77eabf18825e3793af6d115db2ab4b0cd672d8af26eeb294340f525c8 SHA512 27811e2511da760c3c35d0a44aa798a35610a0e80a72d8aa58b78cb780156508f96e1890f558b1aa43bc3469d433352b29e53dca79f3a876ae2b7073f8e73088
EBUILD suitename-0.3.070628.ebuild 710 BLAKE2B dc0e238a485a5b3585d01e5c326bf02ebbd65be71ba9b4c2f4c898d992a5eab3bc4591dfc3dd85d883e884c815d6e1fe7fcec9947ba437046d29794c13317e9d SHA512 b8aa083a08c1230618da91a61de2ae6c1a149d77e4608384558f1a0bf660f182386a164009c3067102189b9e455146707302a2733045ae13a463de6f3723948d
-MISC metadata.xml 1118 BLAKE2B f10c14e983382b489ea47eec41a17e39df81660cc56ea001ddfc9b6c67f8e96f65f52cb5e8c24d5d5211dfbf5fa17293f3dac1d2924a77e3b517d1b3796f7892 SHA512 7b2b6baa9bbc3e4ff3e2b2c0ba15dce0af04b06133c96872bbbb3626566a025d1b7d5472fc159e879e7be0cf50b5c27ebbcbd8def5cb182fc3654b893d88f2f2
+MISC metadata.xml 1119 BLAKE2B 5f4510ca893cb6247b1379f7ff6944e5aadf74fbd5e1bf54f5f0803c830093660a051c5c814d2cfdb82477aa10dbb4ee4abf944383d9256a7e64631ca6916673 SHA512 68ed197d0cb0b832a62a2669f370a4d4564b21469d3fe09cd956e0d919a14cd31f05a7774e82750c01f6aa0651b957c2c4cc6c71b76b75325b96242aab047fbb
diff --git a/sci-chemistry/suitename/metadata.xml b/sci-chemistry/suitename/metadata.xml
index e816416cfd5d..432560e7fd55 100644
--- a/sci-chemistry/suitename/metadata.xml
+++ b/sci-chemistry/suitename/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/surf/Manifest b/sci-chemistry/surf/Manifest
index c87439eca139..141e942b4e89 100644
--- a/sci-chemistry/surf/Manifest
+++ b/sci-chemistry/surf/Manifest
@@ -2,4 +2,4 @@ AUX surf-1.0-Wreturn-type.patch 3022 BLAKE2B b97dea56225fd9018a39ef9db9d385fdc1f
AUX surf-1.0-makefile.patch 4592 BLAKE2B b402f39c180ae2a7f11f32c21dd7d5c3ef6c46204283e0f2bb76c2d260ec4f65b77ba3a351cabae850705b40a5a52fdfee8a58ea8d280ac7b6762eb7ae70f157 SHA512 618e2a8b98d004fb4730387dc1b064feab504abffc1066c17b79022f4033749bcd7173255029fe3aad2c480d3a91294d225615d6d44e79949beca1a66c9aee23
DIST surf-1.0.tar.Z 74347 BLAKE2B 543696838470f8b263d3841e177bb9054eb24a1ff0978fa09d9617e32a3a3e6b0662b37c1faa83fa449321276c8b3dd4aed80e978ea3c8315ed5b11f37196a73 SHA512 55b0e771f880931e43d677498ef4cdd92e5f57980d90b686b13c7ae612c8d695353a6f3b5ad0dab184d44e67d8cc5244e7b3f45b4f067c4174ed4399c184d435
EBUILD surf-1.0.ebuild 586 BLAKE2B da1b0ebd58ecdc6019b0f16fe59ed98e6d34a028f4747e56c8adb0a2f1f6fde1224fd7491ea42cc94eb3bf341b0dd3ee438d8c5231e2951a0ec27cbd85373088 SHA512 f78f12f6bbfe4c8ffa9ab2bccaefe52f0a500fbda91794cc647df48cefa2147bcca9d440cd4711cb8db83feb38c0eabbe3dc4b3e8712ff16ce82957d4185bcba
-MISC metadata.xml 261 BLAKE2B 509ce9958149f9cd522a2c68dd0d23ed851d19d02494611456592897093378d180a6006cddf1575fd60106119e72726255c49db2e10fde1b370bdf2f3cf8c94a SHA512 72682d17ec2b918131b551bd1ff41004965d3cf0c00d24222b34741d2eabf601cf36d4266be70ba7fb7bd0ab55d9dcb5b8e4ca41125bc31f176516797459c8c7
+MISC metadata.xml 262 BLAKE2B b7b95793a5c170b7f4be71ed1ae2a6c586e04f52fd8695ac7fdd847f1ad02c28889a81ccac03973e7b7bbfdf631b6a93cfefcaa4c876d455da566fb5056bea38 SHA512 b917961961d723c21d2c0ad186d027867dc9916433d331f6d0733870855ecfa22065ed67df63f71f022a28f4ea3e96334d0dd6463025b6d3dcd999b66b712fa8
diff --git a/sci-chemistry/surf/metadata.xml b/sci-chemistry/surf/metadata.xml
index 4ac68c154bb0..b71795dbfba5 100644
--- a/sci-chemistry/surf/metadata.xml
+++ b/sci-chemistry/surf/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/theseus/Manifest b/sci-chemistry/theseus/Manifest
index c4c13d26de42..6db223bc1e91 100644
--- a/sci-chemistry/theseus/Manifest
+++ b/sci-chemistry/theseus/Manifest
@@ -1,3 +1,3 @@
DIST theseus_3.3.0.tar.gz 22548124 BLAKE2B 0ad49f768e1584bf40e90ff6fd0d884b6b27ee59ad31ce75050293b817a3747969ab0c4b4ff982aadbdc5301c1c56522540b78aab045e841c099a80dd546c8e9 SHA512 1fba3e8019a40214defdae13d4721d170ee698337d8efd4e872af22f8ab3cb1fdd52fa9f19a858ee51bc98150692af0c6016033feb0d76f29acaf7fffbb430e2
EBUILD theseus-3.3.0-r1.ebuild 1526 BLAKE2B 487eb12d25750eebb2ed066216111cfcdea94ad35860a70bc135e3f31d351058221bd9bb327bd562cb625deb608ae7b99d6e2e53f195315e01710b8e76136c89 SHA512 bdb6578de0350773930645ab8e6e0b852115c2568fa45f182b4e88516891299b6ff042d00e2c71eea6e0abc8e015f5dd9c0455959eaac684ad3ca53266f12c97
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/theseus/metadata.xml b/sci-chemistry/theseus/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/theseus/metadata.xml
+++ b/sci-chemistry/theseus/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/threeV/Manifest b/sci-chemistry/threeV/Manifest
index 5d3c6c3cdd64..a211d0d34124 100644
--- a/sci-chemistry/threeV/Manifest
+++ b/sci-chemistry/threeV/Manifest
@@ -2,4 +2,4 @@ AUX threeV-1.2-format-security.patch 7116 BLAKE2B 6530128ba9ebe224bea5022af1b888
AUX threeV-1.2-gentoo.patch 3085 BLAKE2B b6bf352a7de785ee5312b52d15f56d85fd1bd86c8d7d87e321237058722dc6ea1b416f259fbcf17498e5ad38345d5b1b69a9e67df57beeaa2874b046b3917691 SHA512 493fc39b2d3cf1325ea00ad572e8c4c62ae48f55a82fd5eb6a1f7e91900ecfdf6cb174ec43b2fb748d6708099ddb395af34045a4439f1dbc0c574169539344a0
DIST 3v-1.2.tgz 599194 BLAKE2B cc5f14cfe4d9adca54925ee9edea2616019c9780878e2a300dcdd9492b331fa9f186473548b4a38b2f006380440b6d53c52cf567f02dc1fb6342706fb21ecbb8 SHA512 063747e46be1ab8af585909185b735edbbb760945f9d4d345d478a264e3d90c551d72f578239e7eff7768482d18b34d2b00831f87e109ec87cb36b0fd4e6a757
EBUILD threeV-1.2-r1.ebuild 745 BLAKE2B acd34138ac15191833df2f67d9cda08272e6e993da7b7b9941b0f36edfbfae48cb87562ace2b60346f6a6c803d65f9399f2e7703c8ab157d9baf3bdd616882f0 SHA512 eec0425c83705264670ccba3d8b839717bf1135114fe7baa637d638fe3214c6bc2ec9e7331b9bfc11e6e1bf530ed6ea73164c400c4344d9ca65b0b244338ee02
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/threeV/metadata.xml b/sci-chemistry/threeV/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/threeV/metadata.xml
+++ b/sci-chemistry/threeV/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/tinker/Manifest b/sci-chemistry/tinker/Manifest
index eca4b084cf5a..723716380ebd 100644
--- a/sci-chemistry/tinker/Manifest
+++ b/sci-chemistry/tinker/Manifest
@@ -1,4 +1,4 @@
AUX 8.2.1-openmp.patch 559 BLAKE2B 254a7b5d5d40bec938420527ad77e4ec96b9cee50392137eab3370df35a00a00b9488b5cd95c4e3c52d4904a6093216a782f52c82c2141cd913c6cf10f2fbcc7 SHA512 799b488ddba95ec75c2f5f97bdba10e297cad12d23239354b7d66af47b4e9ef1496e8f6b8a7446f85827a8303105af7552616bc865a4e8114b89d3e6e3302ed6
DIST tinker-8.2.1.tar.gz 33015410 BLAKE2B 0b7c94662248761459cf9d681056f5cf9c4d669a790a522f23f800bf355235f6a9f392e008b13d14cf1e17d9725abb6512077c24ff7772108d69c9cf35b43e6e SHA512 5039078781d1ce226456882dd95ad15715f1e91829d26efcdb29ceedc213973883699eb6710b0a162a74208809305b7fee734b175139e6df63d0460fe5751ae7
EBUILD tinker-8.2.1.ebuild 2269 BLAKE2B 81d02427bcbf41fe29eca4f9384b59a4be911acfed3ac7881cf1b96f1dac86aaaaa7412820d82807db2a5bc28c1b775b3097f7f5dfe9d1cdc175e39fc4f0a323 SHA512 cdbf3912bc1b45da9e2c84b1edda74b6dc1e80b922bf7dc5201e51c0bc3a42c142720c9c23128b4622c853cde38f396295dea96e24a40b797dae430b8a1191c9
-MISC metadata.xml 265 BLAKE2B d5a98b9309829a0486c4b8a4336c2d24a0fe34e926d52afd0cc87e16fcc887ca4c18851e58afb33866823121fa8f221a90e0d726dbd85552a4caf66cf03b7b4a SHA512 470f6c178e88c4e83afa46d5e901a45fc2427a779ae832df7fa2d6e25e9e8b4ce77cd3a8fe191e6242d6df3b673f0de6b4f90f1e147aa8b8dd566f18163cc73a
+MISC metadata.xml 266 BLAKE2B a03b1fcf7148cf43fb829f619c218219bcd4e66c45d12f563113401e3ae0b06cb0df9a8c0af01ea97e21453638d627d420e7df5b9b0d330ef1752253faa8aa32 SHA512 1dc293fa0d0296eba18ac2cbcd57f47ffc6cc822bf0d76e1cc86cb046700201f703d705375b5555b88cbe8780ef3750be05b8f9f8de092693e6d165c1734e049
diff --git a/sci-chemistry/tinker/metadata.xml b/sci-chemistry/tinker/metadata.xml
index da36ecbfcd6a..d4ff1000a775 100644
--- a/sci-chemistry/tinker/metadata.xml
+++ b/sci-chemistry/tinker/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/tm-align/Manifest b/sci-chemistry/tm-align/Manifest
index f8a2ec5e7dd3..dc0a140a9756 100644
--- a/sci-chemistry/tm-align/Manifest
+++ b/sci-chemistry/tm-align/Manifest
@@ -1,4 +1,4 @@
AUX CMakeLists.txt 182 BLAKE2B a6bd5aedcbeb2b8019d59123da91cf668c3717a3e41c2259b2e023a4661aefeb2e4334d10ba7b236bfb6fb1cf52c87aae393c9af8b5e3d2f12663799aeccab32 SHA512 1e77edbfb2184e11c09fc2133eb40bd9d4b2fb04a30139134939482f4e817ebfa5c316e8d75a6fd5aa866ef1f6f56d65df924dc41cfb698330943e0bc433948d
DIST TMtools20150914.tar.gz 982948 BLAKE2B 788f43040c1262c7e9eae2b47b0035d320a30fe7194e340d682b78e5961b82e46eef2b0a43d1ae458b9d5da6570f9c0ec0aca51b6ec3e25f0447fd43d629f592 SHA512 5fda29f6437ac9b0216a037496a01502de07e5a36736815833cb09217158a959370e750b75c55a54a49c733e4bd28be53b2dcbb25d71e2897273a4280ed3b530
EBUILD tm-align-20150914.ebuild 717 BLAKE2B 45ca4e8358af29d5e4f8890548515a15aace7549d85a988699e5aaffa9f8657617c77b62a67794147b64ba36499f83cf9b7e1a89fa54c66d3a7c7df557ea3979 SHA512 b89bac74a0fea20b4bcf35b552465144beab620372ce6ae368dab49118f6ae773e569d17b7fbff2abc6455b3ddd353dcd9eb343b78cd4bf58614089d60b5f21b
-MISC metadata.xml 1294 BLAKE2B 7972c0f1c379a3929c3d561756099a2071ddc9a6ff35a905a30807f1d724100aa39e98bf549ab4614a7f7b95628246fde7f44d655dceebb0e8f4a4f70686123d SHA512 e1b90b61682c3c1099c3b2d5d5fad166e408b14aca67e49521f470b2df1c746aa4c1eeae06f4f67fe6ccf8ded94c5fbe7a194a441fae8fab450f69acdcb49663
+MISC metadata.xml 1295 BLAKE2B 4dc3b05b67d6e27d90cd378d53ff5309e898ce56af4ffd6a02b3eb5f0827b1f05ec843325de35dd4efe82163797ffa0d430621af89a4669c2ee75cb8560e3e30 SHA512 fbffe7e094f35d8291d6bdee5f2900f170cadeb7811cfa17dcb0be5ab9b4e41527f1ce6a93f760103078285c254b84340c19ceefc33fde53814416d735c4f0d1
diff --git a/sci-chemistry/tm-align/metadata.xml b/sci-chemistry/tm-align/metadata.xml
index f53ebfe8d765..e29234951cb7 100644
--- a/sci-chemistry/tm-align/metadata.xml
+++ b/sci-chemistry/tm-align/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/vmd/Manifest b/sci-chemistry/vmd/Manifest
index 0b61e652da38..f4eeca2aa8bc 100644
--- a/sci-chemistry/vmd/Manifest
+++ b/sci-chemistry/vmd/Manifest
@@ -1,4 +1,4 @@
DIST vmd-1.9.4_alpha51-gentoo-patches.tar.xz 14604 BLAKE2B f8621956785d365cc056ba53373120d8f99da1476ab9789af6bb8ef00b8dd8c2a4c3599d75e13eba2fc5630b291aed966ce64f7f408504b079e3e994e45da243 SHA512 c57fd81e667e405ab1208a4e4a1d63710e593c07f554420c32980becd3547c2df98fbf6e439a53a626121fc361559f1ba53ab7b7235c97422bba61ece59d23bc
DIST vmd-1.9.4a51.src.tar.gz 42826371 BLAKE2B 239d87f975c41a71096083028c1db8bf40cc058fc687fd9fff3c14c97c9b12bd68818d4c2eaeefd8c95c661409f1f056bce42178d0ba9271aa344fdce6f81ea9 SHA512 b42af6a4a7b1d2f0d242f89bff3a1c25a608ff59b9902b90154ba82a40439afb802a2d319363fa388a5211420fdaf0ee9bfd1f0a0e6e85d89d1dd506b373ba40
EBUILD vmd-1.9.4_alpha51.ebuild 7598 BLAKE2B fa0cdea71d0a85069b197d40e6d3cbc54a3136646bf18c6a9a702e591f2bbaed15606499923e8d75d1996f7e99fbd48604892add5fa16dd161cacda548df784d SHA512 8c9231669f17c59892114ee3aaf5f5d32b5c1b451795d8bcd1e7366bbf9d13723938140acf7e9e7504844e996986a96343df75ad9f4204ed5c14bec63ac0d7c4
-MISC metadata.xml 778 BLAKE2B 6c4202950f57a4d7a3004e966c761325a0a31ab19fe06a6bd69882bd685e41424953104ff653c03d6cbbcb60bb9aba45fbcec43cd228c4bb57fcb1c63a2bd881 SHA512 b967b71fb9f1b47a9d3b69e6958dfb0314a9f071dade7ed1876e91dfa73188748faf11ef832d240a71745b36a30422bde79de2e9ff8e5ec6b6da4b11b40d19c9
+MISC metadata.xml 779 BLAKE2B 5d824ae91cfeb1b482fb2cf1e5f8968dffe1abea898d26dc6e4949d7ba86396474964c847ee511d19d00769ed2bdf0f9a4daa7bfa779985308a93636dccfba82 SHA512 05de02395a8220118a2694df845ac125e0b2eb2720a699cbda2a84b73487ae14cb44077140698c109b5f58c30a1815b2a670a02121f85b70b90f75e40a9764d9
diff --git a/sci-chemistry/vmd/metadata.xml b/sci-chemistry/vmd/metadata.xml
index 25e17d0a8ff3..1073cf919a8a 100644
--- a/sci-chemistry/vmd/metadata.xml
+++ b/sci-chemistry/vmd/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>alexxy@gentoo.org</email>
diff --git a/sci-chemistry/votca-csg/Manifest b/sci-chemistry/votca-csg/Manifest
index e9152c9239ef..64dee625e8f5 100644
--- a/sci-chemistry/votca-csg/Manifest
+++ b/sci-chemistry/votca-csg/Manifest
@@ -13,4 +13,4 @@ EBUILD votca-csg-1.6.4.ebuild 2290 BLAKE2B 1fa3398fce620103e69529a1b36f1b21fac4f
EBUILD votca-csg-2021.1.ebuild 2097 BLAKE2B 3ff69560e5ed700f6c0cf3f15442d7ce277af2acab62e552fd921ca51f35348cd77ed25e89afa2208fdb6e0c8c4ac4771ada07fdb1fd85ba1bcb5d2d1dc647fd SHA512 5b52a2a2bb86cf0024fc64b60b3bd51fedb7f5d8dc4e2cfcb3e1e20dbd661469be79ec486c516c8c40b98d13e232ef5f3f7701e2c062ca3171beeebe047647ea
EBUILD votca-csg-2021.ebuild 2033 BLAKE2B 77fc10474aff5882c3d99133175f67ee51704dd1a32e101a42afb5e4417f3c478b4311f9ed619d62c1eab13328b130cfb1e500ff1e890c518adc0b1fcf167c6c SHA512 de1e8c1d9cb22e75ebc8dc7c043aafb04dce6eaf3d7173f1e745a6578b7236e9f71ce3b75fa5698333eca7c5c74a41337eba3fb4cd5c037e8bf3172bf78296eb
EBUILD votca-csg-9999.ebuild 2072 BLAKE2B 1b13ee8b2bd47a7bd17fbddf1cc46f3ac38a21ba4c2d6d5a453ef3c55e2894b31c20c0f32d2b335b76d76ca56df6838b2ed6a616ee96e9dcb6fb7981f2f10346 SHA512 561f20660a4db6bca57c3bcf10c69aab2834b0a054c2ce95245a52536a1064c1481840001594cf2bcc4c060e3c407078d9d0b67497bd861d3f0a1df6b0ba3678
-MISC metadata.xml 676 BLAKE2B b3f2e43f5cb505876216b0a329410c9cef1b44a9bbd7e1c61faa4acd00dbe87ea0cebb00ed78dc00b9e1d2b08b95e3c40d25fecc0738c992a3f933e430f94e2b SHA512 14ecd498eeeed1576923d8da9bc5dc98e47c1d162173b7f2419ad367fa84e227555bd0365709be8a456dc5388ea6fa6734fa7df3c82fd4efcd1cf3460c7e12a1
+MISC metadata.xml 677 BLAKE2B 4d577f0229184293e80dca331cba9f8d234a73eb73b6eac92d7e87e2aefe90de69be1323d3e401cfedb0aa6f18ab77b7ae6f3f4c8c1aca836d7ac8a57184eb32 SHA512 f7999c1c10630ae72535609f9be857e7efbe89f0cc99f55268c66271625777e64c0a552317c49cde3ef5652be68c7e91630b8cd038b255b71a1566fac75b91e7
diff --git a/sci-chemistry/votca-csg/metadata.xml b/sci-chemistry/votca-csg/metadata.xml
index 795272141d7f..e20cfda723ef 100644
--- a/sci-chemistry/votca-csg/metadata.xml
+++ b/sci-chemistry/votca-csg/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>junghans@gentoo.org</email>
diff --git a/sci-chemistry/votca-csgapps/Manifest b/sci-chemistry/votca-csgapps/Manifest
index 3dee00de8140..10fb37928a28 100644
--- a/sci-chemistry/votca-csgapps/Manifest
+++ b/sci-chemistry/votca-csgapps/Manifest
@@ -2,4 +2,4 @@ DIST votca-csgapps-1.5.1.tar.gz 26006 BLAKE2B 8651978c15087fc7332fe229cfc33d8c42
DIST votca-csgapps-1.6.4.tar.gz 19589 BLAKE2B 90a20c3acef3254b412697dbb543c216d4546241c2f98d8b1e6c7fbd2de5dc5268965f1035843c6832579158843069c610ebbf3363d2e604a1c7c3dc82e3d8d2 SHA512 89ea658092e979c90b9f3d75a8dd9f8ec95278c26fafb30c31a23581dcd7a65e52c8c7696ef14da5821e283d16ab96880041b7b20c9097f99b2fc1eac4a38184
EBUILD votca-csgapps-1.5.1.ebuild 638 BLAKE2B 4aab8967b46b38c2202ff567618f8903ae07784d413d3204e5951febfee11bef58b66915f7d441e91a185267b61b72ef77c4c9d476274ec48bf1be9007c49896 SHA512 c2c959e0e9f551807d4cc395346159529669b4ad87b6550a20d281c4a27e93dd98d6288869b9bd9548e2f228fe451ed4327351faa6340518c6be3e074c1f0bc7
EBUILD votca-csgapps-1.6.4.ebuild 600 BLAKE2B 1c09b68b2bf4497dd45335823296fbc3ec9e11c12588ed1d7d1ba261bc61d14b7260c2618922cfa09f7303525ed3fec4c1d744fb855f05ae29001c53ef2d9a4d SHA512 5203f67e3ac3c96f807ba42d7ce6b9daccdf71fb51422e204908092e44a5ddb89eb33a5c44ea6dbf571cf7ad2b5f3c826d01ce90a51f64514c61ae41473dd1f2
-MISC metadata.xml 457 BLAKE2B 9d392be6c061ebd3d975308065fcdec4ee061268f4b8b79e122b183d2e4f7259fdb9e165b8b3f030f1edbbc4f112757b1de7a50929ac112d5633143f9585699a SHA512 42a8ccad09d35dd4677b70005606582207747ae39d62a7ea75e2f5de28f887fee4265c8ae3b38e5cdb3017cc84c8902e2a525ae31fa5dd0aa00369e9b428f563
+MISC metadata.xml 458 BLAKE2B 7ece1794095e4423ca590746617a391a434d36916e38f3b6b723a53d38c0804eda2fea4d17e3dc4db67fdee0fb94accb7d9f84b8821993c3370bb013543bc86b SHA512 5871a39220f39dfde991bfcb5d825f3b876c0fe1cea13d87171b1a4675db311c579fbe7930d9fc350640c9545d466073e6d1eb8f7cf2870f1d95ae92804520f7
diff --git a/sci-chemistry/votca-csgapps/metadata.xml b/sci-chemistry/votca-csgapps/metadata.xml
index b555f7427afd..525a7af3b235 100644
--- a/sci-chemistry/votca-csgapps/metadata.xml
+++ b/sci-chemistry/votca-csgapps/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>junghans@gentoo.org</email>
diff --git a/sci-chemistry/votca-ctp/Manifest b/sci-chemistry/votca-ctp/Manifest
index b0a68a069235..007ab7ec3548 100644
--- a/sci-chemistry/votca-ctp/Manifest
+++ b/sci-chemistry/votca-ctp/Manifest
@@ -1,4 +1,4 @@
DIST votca-ctp-1.5.1.tar.gz 1345994 BLAKE2B 6e927c5d57abfff335412bdac085c9dd81696503310e58a89bf2207b07f9d9900d11d20176a11fbde6d6cdfa97f50faa5e877889e35201ad9ed5dd93dbc158cb SHA512 686d7193cdd6a763197dd4f332554c9c6c2022c539191d0a243e70450aa2a4c7048fff3c06636aee09525516fb3717fe49934d5daf2dfcdcbc08be416cc4b6c0
DIST votca-ctp-manual-1.5.1.pdf 948647 BLAKE2B 4afec48d0e6bb29dc86d4d22fce74a8d2197d6b7a1ed35a5b09af84c5bbc0fc49b91e045c85e5b5ab79beb5a7de1db78a15e395a1a5faf4c11cc1b58c1ffca97 SHA512 b4ae79b2da0037cc325fdff3b0fd8d142d6bfdad5bc11991cee314f40f105bcdcb1189d17679a84eb37da7a9bb686d0c5ee57c7796a0c6b787b70d53222dbc17
EBUILD votca-ctp-1.5.1-r1.ebuild 1515 BLAKE2B 634ed349161b15dfc152ffbfe0ad3a24f0544c470c597f30fcf8c1ed4a198e4db4f95c41aa71db0db1bd3faecb71ad8fc437b4ec9793d2e8def8dc12489ecd11 SHA512 f2e0cbf730a44aabd0fe5d34626781dc43977023e6a1d7a98604563430f28a18e79214b1dda818f8b5c25827db8ca4dafac587c064f75d4278916af6668791a2
-MISC metadata.xml 453 BLAKE2B a61c365529a1c877e5bad44f6e2f0a24a8797956e9e3a5b3d4649c58c27df9301b50c84bb5767ca52a151e2b509f46a92cd3f17c1020fb7bedf7fb2fe708b48d SHA512 53ace87a281559ae8881b8b010c76801696521de930dcfaf12a5e320456cb4a21a55a7873d173bdb5cc740f3cdbccf1daf62bc83579342f4f23329df7dbd2dba
+MISC metadata.xml 454 BLAKE2B fc74a3b0be617a1298d983dd1f63d59b4022af9a9762d78c4647ae4fe7402e0f37392e0c9c213adff4c71c21741cbe002bef6b4bf19843e1d41810bec572b390 SHA512 3a6dc400309fc883c76fc93004f31b8a34126287acee999b345cb607147f457e3cfd7ebe5d5b17507211813b90fd3bbbffe8d56d235528cf465e994a2a6d7524
diff --git a/sci-chemistry/votca-ctp/metadata.xml b/sci-chemistry/votca-ctp/metadata.xml
index 7b7ecf654688..a77179a479f6 100644
--- a/sci-chemistry/votca-ctp/metadata.xml
+++ b/sci-chemistry/votca-ctp/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>junghans@gentoo.org</email>
diff --git a/sci-chemistry/votca-xtp/Manifest b/sci-chemistry/votca-xtp/Manifest
index 8933d42bd96b..4bf64e6d4fb6 100644
--- a/sci-chemistry/votca-xtp/Manifest
+++ b/sci-chemistry/votca-xtp/Manifest
@@ -5,4 +5,4 @@ EBUILD votca-xtp-1.6.4.ebuild 916 BLAKE2B 3f322407b39ca300186e1e283a6a85749b7951
EBUILD votca-xtp-2021.1.ebuild 1072 BLAKE2B fd96c0a844636d52b3d4f10fc3cd4ad04061f6e015d1e8b087bcd50157e4d8a2586d7a4948b39987628d6efd9fc0c373d8bb77344bc62c3651d7b08704bc59fc SHA512 a1e95165d8c55351762d5a1cf70316862de2e30b765df1aaf8d904aa0cc0bf8d9e1f75aba3c88a4c7b273fee29d6a1bc89d710bb3fe298da5ee92b4f427a4f4a
EBUILD votca-xtp-2021.ebuild 943 BLAKE2B a0596dab1f69c3c8e9afb3699b44ab0e49cd4e8f5ef6a397eed39ed051e13f0b457ca0b0e225329dcf73bc58799d4e3fc217805784f936d9e1ee09c3586bd998 SHA512 9c4688a19b3a4ef75c79a0500f253aaa1a99d38ed4e56948e4743ea03e734e613be845b56d084c67d783a8e76cd4ebc2888b94bfe3c6e67a9799bc22af6ff19b
EBUILD votca-xtp-9999.ebuild 1092 BLAKE2B 4cc16fc9d7abf33f18b3120f9b756b1ada45dddfcb0686a28f0d522feb989ad39f54fb00249e7b388bdc4a063da89486cfd2827cfb7d3eddb0303f232fc3af91 SHA512 967feec2008dc88c8a15d825876d3d83058792843d2a7b7a67f702f7ea097a32c99397909c65eea1b0e27d5eb76cf156749ae1f68630cca8af2270f47928485d
-MISC metadata.xml 453 BLAKE2B 51ee11d9c55f15fd0382a7c422d1c12364901a5ac257f57d04b91b8ca77acf9c1eb709879bfc6042b577961352cbc4e31b01ece3a8c650eaffa9b4ebc6d385fb SHA512 892c8f84df6bd19e969b372def9a485be9121d8f7ab410b532529980298e57d0705f73fac409d8f251449cf2119dd3f28133e08d21d0e73b27d5ec0e9a3f205e
+MISC metadata.xml 454 BLAKE2B 649578a46b3cbea28539fb2f2716518819f2740155433d1af07d3ee3163ccd3c2db2c69b75de829db3c46e3e2ef500892abae16b2b920b8ca5ac68e205c93cd8 SHA512 427fc4f2f5c0e265af0f6cbd7341860e3c8c62afcfacd0edf2ec53e9eb2228dfb3ada0f9f273127a0805f8fb87cbae4e14daefbc068d6afe655c917cb6c74df4
diff --git a/sci-chemistry/votca-xtp/metadata.xml b/sci-chemistry/votca-xtp/metadata.xml
index 1b28210e37ef..979a4dea2e23 100644
--- a/sci-chemistry/votca-xtp/metadata.xml
+++ b/sci-chemistry/votca-xtp/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>junghans@gentoo.org</email>
diff --git a/sci-chemistry/wxmacmolplt/Manifest b/sci-chemistry/wxmacmolplt/Manifest
index bfd3f0f96752..bd78c4e604d7 100644
--- a/sci-chemistry/wxmacmolplt/Manifest
+++ b/sci-chemistry/wxmacmolplt/Manifest
@@ -1,4 +1,4 @@
AUX wxmacmolplt-7.5-glew.patch 232 BLAKE2B 9e0bd2849cc20664ca4a6b6678d2d78a723ae3e730225355dd70db0cac56d501c14aaa34d86d2ff87932feb950178a7245a943b763bde728f64a07a49ed4ba29 SHA512 cf1f77f9a86224b866f55154316a044314fda47a82de9b5be4ee58ed4ea8f4a07f9540e7060f477249b773e147739f15f43df293110045bdbca9567c60fbd5dc
DIST wxmacmolplt-7.5.tar.gz 1965376 BLAKE2B 01033266ae66a215582a62690e792ca4ae82c8a8885fe277e2e77ee67ff70f02f6a9c10467ea6f3cee15933c6c89ba3c6137c9d29e47322ac4f395a3efd41383 SHA512 a1064d5068136b2a91328c7f912ff57d4741081d6d61437e7b4567fbf732917485b391493d637b8892bdad50b539363cfa9c778bb35407a9c0a2bfed20e42bc0
EBUILD wxmacmolplt-7.5-r1.ebuild 986 BLAKE2B 67cccea1d2e7886ee67f78ac54548047c2fe889dedfef45956a4614149d5597fd0376f0f01fd59085c9f925faa2284c2c22d4bae2d8ee98f2eca3be6b06e96ed SHA512 6e1d9051621a36deb7aeb997aa93a0b5becea1b3f7512fc56d2ee97788b5a9bedace25fb40a7a7b4e77a76830e7f8aa61ad0c32ea3e1afdb66b744197d50daf0
-MISC metadata.xml 635 BLAKE2B 16b84b540cfe7fd49b9087c530ee49e035fc930a392dfaaef798338b3361c2b1d11626020d56de871066998f0e88ab39c3a6fac0633b3f8b07864a9c3424d0ae SHA512 d9bddd02379c3a39633028fbc6d0645ea9c46c344781e2c754539afa35577967a02e5c44278ec0fa015d0b9ba7f8fdeb0c9ad14d72d6abcaba85d0021c426f76
+MISC metadata.xml 636 BLAKE2B 1c3ecc2d37a10f52148f7484ce3525ebe5bcb274a340294f4668ff16fb698d219c5da2da095ec6f60558233106ea2d9adbb7c4e10ef31db0ca97f224ffccbfc2 SHA512 e198eaee50b7b7938a484c1f277b2b30e08b7428d5eb8454c80f262c4133a2f6be0cc000429793802342513689282647e4c57c2352759c1af873cab8f15dadd8
diff --git a/sci-chemistry/wxmacmolplt/metadata.xml b/sci-chemistry/wxmacmolplt/metadata.xml
index 9e890dd280b7..5fe032a3c451 100644
--- a/sci-chemistry/wxmacmolplt/metadata.xml
+++ b/sci-chemistry/wxmacmolplt/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/xds-bin/Manifest b/sci-chemistry/xds-bin/Manifest
index 1b1e8c9e5763..f4e1a6e0072a 100644
--- a/sci-chemistry/xds-bin/Manifest
+++ b/sci-chemistry/xds-bin/Manifest
@@ -1,4 +1,4 @@
DIST XDS-INTEL64_Linux_x86_64-20170930.tar.gz 9501598 BLAKE2B 33eea09210e9196859f62e66770aef3b34ace7d0cbe50607ef03ba37943fdb13ddf570b53cb2a7e668e650284ff245767a9cca9f6595de9fdb1815bb9625b56e SHA512 8da1d75633e8bf8495c30926a622f57aa0a51ea3b724101c96da6fae0a303860a4a4a8eaf3ecdf66948f18e702211aab3800760ca498c4562e947e3f94c25a4d
DIST XDS_html_doc-20170930.tar.gz 117249 BLAKE2B 81e0c216eee38f21acc4dba299a20c4790f4aa1dc58e2d0dab5474784bf01842db41ab869b6d36cdfc9a31771e0bcad41b062bbf000771552c7de36f36a2291e SHA512 bbc24eeb0f8a63e6186906b0c0ee67efa83d1cdd169b091878c323455e2448ee6cb1667467bc9701b4e1839af2d10d4cb3e8f8d080b7dd5e449fda03c2aa8f89
EBUILD xds-bin-20170930.ebuild 1174 BLAKE2B 9a5a18719f52eab2f114ce58ba6ade158ae138b70c092967d5ed0adeae6867963c4cf6391f6bdedd0296a56fad46ab1214cde0faa02c4dab701d572268f3b8f6 SHA512 47963c7d31eaa1d6f2eaf172ef67a7d448e3bec36a9e6da35f85532bb878996ef6791977efd06874e0d3d790820306214e190af1ea07bca30f3320ed64605470
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/xds-bin/metadata.xml b/sci-chemistry/xds-bin/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/xds-bin/metadata.xml
+++ b/sci-chemistry/xds-bin/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>
diff --git a/sci-chemistry/xyza2pipe/Manifest b/sci-chemistry/xyza2pipe/Manifest
index 964712af25b5..d49a26f26741 100644
--- a/sci-chemistry/xyza2pipe/Manifest
+++ b/sci-chemistry/xyza2pipe/Manifest
@@ -1,4 +1,4 @@
AUX xyza2pipe-20121001-gentoo.patch 3974 BLAKE2B cf3f4b58c6348a6295b7874ca20d7d88f6477e1174b54bac7089898ff7509fbf07d8d34aab2d333059c67f7ccc9d1b99e4e40c9bfd8a327f600fc4578a2f1a06 SHA512 7b8be1fd799d65e9a600766afb21e95a4722eff8a657f88d0adaf5aaf11ed369f6d8a27f3e003337570837abc45cfa9e758d1219af275773f79b81d1c1c322c4
DIST xyza2pipe-20121001.tgz 61002 BLAKE2B 648e65b63cc0b363dd0087b7ef64a1e287654a165baaf7d967821f11cffb70dd7f0da864dfa3b915553546c8cbbc83fda411d9b979551d3d72334db6580e5d64 SHA512 b64abf46a8d7f3530eecaeec3bc8b143600c6823174a22727868087c2f7f17af0b538a0521e3a29806dc608b003948a1e31296ab395bc3c0089c5dc7a391d855
EBUILD xyza2pipe-20121001.ebuild 682 BLAKE2B a1cbd50a946dc37ab1e55f998b2ad6631e53fd6138f886009ef28e4a121721c5a8e6ffcdd0d79c4b387e2016b456c14d9b3db039f95bd6d6c85f774d8fff71b2 SHA512 4253c166e0a2101b3a5b91aed25193107d588cfbc3db07b66f64ab98bb2888a5e3342d093db15c9686be6519d3ad3372cd6b53f52a4091ee35a458d210c428e6
-MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
+MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c
diff --git a/sci-chemistry/xyza2pipe/metadata.xml b/sci-chemistry/xyza2pipe/metadata.xml
index 8937bad0b175..e490bcb8aa87 100644
--- a/sci-chemistry/xyza2pipe/metadata.xml
+++ b/sci-chemistry/xyza2pipe/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
<email>sci-chemistry@gentoo.org</email>