gentoo resync : 27.10.2018

3 files changed, 2 insertions, 30 deletions

diff --git a/sci-chemistry/tm-align/Manifest b/sci-chemistry/tm-align/Manifest
index 8260fae5754a..f8a2ec5e7dd3 100644
--- a/sci-chemistry/tm-align/Manifest
+++ b/sci-chemistry/tm-align/Manifest
@@ -1,6 +1,4 @@
 AUX CMakeLists.txt 182 BLAKE2B a6bd5aedcbeb2b8019d59123da91cf668c3717a3e41c2259b2e023a4661aefeb2e4334d10ba7b236bfb6fb1cf52c87aae393c9af8b5e3d2f12663799aeccab32 SHA512 1e77edbfb2184e11c09fc2133eb40bd9d4b2fb04a30139134939482f4e817ebfa5c316e8d75a6fd5aa866ef1f6f56d65df924dc41cfb698330943e0bc433948d
-DIST TMtools20140601.tar.gz 934391 BLAKE2B 4dfe18501bfd26b0c12f734175b908f65e97cea9cf2c620c100aa2f68f10fb288c8973c71c9fc6364a635f0275d3a04d7eaffdd5833345dda57e7a318e7c4e5f SHA512 99b90425ff051c836e19225601ddfb1576bec9c8f233aafeba96075f924a3c0892b5b1cfef36254ff5ef468a6dbf64f7fcc9a3ce24a0d869b3c1eb87c0149765
 DIST TMtools20150914.tar.gz 982948 BLAKE2B 788f43040c1262c7e9eae2b47b0035d320a30fe7194e340d682b78e5961b82e46eef2b0a43d1ae458b9d5da6570f9c0ec0aca51b6ec3e25f0447fd43d629f592 SHA512 5fda29f6437ac9b0216a037496a01502de07e5a36736815833cb09217158a959370e750b75c55a54a49c733e4bd28be53b2dcbb25d71e2897273a4280ed3b530
-EBUILD tm-align-20140601.ebuild 720 BLAKE2B 169462fabc7fb255e1746ae1f692b6f989591787ca53023ded771f56489c4c8a2407d40d45186b8fa89ba3750d51e45ab889e4ca6b4f768fa28f1f8eea004f4b SHA512 04d20ceb4a1a33277af7cee7ec49e1902eceb5cb33361020a56f6b9bad62b0c423867104fb6b4bda8b0197d3b7d0a0e057cea87907ab43d69cf10961ca082543
-EBUILD tm-align-20150914.ebuild 719 BLAKE2B 085ff1781394ded54c8f8759c5dcb3c74f92283cfe94ab6f6f85b5d6f8e09eeb84d539aacfe998384870db0f7f34f7cb3c560d316eb55ffb9628d6cfb343dbbf SHA512 e725f7d70953c620a4082049e435647d2ead74359912e0028ef065d6fb428e4ac885f8c13f7c4d72fbe91367853066b2451d351c4aa0a4ab82339bac85608ef0
+EBUILD tm-align-20150914.ebuild 717 BLAKE2B 45ca4e8358af29d5e4f8890548515a15aace7549d85a988699e5aaffa9f8657617c77b62a67794147b64ba36499f83cf9b7e1a89fa54c66d3a7c7df557ea3979 SHA512 b89bac74a0fea20b4bcf35b552465144beab620372ce6ae368dab49118f6ae773e569d17b7fbff2abc6455b3ddd353dcd9eb343b78cd4bf58614089d60b5f21b
 MISC metadata.xml 1294 BLAKE2B 7972c0f1c379a3929c3d561756099a2071ddc9a6ff35a905a30807f1d724100aa39e98bf549ab4614a7f7b95628246fde7f44d655dceebb0e8f4a4f70686123d SHA512 e1b90b61682c3c1099c3b2d5d5fad166e408b14aca67e49521f470b2df1c746aa4c1eeae06f4f67fe6ccf8ded94c5fbe7a194a441fae8fab450f69acdcb49663
diff --git a/sci-chemistry/tm-align/tm-align-20140601.ebuild b/sci-chemistry/tm-align/tm-align-20140601.ebuild
deleted file mode 100644
index a0010e5ebfcb..000000000000
--- a/sci-chemistry/tm-align/tm-align-20140601.ebuild
+++ /dev/null
@@ -1,26 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit cmake-utils flag-o-matic fortran-2
-
-DESCRIPTION="Quick & Accurate Structural Alignment"
-HOMEPAGE="http://zhanglab.ccmb.med.umich.edu/TM-align/"
-SRC_URI="http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools${PV}.tar.gz"
-
-LICENSE="tm-align"
-SLOT="0"
-KEYWORDS="amd64 ppc ppc64 x86 ~amd64-linux ~x86-linux"
-IUSE="static custom-cflags"
-
-S="${WORKDIR}"
-
-src_prepare() {
-	cmake-utils_src_prepare
-
-	cp "${FILESDIR}"/CMakeLists.txt . || die
-	use static && append-fflags -static && append-ldflags -static
-	# recommended by upstream
-	use custom-cflags || replace-flags -O* -O3 && append-fflags -ffast-math
-}
diff --git a/sci-chemistry/tm-align/tm-align-20150914.ebuild b/sci-chemistry/tm-align/tm-align-20150914.ebuild
index a19b8da0b4c1..26eb0fd6597f 100644
--- a/sci-chemistry/tm-align/tm-align-20150914.ebuild
+++ b/sci-chemistry/tm-align/tm-align-20150914.ebuild
@@ -11,7 +11,7 @@ SRC_URI="http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools${PV}.tar.gz"
 
 LICENSE="tm-align"
 SLOT="0"
-KEYWORDS="~amd64 ppc ppc64 ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ppc ppc64 x86 ~amd64-linux ~x86-linux"
 IUSE="custom-cflags static"
 
 S="${WORKDIR}"