diff options
| author | V3n3RiX <venerix@koprulu.sector> | 2022-10-20 07:59:50 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@koprulu.sector> | 2022-10-20 07:59:50 +0100 |
| commit | 2eda3a3b8ebdb3fc8552feb6f49e466d3bc8e88c (patch) | |
| tree | 69a469da2fa8c3f4920325ac5595300929f5d884 /sci-chemistry/tm-align | |
| parent | 9ed0c42eb618229fa6f45e10155ee535e1f605a2 (diff) | |
gentoo auto-resync : 20:10:2022 - 07:59:49
Diffstat (limited to 'sci-chemistry/tm-align')
| -rw-r--r-- | sci-chemistry/tm-align/Manifest | 2 | ||||
| -rw-r--r-- | sci-chemistry/tm-align/metadata.xml | 28 |
2 files changed, 15 insertions, 15 deletions
diff --git a/sci-chemistry/tm-align/Manifest b/sci-chemistry/tm-align/Manifest index fff49a5c474a..015faacd404d 100644 --- a/sci-chemistry/tm-align/Manifest +++ b/sci-chemistry/tm-align/Manifest @@ -1,4 +1,4 @@ AUX CMakeLists.txt 182 BLAKE2B a6bd5aedcbeb2b8019d59123da91cf668c3717a3e41c2259b2e023a4661aefeb2e4334d10ba7b236bfb6fb1cf52c87aae393c9af8b5e3d2f12663799aeccab32 SHA512 1e77edbfb2184e11c09fc2133eb40bd9d4b2fb04a30139134939482f4e817ebfa5c316e8d75a6fd5aa866ef1f6f56d65df924dc41cfb698330943e0bc433948d DIST TMtools20150914.tar.gz 982948 BLAKE2B 788f43040c1262c7e9eae2b47b0035d320a30fe7194e340d682b78e5961b82e46eef2b0a43d1ae458b9d5da6570f9c0ec0aca51b6ec3e25f0447fd43d629f592 SHA512 5fda29f6437ac9b0216a037496a01502de07e5a36736815833cb09217158a959370e750b75c55a54a49c733e4bd28be53b2dcbb25d71e2897273a4280ed3b530 EBUILD tm-align-20150914-r1.ebuild 623 BLAKE2B a29aad98e25a9538b9a0db2310c685ffd308648aa1309c7a393099aa514096bb648459cf01f690224e1ee0ae85ff6082fd0dc16bfb1bc6020353f0cadff53240 SHA512 5d48cc2e4736953b113323f732058199fa9ec71fecabfe9c6888fdfc74579af9dd99c4a9d28f8012d103a1bc977e7ddd7f8478f56c20deb6226f3881e8629fab -MISC metadata.xml 1295 BLAKE2B 4dc3b05b67d6e27d90cd378d53ff5309e898ce56af4ffd6a02b3eb5f0827b1f05ec843325de35dd4efe82163797ffa0d430621af89a4669c2ee75cb8560e3e30 SHA512 fbffe7e094f35d8291d6bdee5f2900f170cadeb7811cfa17dcb0be5ab9b4e41527f1ce6a93f760103078285c254b84340c19ceefc33fde53814416d735c4f0d1 +MISC metadata.xml 1313 BLAKE2B 6602de0b8fd5cf11c31c8407483997e5d959fe073183e8ea7d26c092dde2348cb22b619c490ed2f905d217413cc2fd14f302fc2483b8263bbbae7bbec077c970 SHA512 90bd4b62d967961f18454c66d741fc4f00c286907e75f40466f2c13405aab796d044807d26f3da29584d2306c122b79a6273650f66c89b6c56a5bfa05895bf84 diff --git a/sci-chemistry/tm-align/metadata.xml b/sci-chemistry/tm-align/metadata.xml index e29234951cb7..c3d1b975b668 100644 --- a/sci-chemistry/tm-align/metadata.xml +++ b/sci-chemistry/tm-align/metadata.xml @@ -6,19 +6,19 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> -TM-align is a computer algorithm for protein structure alignment using dynamic -programming and TM-score rotation matrix. An optimal alignment between two -proteins, as well as the TM-score, will be reported for each comparison. The -value of TM-score lies in (0,1]. In general, a comparison of TM-score smaller -0.2 indicates that there is no similarity between two structures; a TM-score -greater 0.5 means the structures share the same fold. + TM-align is a computer algorithm for protein structure alignment using dynamic + programming and TM-score rotation matrix. An optimal alignment between two + proteins, as well as the TM-score, will be reported for each comparison. The + value of TM-score lies in (0,1]. In general, a comparison of TM-score smaller + 0.2 indicates that there is no similarity between two structures; a TM-score + greater 0.5 means the structures share the same fold. -What is the difference between TM-score and TM-align? The TM-score program -is to compare two models based on their given and known residue equivalency. -It is usually NOT applied to compare two proteins of different sequences. The -TM-align is a structural alignment program for comparing two proteins whose -sequences can be different. The TM-align will first find the best equivalent -residues of two proteins based on the structure similarity and then output a -TM-score. The TM-score values in both programs have the same definition. -</longdescription> + What is the difference between TM-score and TM-align? The TM-score program + is to compare two models based on their given and known residue equivalency. + It is usually NOT applied to compare two proteins of different sequences. The + TM-align is a structural alignment program for comparing two proteins whose + sequences can be different. The TM-align will first find the best equivalent + residues of two proteins based on the structure similarity and then output a + TM-score. The TM-score values in both programs have the same definition. + </longdescription> </pkgmetadata> |