diff options
author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
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committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-chemistry/prekin/files |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-chemistry/prekin/files')
-rw-r--r-- | sci-chemistry/prekin/files/6.51.081122-Makefile.patch | 41 | ||||
-rw-r--r-- | sci-chemistry/prekin/files/6.51.081122-overflow.patch | 28 |
2 files changed, 69 insertions, 0 deletions
diff --git a/sci-chemistry/prekin/files/6.51.081122-Makefile.patch b/sci-chemistry/prekin/files/6.51.081122-Makefile.patch new file mode 100644 index 000000000000..5fd9d00d9b06 --- /dev/null +++ b/sci-chemistry/prekin/files/6.51.081122-Makefile.patch @@ -0,0 +1,41 @@ +diff --git a/Makefile.linux b/Makefile.linux +index 65a021a..3daacd8 100755 +--- a/Makefile.linux ++++ b/Makefile.linux +@@ -1,15 +1,15 @@ + # +-CFLAGS = -I/usr/X11R6/include ++CFLAGS += -I/usr/X11R6/include + + ifeq ($(MAKECMDGOALS),debug) + CFLAGS = -g -I/usr/X11R6/include + endif + +-LIBS = -L/usr/lib -L/usr/X11R6/lib -lXmu -lXm -lXt -lSM -lICE -lXext -lX11 ++LIBS = -L/usr/GENTOOLIBDIR -L/usr/X11R6/lib -lXmu -lXm -lXt -lSM -lICE -lXext -lX11 + + ifeq ($(MAKECMDGOALS),nogui) +-CFLAGS = -D NOGUI -I/usr/X11R6/include +-LIBS = -L/usr/lib -L/usr/X11R6/lib -lXmu -lXt -lSM -lICE -lXext -lX11 ++CFLAGS += -D NOGUI -I/usr/X11R6/include ++LIBS = -L/usr/GENTOOLIBDIR -L/usr/X11R6/lib -lXmu -lXt -lSM -lICE -lXext -lX11 + endif + + FIN = -lm -pthread #for RH9.0, ok for RH7.3 & RH8.0 +@@ -26,13 +26,13 @@ OBJS = PKINANGL.o PKINCRTL.o PKINCSBS.o PKINCSUB.o PKINCOUT.o PKINMENU.o PKINROT + # Commands specific to clients created by this Makefile + + prekin: $(OBJS) +- cc -o prekin $(CFLAGS) $(OBJS) -L/usr/X11R6/lib $(LIBS) -ldl $(FIN) ++ cc -o prekin $(CFLAGS) $(LDFLAGS) $(OBJS) -L/usr/X11R6/lib $(LIBS) -ldl $(FIN) + + debug: $(OBJS) +- cc -o prekin $(CFLAGS) $(OBJS) -L/usr/X11R6/lib $(LIBS) -ldl $(FIN) ++ cc -o prekin $(CFLAGS) $(LDFLAGS) $(OBJS) -L/usr/X11R6/lib $(LIBS) -ldl $(FIN) + + nogui: $(OBJS) +- cc -o prekin $(CFLAGS) $(OBJS) -L/usr/X11R6/lib $(LIBS) -ldl $(FIN) ++ cc -o prekin $(CFLAGS) $(LDFLAGS) $(OBJS) -L/usr/X11R6/lib $(LIBS) -ldl $(FIN) + + clean: + rm *.o diff --git a/sci-chemistry/prekin/files/6.51.081122-overflow.patch b/sci-chemistry/prekin/files/6.51.081122-overflow.patch new file mode 100644 index 000000000000..27bc01d61a52 --- /dev/null +++ b/sci-chemistry/prekin/files/6.51.081122-overflow.patch @@ -0,0 +1,28 @@ +diff --git a/PKIN.h b/PKIN.h +index 6cb6670..c9c6b89 100755 +--- a/PKIN.h ++++ b/PKIN.h +@@ -533,8 +533,8 @@ EXTERN float xnext,ynext,znext,onext,Bnext,Uvalnext; + EXTERN char aspectstrnext[MAXaspects+3]; /*in parens: (XXXX)*/ + + /* possible overlap with earlier PREKIN variables */ +-EXTERN char word[256],texts[256],temps[256]; +-EXTERN char alertstr[256],alertstr2[256],alertstr3[256]; ++EXTERN char word[256],texts[256],temps[512]; ++EXTERN char alertstr[1024],alertstr2[256],alertstr3[256]; + EXTERN char oldstr[256],olderstr[256],newstr[256],InfoStr[256],MolNameStr[16]; + EXTERN char NameStr[256],OutfileStr[256],ScriptinStr[256],ShortNameStr[256]; + EXTERN char DirStr[256],PDBfileStr[256],helpoutStr[256]; /*040425 helpout*/ +diff --git a/PKINCOUT.c b/PKINCOUT.c +index af8eb24..a9f3a5f 100755 +--- a/PKINCOUT.c ++++ b/PKINCOUT.c +@@ -17,7 +17,7 @@ static float VRMLx=0,VRMLy=0,VRMLz=0; + void writeoutput() + { + char cntl[5]; /* 4 actual characters */ +- char kol[20],extra[256],aname[13]; ++ char kol[20],extra[256],aname[32]; + char chain[32],atoms[32],cpks[32],hygen[32],hbond[32]; + char subname[32],allstr[32]; + char mastername[32]; /*051128*/ |