gentoo resync 08.09.2018

4 files changed, 9 insertions, 90 deletions

diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild
deleted file mode 100644
index 4c953dd73e3c..000000000000
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-if [[ $PV = *9999* ]]; then
-	scm_eclass=git-2
-	EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
-	EGIT_BRANCH="develop"
-	SRC_URI=""
-	KEYWORDS=""
-else
-	scm_eclass=vcs-snapshot
-	SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
-	KEYWORDS="~amd64 ~x86"
-fi
-
-inherit eutils distutils-r1 ${scm_eclass}
-
-DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://orbeckst.github.com/GromacsWrapper/"
-
-LICENSE="GPL-3 LGPL-3"
-SLOT="0"
-IUSE=""
-
-DEPEND="
-		>=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
-		>=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
-		>=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
-		"
-RDEPEND="${DEPEND}"
-
-PATCHES=(
-	"${FILESDIR}/0001-Drop-chmod-hack.patch"
-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild
deleted file mode 100644
index dc2488dd3b95..000000000000
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-if [[ $PV = *9999* ]]; then
-	scm_eclass=git-2
-	EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
-	EGIT_BRANCH="develop"
-	SRC_URI=""
-	KEYWORDS=""
-else
-	scm_eclass=vcs-snapshot
-	SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
-	KEYWORDS="~amd64 ~x86"
-fi
-
-inherit eutils distutils-r1 ${scm_eclass}
-
-DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://orbeckst.github.com/GromacsWrapper/"
-
-LICENSE="GPL-3 LGPL-3"
-SLOT="0"
-IUSE=""
-
-DEPEND="
-	>=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
-	>=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
-	>=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
-	"
-RDEPEND="${DEPEND}"
-
-PATCHES=(
-	"${FILESDIR}/0001-Drop-chmod-hack.patch"
-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild
index 3e946ea31dd4..55ff025bcf66 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild
@@ -1,26 +1,26 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
 
-PYTHON_COMPAT=( python2_7 )
+PYTHON_COMPAT=( python{2_7,3_5,3_6} )
 
 if [[ $PV = *9999* ]]; then
-	scm_eclass=git-2
-	EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
+	scm_eclass=git-r3
+	EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
 	EGIT_BRANCH="develop"
 	SRC_URI=""
 	KEYWORDS=""
 else
 	scm_eclass=vcs-snapshot
-	SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
+	SRC_URI="https://github.com/Becksteinlab/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
 	KEYWORDS="~amd64 ~x86"
 fi
 
 inherit eutils distutils-r1 ${scm_eclass}
 
 DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://orbeckst.github.com/GromacsWrapper/"
+HOMEPAGE="https://gromacswrapper.readthedocs.io"
 
 LICENSE="GPL-3 LGPL-3"
 SLOT="0"
@@ -28,7 +28,6 @@ IUSE=""
 
 DEPEND="
 	>=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
-	>=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
 	>=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
-	"
+	dev-python/six[${PYTHON_USEDEP}]"
 RDEPEND="${DEPEND}"
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 5ce00a7c0188..ae9d72746d05 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1,8 +1,4 @@
 AUX 0001-Drop-chmod-hack.patch 863 BLAKE2B 974af7be159438f5afdaab56ec92be293396bb3dedd64a759af53634905ff24b46acdac29bdf1046ddda25fac8850f9e66691e8bf03464e2de0975922b9e7090 SHA512 d37a73ca6ecd54c149699177cd10af9782a7ee48c77911a027705728f76a1631f71b37d0263285373877c2e5db8b00dcaafd3e1d6a8dd7d62b1253a905fc5d58
-DIST GromacsWrapper-0.3.1.tar.gz 1575486 BLAKE2B 3ffb89f1e2facc281c58b48e1acf50fe14d2f0e095ac59a1fc9a571118926fa3d054bfc3ee1debdc46f7ec09fcd60944de460933048d6cc9f10d0411bc246c1a SHA512 655dae431bf575963af58a5f75abe6703fe1ecdddba5839b671d9237ddee0e33ab19b528e89bcba4db9063fe30622d44e8f47c7b6452b4d1eed8c7400873a012
-DIST GromacsWrapper-0.3.2.tar.gz 1592147 BLAKE2B 5b04deab9ab8f19f4fee9c7f0d1a614e64996635a5c8923e2271f26dc3ff7a03886a0306199e894b48267adc8dfc2dd853aeb37860007b27edd2d0c2424a7b35 SHA512 a9e0abb5e7ad0c6831e23b6a8c09c6e4cc74b33d66cd17df8e00b876dc275dda11c3d3723565d8d58c45bdf6b2b00323bf85e24e2d5324a8d8b597cc3e5d78a4
-DIST GromacsWrapper-0.5.1.tar.gz 1247839 BLAKE2B acab6411167c68fe8e1761418ab6f96918fa0eda91a2de15ccebacaf47e7352455576b2666982c25f5a6af4f10a443b4f20a6887998b68f12b13e1cfb4b8e838 SHA512 43b6b47e24cbb118492495370b165eb4b0e7672ba4e1c868d3039a0ad0b9828058f30ab7344118c7b0e7dd166ac325ea2b3483bd28b8f65dd972a101a5b9facd
-EBUILD GromacsWrapper-0.3.1.ebuild 848 BLAKE2B cfc7cfc4153f12a8bce73ab447b465b0659de54fabc9d1ceb61300d562e93386dbef8200b00e32f05501fc4f09a0cd4f18019641e198dd4ba619bc4c280cefd4 SHA512 0bf92353d341f72ab5dee745cae125329032fb9109524d9a388853b8a6c8ff425da8d7a806f98a9d5a5ce6d29646c5755d39e4ab18815429b58b987eb06e5ce0
-EBUILD GromacsWrapper-0.3.2.ebuild 844 BLAKE2B f1ebc15f0b1cbbeec8f963b651d9c25e51056d307f5b2548bc50e26e13914181e6f3a2187c53865b6325bf65c07e1cc4c401d76a1187f11f8d61739b47629573 SHA512 84d8ca613fd783ea77f916ae44390bed18d36a445ef06abfdfc7c9f413eb05a00a6b4c35706d78eef0cae209343e6c7246270dfd2d3d682f028b56ef00fbd057
-EBUILD GromacsWrapper-0.5.1.ebuild 789 BLAKE2B 5cc2a80e07eb20bcd463239f3990f31a115ba241f4a572114fb7aace02d5d43b2c42835761fb12d8b6b912ba882afb690124e73c14c9ccd4ce19c6f117003c15 SHA512 47a145cee1780f80a90a289d29d795141ff1a7d98a443b3fedf44bd173358e1a86b04ec2c72118faa9f715484973c15877e1bc92696ab65f84ecf1dd3f3f98ca
+DIST GromacsWrapper-0.7.0.tar.gz 1177718 BLAKE2B 88515b14ce85ecdf0323c3e4a68ac702cfc14569508be015fafc8192174af792507f6d10935aed2f969417ad34d5a1216688e9dce2f6dc6fc47529b87572d229 SHA512 74f6c5b84556b79ced128e48bf111cc40306b8854c8fcf53cab8f2fcf2dce56367e075c116f50aa1aa0947c83af0641bc78045e7d5035f2a8813f9709edce097
+EBUILD GromacsWrapper-0.7.0.ebuild 791 BLAKE2B 37fc7272107e139932930627ecaacebc074addcb0cf6208835d9034b18d6ba9012fa94ce27662f3f71d7baa7c2b44fc2f7a7b99553378bfa17f641087b76ec33 SHA512 d98ee09bc0326207469eb832bfdf3fc61fc83b526ade01994c17bd4cd37313f42913f6bf62665e3834eaf12231e176887192bfb6d709edbb7b547152464a65d2
 MISC metadata.xml 478 BLAKE2B 43348f9431c7456df96e838aeea11d6e3ce3c4c38c796d0746cd249f167e9a55fbd57c3e8d7b731facd530492e14ff165c54fc4c97facddba948dd02a2c4bd2e SHA512 2214eed914af825f9ab83c1de633c00cf2d3f39ad9f88dde4b21264856e3f7ba960fcacf512d0308f6d351857c76a8ad5aa494988c3c03bfd172a233a7f3207a