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authorV3n3RiX <venerix@koprulu.sector>2023-06-09 21:49:23 +0100
committerV3n3RiX <venerix@koprulu.sector>2023-06-09 21:49:23 +0100
commitb8cc45d2d4557cadf73e3411149ffb57ebd8c09b (patch)
tree36e9e50b71907f13105d2d76cda896f2097f8201 /sci-biology
parent60010a4cd6d7c12aaa62f00b5e8a158ed24efba6 (diff)
gentoo auto-resync : 09:06:2023 - 21:49:23
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/Manifest.gzbin19479 -> 19485 bytes
-rw-r--r--sci-biology/augustus/Manifest2
-rw-r--r--sci-biology/augustus/augustus-2.5.5.ebuild4
-rw-r--r--sci-biology/bioperl-db/Manifest2
-rw-r--r--sci-biology/bioperl-db/bioperl-db-1.6.9-r2.ebuild4
-rw-r--r--sci-biology/bioperl-network/Manifest2
-rw-r--r--sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild4
-rw-r--r--sci-biology/bioperl-run/Manifest2
-rw-r--r--sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild4
-rw-r--r--sci-biology/bioperl/Manifest2
-rw-r--r--sci-biology/bioperl/bioperl-1.6.9-r1.ebuild4
-rw-r--r--sci-biology/biosql/Manifest2
-rw-r--r--sci-biology/biosql/biosql-1.0.1-r2.ebuild4
-rw-r--r--sci-biology/clustal-omega/Manifest2
-rw-r--r--sci-biology/clustal-omega/clustal-omega-1.2.4-r1.ebuild4
-rw-r--r--sci-biology/clustalw/Manifest4
-rw-r--r--sci-biology/clustalw/clustalw-1.83-r4.ebuild4
-rw-r--r--sci-biology/clustalw/clustalw-2.1-r2.ebuild4
-rw-r--r--sci-biology/clustalx/Manifest2
-rw-r--r--sci-biology/clustalx/clustalx-2.1-r3.ebuild4
-rw-r--r--sci-biology/eugene/Manifest2
-rw-r--r--sci-biology/eugene/eugene-4.1d-r1.ebuild4
-rw-r--r--sci-biology/finchtv/Manifest2
-rw-r--r--sci-biology/finchtv/finchtv-1.3.1-r3.ebuild4
-rw-r--r--sci-biology/glimmerhmm/Manifest2
-rw-r--r--sci-biology/glimmerhmm/glimmerhmm-3.0.1-r1.ebuild4
-rw-r--r--sci-biology/infernal/Manifest2
-rw-r--r--sci-biology/infernal/infernal-1.0.2-r1.ebuild4
-rw-r--r--sci-biology/mothur/Manifest2
-rw-r--r--sci-biology/mothur/mothur-1.27.0-r1.ebuild4
-rw-r--r--sci-biology/muscle/Manifest2
-rw-r--r--sci-biology/muscle/muscle-3.8.31.ebuild4
-rw-r--r--sci-biology/pals/Manifest2
-rw-r--r--sci-biology/pals/pals-1.0-r2.ebuild4
-rw-r--r--sci-biology/phyml/Manifest2
-rw-r--r--sci-biology/phyml/phyml-2.4.5-r4.ebuild4
-rw-r--r--sci-biology/piler/Manifest2
-rw-r--r--sci-biology/piler/piler-1.0-r2.ebuild4
-rw-r--r--sci-biology/pilercr/Manifest2
-rw-r--r--sci-biology/pilercr/pilercr-1.0-r2.ebuild4
-rw-r--r--sci-biology/probcons/Manifest2
-rw-r--r--sci-biology/probcons/probcons-1.12-r1.ebuild4
-rw-r--r--sci-biology/sibsim4/Manifest2
-rw-r--r--sci-biology/sibsim4/sibsim4-0.20.ebuild4
-rw-r--r--sci-biology/stride/Manifest2
-rw-r--r--sci-biology/stride/stride-20011129-r1.ebuild4
-rw-r--r--sci-biology/tree-puzzle/Manifest2
-rw-r--r--sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild4
-rw-r--r--sci-biology/treeviewx/Manifest2
-rw-r--r--sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild4
-rw-r--r--sci-biology/trf/Manifest2
-rw-r--r--sci-biology/trf/trf-4.04-r2.ebuild4
-rw-r--r--sci-biology/uchime/Manifest2
-rw-r--r--sci-biology/uchime/uchime-4.2.40-r1.ebuild4
54 files changed, 81 insertions, 81 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz
index 8f49144101ac..3af3124bbc9c 100644
--- a/sci-biology/Manifest.gz
+++ b/sci-biology/Manifest.gz
Binary files differ
diff --git a/sci-biology/augustus/Manifest b/sci-biology/augustus/Manifest
index f6d9d647aba0..759691acff14 100644
--- a/sci-biology/augustus/Manifest
+++ b/sci-biology/augustus/Manifest
@@ -1,6 +1,6 @@
AUX augustus-2.5.5-sane-build.patch 5271 BLAKE2B 1ba799aa4d9611087f1455f334dc35616979267bb546aa2ab16f6c8d3d528af84373da482840b455d4d0f0374af24cc3010f6925d4a93c0eb7abe524544fd408 SHA512 5afe12b51b8ce27ef32e8e66dd72be451022757228b4c86dec938b26870885bee06712438a22801a42944d2def8ae8bf4a2d7fdb82e12455c145abcd6f0c4aa1
DIST augustus-3.4.0.tar.gz 221652100 BLAKE2B dfc8c98107f5a955f688f3d2976ca936faf2ef7004095f6b9d7c1902a36ca5d3c9aef59cab1b82b56cd5c2abc7b67195c5030111ed68557d53128814b1bf6bab SHA512 ca1df1016589f55527a883429edd5024cbc32c1b32036c81f9df5e0967a7d194f5b7a82109e924f380627427d9731caa478e63cad8cd804c01521aed76d8c4a6
DIST augustus.2.5.5.tar.gz 70826249 BLAKE2B 3f3f1537c5c614f00298e1835eeb7bbe968987c3e0dee13299e1e26b4abf198d8635a93121b11722d2c90b63ff54cf153c72716d01c3ca033481bb54357b7bcf SHA512 33eb05d5c90200d2fc17026743d3a25e73aa3e217b8546f0bed4c94bcb460597d853377a67896e52e45ead5d736d13ed3b2c91b31fed8216da2920c825e8c20f
-EBUILD augustus-2.5.5.ebuild 910 BLAKE2B 5cde42582b4873dbaabe4457a4b7b4f5305b928cbfd7afc3c067cbeb3ea042e82faa56810b4f72078d57f7b0ecd4c96eaa30cfde5ef73d67c26fd05d0035d84e SHA512 03103b4d5cec5dfd46971f1a089d0c02d3cc5ecf7647ee5589e8e297b3f60689c2c763b8c8f2137becfa0e11c0e3c7977186c466085c3065f88eaf5a469bcb9c
+EBUILD augustus-2.5.5.ebuild 911 BLAKE2B 92c56fcf261b64393440c92e0f01b9dae018e082b4addb5759cbfc807183944059775a8482fafcba5c3dc3fc4ca7568c93bd4be546b65a0bc446028a537c71f6 SHA512 a54cc943fa343179edb7d21c9cd841672d6abc548e5a2c6b56c054b85bd64684dc7bf145110c6eb51788d600a37bfcad60e8f4d8c982aa92213ee75ed95cc963
EBUILD augustus-3.4.0-r3.ebuild 1033 BLAKE2B 52d45534a5f9cc900d3a048926046fac00016a16f6dd8d65b530c24d99a0873ebdb177eff3d83ed74cb3cd6f1660a17ff0349217d073893d351d31b5ccfbe1d7 SHA512 6a0a337b6c4376412b7184fc6303b4c18da80936d8228ac35c8a106ab2e2070a2c998ee3ce28e2453275eeeecc82c7b4be4bdc0a031b5b47c820e6e76db5a867
MISC metadata.xml 360 BLAKE2B a2a37a6ac8535c7c1e48711fe6f330bddc6057a445afb33bced10e3137255bbe647d85a1c300af4cc802c2fdaa4a6d4ee169e82778ba4437e60824daf2485633 SHA512 7f3cc43067ed98c6fee8302eff2855b3594c2adc3e81d72c27aa20bd9e4477401607a4424e93368a3e501bcb90a44106bebdffd2ca0069e94b3b5d3e5fc2156e
diff --git a/sci-biology/augustus/augustus-2.5.5.ebuild b/sci-biology/augustus/augustus-2.5.5.ebuild
index 5bf36e85cb9b..ed345330c4a7 100644
--- a/sci-biology/augustus/augustus-2.5.5.ebuild
+++ b/sci-biology/augustus/augustus-2.5.5.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2019 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -11,7 +11,7 @@ SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.tar.gz"
LICENSE="Artistic"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE="examples"
S="${WORKDIR}/${PN}.${PV}"
diff --git a/sci-biology/bioperl-db/Manifest b/sci-biology/bioperl-db/Manifest
index c9a9fdd4e8f8..0c5363d08341 100644
--- a/sci-biology/bioperl-db/Manifest
+++ b/sci-biology/bioperl-db/Manifest
@@ -1,4 +1,4 @@
AUX bioperl-db-1.6.9-db.patch 1567 BLAKE2B 40a1ba874e745630d886d0531ab90385bb2207073bebc823c52f595fa4752b0b9bf310adf7148ba4c7c5c1ec19ddec226d28a34311c932a0f37da6af1c0dd422 SHA512 a0a2ca951645b70b2e4eb3390598b2a42d6631109500238d6fc482d97a616ec1881738e5dc9af118d37fdf50657916ff275124f409510cf15515dfbc829766c0
DIST BioPerl-DB-1.006900.tar.gz 492799 BLAKE2B fb923533ecdb74e868a3aef0c0c6ba8da419ae3c0e9d2e8c55297aad15563b135b6b00fd158481b31dcacd1125f7e10a557052bd4b04eed3a400c972653ff757 SHA512 e06b8b9aa4188a83128f910d7b4a031f69d36f75e4f2d7210357366379024ef39b58eca97112b5b419f141c82b7518086273cc97c9637382ee5e0ddb9ce28746
-EBUILD bioperl-db-1.6.9-r2.ebuild 2351 BLAKE2B 338fef5e883902619f1c369fa2ca450711aefe5ac49d16e210242703fe665ee0e7ed9b13e50f02a1d7e866b39bc954f6e163f549f5d4966ee389c320ee550047 SHA512 b481726e1b72f3874449b3a97f9309839658f825ecf39eff4f2f019efa62f696b73e878aceec99fc4e434446f8a92cb4e9267d82f631b301ab4c399fcecf2b08
+EBUILD bioperl-db-1.6.9-r2.ebuild 2352 BLAKE2B 77d3d4f1ce2804f271e7b1192a7f3ac66c373b04e2bc31578f3b18a291f598a00f318d1b9edf465b175c61b3749bb9989d1ec6dfab3e47cf3c16998337f61477 SHA512 36cffa1e0d2266b17a9d0c756923e87df3d4d85eae2b5695f06b1e4d7c9415380d7040b928c5c3e931d073d1d5d335782170bbc063301a47f70b7920fbfa8a00
MISC metadata.xml 345 BLAKE2B 3bc3614e7030d42358f8c616b364d20788507eb62fdb72b9c581bf6ae7629bd1d258a8ff97de8e09e28e83217d88cecb53744c1d36892da04ec264db93287d12 SHA512 e543c3388ae8594a533eb55919e4cff9fbcefef82b043c151c9c1d0732918803a2811c0c3352684483fa0e5494f6559f864a9d453300c790fb4cafc765a418d5
diff --git a/sci-biology/bioperl-db/bioperl-db-1.6.9-r2.ebuild b/sci-biology/bioperl-db/bioperl-db-1.6.9-r2.ebuild
index 6359865b90e0..435dc4a67173 100644
--- a/sci-biology/bioperl-db/bioperl-db-1.6.9-r2.ebuild
+++ b/sci-biology/bioperl-db/bioperl-db-1.6.9-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -15,7 +15,7 @@ DESCRIPTION="Perl tools for bioinformatics - Perl API that accesses the BioSQL s
HOMEPAGE="http://www.bioperl.org/"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE="test"
RESTRICT="test"
diff --git a/sci-biology/bioperl-network/Manifest b/sci-biology/bioperl-network/Manifest
index 7559088328af..a1e240f63a92 100644
--- a/sci-biology/bioperl-network/Manifest
+++ b/sci-biology/bioperl-network/Manifest
@@ -1,3 +1,3 @@
DIST BioPerl-Network-1.006900.tar.gz 2198089 BLAKE2B 67197ed356f642d9e85f779019f6854f4baa3963e059895b89c75ae56f8b5a075ca04b04ce5c7622d46a3a2f55e1c7d80af695085c607ed7fda5517c71c579f3 SHA512 d0a95af17cb024cbc615c784f1dbcddd7bfc5b54524163ab127f1077ded18df222fe067c085f3dd17dd416d6417b8f726526be164e1e33144991393f6b6d5842
-EBUILD bioperl-network-1.6.9-r1.ebuild 554 BLAKE2B a569458f835cfe5950784aad33b8b3dc5330ef7e81036215354fec4f57c77142c3879c5d9e706ad8278d7651ff50a15f278bba67a58a846408197fbaf225eae1 SHA512 3e8e84fb53f91ff2c752c07af5e739dfc9f68e9142557d3914c17f553a702540d20b6642fdd8a382694f958fb75ca00628426cbe4c0a017b43203ee11ba63d99
+EBUILD bioperl-network-1.6.9-r1.ebuild 555 BLAKE2B d4f96473c29b041f89109bb12147ecfa35f9ddd7b4201f434ace407cf58ac2ec705c5d66e22e13d70c4070d54a9825978788938de6febde4da0d4f116df21ba7 SHA512 5cbf416ba3d964c1d9508d2818551a14026b4668f6fa5f3cfdd160140dd1aedb89e69df90fa6813fb4a2b527da6a12c7284b414a121f134b36ab011a91ddeb65
MISC metadata.xml 350 BLAKE2B 3ed0b50a1cba8de14da5b9a7c73e9b4ae75ab71a4065e950115d0fbe29ca948e23597ecd14e921f64a22ccd023a991c1f8eb8e6571c7fa6280116664f9e6f6c1 SHA512 ef397b00868ba21c8718958189efd201deb6316ed7030cc07547cee07c20b98af13c57f778e39835abc9dbbd6898a497e2a371bb3c0803fbf06bfdf44ea2b90f
diff --git a/sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild b/sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild
index 513429a9e292..fc51a12da036 100644
--- a/sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild
+++ b/sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -14,7 +14,7 @@ DESCRIPTION="Perl tools for bioinformatics - Analysis of protein-protein interac
HOMEPAGE="http://www.bioperl.org/"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
RESTRICT="test" # bug 298326
RDEPEND="
diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest
index 6ff8fd52a6b7..9ff30c818cc7 100644
--- a/sci-biology/bioperl-run/Manifest
+++ b/sci-biology/bioperl-run/Manifest
@@ -1,3 +1,3 @@
DIST BioPerl-Run-1.006900.tar.gz 14546677 BLAKE2B 9faf58796b9874b19b66e74abc51ed1d1b6e2928bcf9904506b2af6b2b7c1772a90eab24bf0e7c050fd4a2b120ba506ad5edb8a693496b7468fe7c8d05d11f0a SHA512 47f2b853885c604291ac0aba3269b897de59cf7da6f7d54a50ff950cca836338091309df550f32695159c620be23391306d0421d2bbc22eebbb61a9e280ad83c
-EBUILD bioperl-run-1.6.9-r1.ebuild 650 BLAKE2B a214f71456de9391214b0a7f34dadf26613c9879e395062b5e48af26692a3d252c07527cd05ced889a6b9a03ba06d61b19362d936e9d984753b898bdc6bdbd70 SHA512 be72eba0015551c616680ecc1f623d3818f48a6bef98532c90f2abca325952c16dd9be8ded66bc9e5ff89c70345d343cb9f7e40c7594995ab286ad5e2b3eb64d
+EBUILD bioperl-run-1.6.9-r1.ebuild 651 BLAKE2B 551f61c4be76c6e77b74aa87c0d831ff182f1fd552137540e65daade1ecce7f017d7166727140bc936530aa7b637fc9bb012330fce0141b2b91001bb18da9fd4 SHA512 6ecd3b654f1172890b14024dc07033486866f6b604d59d31053507235f7cd8e7b4758c18c3990fa5c0165993d4546ae0644931a1b44513ae4e3f28687162b51c
MISC metadata.xml 346 BLAKE2B 95f61e91a850b29694d458a88cca4d4594bc307c3ff2f3987b8da6d0d1344cb00f9c8d0c2657b35adc167887cc75340808a3637f571bdf4de12d52f92b87bae3 SHA512 2ffa2072f142a304c63e4b2403eaf1f65fcf61aee9798c08c896ccab9569fa90926c83652589190a2ba60170fff20ccc106e0b8397fe7e8d3519cce4064ed000
diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild
index 2541aab82506..9c32c7eaa5f7 100644
--- a/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild
+++ b/sci-biology/bioperl-run/bioperl-run-1.6.9-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -14,7 +14,7 @@ DESCRIPTION="Perl wrapper modules for key bioinformatics applications"
HOMEPAGE="http://www.bioperl.org/"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE="minimal test"
RESTRICT="test"
diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest
index f90a88626a90..0752f1f35d7d 100644
--- a/sci-biology/bioperl/Manifest
+++ b/sci-biology/bioperl/Manifest
@@ -1,3 +1,3 @@
DIST BioPerl-1.6.901.tar.gz 12284856 BLAKE2B 004947fde9d02355ac96f71b67a33a27d6d0163892c978ac9059e70e089fb83b473e21252c5217dfba8faaa65bc3d2eebb8826d03f29a13409e2b6d337316b42 SHA512 227387437c940da1435ed83fad6ec2168ca12a729c90dc557e84750c6474213874c23a8f23e50db4027909469627baee581faa11be6208c8e0a5453a01c7eca4
-EBUILD bioperl-1.6.9-r1.ebuild 1488 BLAKE2B 7a8ad3ad21b292fed0453d9965694aad7f383539f4ff2a689c26c0ff129e8a3d40a8fced69222423e39344e947fb58489620b34fb6bf904f1d4bc6747aa53d42 SHA512 2c41a0018ec7f11f3f45a9c2b003921a88e7205b22ac82fd4255267e825080e5f0e8bd1adb2b86b3c204eafb8920bad4ac9f34b4a100b71103469fb1dd46a9e3
+EBUILD bioperl-1.6.9-r1.ebuild 1489 BLAKE2B 8f09d16400f32d2dc8714e3b83da65af4e57ca84f444536100d8c2c826d326ba4043e14926fdeab66f2248bb391cef9e149c0f5494d964c15bf33acd9cc68ad9 SHA512 d171097738607995329d8bbdab052d0988d4a56fa028c79f1a395acf64405ad0123423a4cdd91d6e28b7bed4770c23dcb2e7d56e408e5cf1f03a98d4fd6029bd
MISC metadata.xml 575 BLAKE2B 0aee3e1be6aa5514054d2a81b42cf8f6642defbd103b3f61135da6a7dcf3ca1009047a14624fa0b58bec932eea6a764bd635cd4e1e1435d853d638a6f7176e9c SHA512 82a09cbc517100b42a9239cab0a5e8ae4589256889cbcb15cadc6606f76cf02e3570f6145bc7f1ea6ab73966e810a35ade22df4025929cf14417e452352e1dfe
diff --git a/sci-biology/bioperl/bioperl-1.6.9-r1.ebuild b/sci-biology/bioperl/bioperl-1.6.9-r1.ebuild
index 2896271e137a..a692fe812401 100644
--- a/sci-biology/bioperl/bioperl-1.6.9-r1.ebuild
+++ b/sci-biology/bioperl/bioperl-1.6.9-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -15,7 +15,7 @@ DESCRIPTION="Perl tools for bioinformatics - Core modules"
HOMEPAGE="http://www.bioperl.org/"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE="minimal graphviz sqlite ${SUBPROJECTS}"
REQUIRED_USE="minimal? ( !graphviz )"
diff --git a/sci-biology/biosql/Manifest b/sci-biology/biosql/Manifest
index b01dc8d040fd..8861ccd1ca13 100644
--- a/sci-biology/biosql/Manifest
+++ b/sci-biology/biosql/Manifest
@@ -1,3 +1,3 @@
DIST biosql-1.0.1.tar.bz2 253516 BLAKE2B d2b0d6c3f03389fbcf9dfca823b02c611b63d4c1ee1356150f92bb8c14c534d988644253fd1a6ed6522b8d2d06cacf7b21d7a9e9fe7b9464704497e7f976b283 SHA512 2e1fef6ab9b4386f146910937700f9108f8ef266161b7adfbbc52c0011eebc84716637c897a01a399ff39b066ff0a5905ba3fa27e7b41f53a87baf58d5b32695
-EBUILD biosql-1.0.1-r2.ebuild 983 BLAKE2B 01978ad51480c8fad57d48ce108583832a9d8eb12b5fed010784d6c4760589bc6840fe3d57bf8979ad750be737220ed7b6f21188f6304710f5075dac30740961 SHA512 b241af21b076ee4df162a9ed8927cc6fb16f46e143103dd388426b7adbc4b7f10d04fd54caa93edbce72e4b3a379fd06a0ca7042f6d24b8741204d9d05e56059
+EBUILD biosql-1.0.1-r2.ebuild 984 BLAKE2B c67cedc71b92e782fb8bd7cad79df71ee1c308c9c06b6aa7cfd6e488fb1f9102ccdba88efa08b16bd120809cdf1058a20351e9959d0dd686644fca8a826a3b0d SHA512 9ecf56d4ce875a0b3fffbcb68cb24e75fc91f7a6837071f72a4e4692670487272aafdb98cef97042ff45a0298e16e7534c425134110dbc87321e3ac8e460cba5
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/biosql/biosql-1.0.1-r2.ebuild b/sci-biology/biosql/biosql-1.0.1-r2.ebuild
index fd42d5e58a9a..838f3b443ed8 100644
--- a/sci-biology/biosql/biosql-1.0.1-r2.ebuild
+++ b/sci-biology/biosql/biosql-1.0.1-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -9,7 +9,7 @@ SRC_URI="https://biosql.org/DIST/${P}.tar.bz2"
LICENSE="LGPL-3"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE="mysql postgres"
# WARNING: bioperl-db is claimed to be incompatible with >=postgresql-8.3 (see INSTALL)
diff --git a/sci-biology/clustal-omega/Manifest b/sci-biology/clustal-omega/Manifest
index 8318d11f103d..d60c5b6fa734 100644
--- a/sci-biology/clustal-omega/Manifest
+++ b/sci-biology/clustal-omega/Manifest
@@ -1,3 +1,3 @@
DIST clustal-omega-1.2.4.tar.gz 1170516 BLAKE2B 0751a30a8d7bab2bac01980b84a28720e127dfeeec5b72f1826c8d9da4e84d5d9434b0f138b600155cc76f4385320913edb9bbdeb463ed757364feb3538f325b SHA512 b31514c30b412d731ee22c9020156b65a6a6cbc6fd51edc195d17b560935184bc070feeb58964c54df9eecdefb00e5a21ce859cb0ea69d92917f6bd8e93b819e
-EBUILD clustal-omega-1.2.4-r1.ebuild 543 BLAKE2B 23d251225ea265bf6407ca8fb6d87cae12ec3c564961241385b62e503294a6f112e33497a054d3578402395502fa64802d4a9556fa5fd29cc84e240477501bed SHA512 d139dca41c6b25c8e2c91ef29938b4d80e75e486ce967376cc77225424a3006c42c89bccabe6cd71fc57e62d8bc10c258e660cf663d66929229d278680c8d54e
+EBUILD clustal-omega-1.2.4-r1.ebuild 544 BLAKE2B def48d6cb0d9ae39646f25e456271e87b7392ca33eac405701e30e89eb9dd182020ce31eca4a1a3e018a83d8d1de66466065654fb394954807e23d49036ca127 SHA512 d9b559a4cecf0b1a4ee07293ab4afbf973d7d6be5a95316f6116647ec8fd48076a6f671b27a1776b95af76e6d85b0d6fd1e2db7dc94586c5c8d3105a27699fb8
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/clustal-omega/clustal-omega-1.2.4-r1.ebuild b/sci-biology/clustal-omega/clustal-omega-1.2.4-r1.ebuild
index 2a4a2c108fed..4d5b2a779bf9 100644
--- a/sci-biology/clustal-omega/clustal-omega-1.2.4-r1.ebuild
+++ b/sci-biology/clustal-omega/clustal-omega-1.2.4-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -11,7 +11,7 @@ SRC_URI="http://www.clustal.org/omega/${P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
DEPEND="dev-libs/argtable"
RDEPEND="${DEPEND}"
diff --git a/sci-biology/clustalw/Manifest b/sci-biology/clustalw/Manifest
index b02851cb1dc1..a8f698fb1939 100644
--- a/sci-biology/clustalw/Manifest
+++ b/sci-biology/clustalw/Manifest
@@ -2,6 +2,6 @@ AUX 1.83-as-needed.patch 800 BLAKE2B 37db9a8c0f7b5db47065f5c6e01cefc095363e30a5f
AUX 1.83-clang.patch 162 BLAKE2B b4ed2add1aaf33ef3d3138124377ed88bbe030b2e50f24e7dc87717fd06e3f76c6660c518d60083520f13b2349a1051a3981605e6130e0632e112212af345f51 SHA512 0e9aa3e61194f6d35449544c31693ee9f23ced8460b6ef4eca45b7f969867a6de04b898531e2749e65ee353547bd6fd3f19b7ee29d202ca30b5043567bf045bd
DIST clustalw-2.1.tar.gz 350761 BLAKE2B 479acb42ec0b0adee8e04e99132a782c947a1261f48e674c6a11e4f38e44e5709d03f0c864f0cd3cf7eb4faf76a36b6121c3e3d3573c86ee3895971df07f1a58 SHA512 659cfe0121015dd2b84578b1a0a7f016fc944de155686b9bdef31122200a21e792203f3a6ab93a31676a50ffb70858b506ceb7ac27d921189a8381dbe0887921
DIST clustalw1.83.UNIX.tar.gz 166863 BLAKE2B a3b1eabad8bc736cde4655f13fa8544759b7b5c50ea97fd45ee0be45ac6c361db5ced8ad21622ac2530b57c37c77dfd67657afd2c411acbfb7ff2a3ba014637e SHA512 c0cc9ebf4c8869be819065546b499b547990342c87425fae8f921a141704343f2a518ecfc2b8bfd527061902825fc5befcb2cd080c83ba887390e48338c9dc1a
-EBUILD clustalw-1.83-r4.ebuild 809 BLAKE2B 8641c9cd2b8e14b99bc6b59a5c90adc58682f209fd6a34b293d53dd167d9dc4152cc61c310fbf5fe7a7d3f17d8eb90aafc8e07f4865c7366805546bd1a31051d SHA512 9d56c56216a3d610f53ceaa64ca199825047337915959ea458ffc1adae11b83ae699bb35d041281accc917d0aa18ced1ffb0d6d765ee1c763115fcc0900361bd
-EBUILD clustalw-2.1-r2.ebuild 464 BLAKE2B 89efbdc8c9d83fc90e5ff611ae3f0f93c236c4d706048517a513bfe8e7d4ee22d7e996683ae4ffa404a91c2c984d1aaf2ca52167076b7155fe37a01c37f940a9 SHA512 e9f1cacef31985fa1b1b48d05d2bdbc21c54fb4d8bbd677bb742d03e811afbf0868d365f72d675e34b1fb798166db3678c437b2dd50a7f4bb68f37d349b48743
+EBUILD clustalw-1.83-r4.ebuild 810 BLAKE2B 720c484ba111b8f198581f7ec232793f40728f604fd773cfbc29dfcd258310ffc8ca97793eeb1d2b08e9c4052b464438b81d0bc390ebe650c73c01a7c01009e5 SHA512 6db7fa9e762e2631bc2fac8ea8028a5424a11050a74a97e4c3c2c6deaa621b76d2c7c50dd76aa8ce1f2c50a6094fb4559d7ca5eb4e00a737c2e24b103a20f0ea
+EBUILD clustalw-2.1-r2.ebuild 465 BLAKE2B 9e9bef107eddcbcd6b29a5a4f59b69132ea88440d8e0bda530a6739264deaf4ed1e336fe055a212e1fde5589eab6bd72a58862483d58c6ac533927956c2dff52 SHA512 a2d0dc84f8b7a5dd7ca093681017fea7611d2b1a0f5dc88c0e4b1949d18cbf7d9ae299e53bdd4980ac04711514f9d5f4a36098dacd5ea8e39ea848ca3c8583c0
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/clustalw/clustalw-1.83-r4.ebuild b/sci-biology/clustalw/clustalw-1.83-r4.ebuild
index fe20213ae7b5..23c4ba9a3229 100644
--- a/sci-biology/clustalw/clustalw-1.83-r4.ebuild
+++ b/sci-biology/clustalw/clustalw-1.83-r4.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -12,7 +12,7 @@ S="${WORKDIR}/${PN}${PV}"
LICENSE="clustalw"
SLOT="1"
-KEYWORDS="amd64 ~ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos"
+KEYWORDS="amd64 ~ppc ppc64 sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
PATCHES=(
"${FILESDIR}"/${PV}-as-needed.patch
diff --git a/sci-biology/clustalw/clustalw-2.1-r2.ebuild b/sci-biology/clustalw/clustalw-2.1-r2.ebuild
index 15c658788b5b..16a957f6c636 100644
--- a/sci-biology/clustalw/clustalw-2.1-r2.ebuild
+++ b/sci-biology/clustalw/clustalw-2.1-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -9,7 +9,7 @@ SRC_URI="http://www.clustal.org/download/current/${P}.tar.gz"
LICENSE="GPL-3 LGPL-3"
SLOT="2"
-KEYWORDS="amd64 ~ppc ~ppc64 ~sparc x86 ~amd64-linux ~x86-linux ~ppc-macos"
+KEYWORDS="amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
src_install() {
default
diff --git a/sci-biology/clustalx/Manifest b/sci-biology/clustalx/Manifest
index b6075e6ac694..8237f313332a 100644
--- a/sci-biology/clustalx/Manifest
+++ b/sci-biology/clustalx/Manifest
@@ -1,5 +1,5 @@
AUX clustalx-2.1-qt5.patch 8173 BLAKE2B dca2d4f7531ac38510cc9c2aa788244293c436940d38945c906c76b7a29d395179190833517c01cbe48d450111d3f115427fb55536ab55dd01fc0617ff9e7bc2 SHA512 d8c9e9e1aade86f6ba4aa88618ace305152b819cf445119c82b4d4e56c7923e25876c83fd74c8dc91715ce484ff0ea3111b13ed7d8219c1222ad60e09b72d29e
DIST clustalx-2.1.tar.gz 341649 BLAKE2B 43a740b278127d4745699a75479e422cc95a864bd55a9fe37eb68c0b36ae89e07848e8fdae2207ff9b3850eebc273b803df0261eefd3e7d96d8fa58c75af3adc SHA512 e8cbad783722161de6999ab01a91d555fc10db609197a8d2878f91e9d7dc998784c02d2ccb54c4936ee27b41321db6f4f37021221662f483b8b6d945b6e1c026
DIST clustalx.png.xz 74808 BLAKE2B 3e0b7ba5d0c4e1013a1ea0146460384279e7116cccde1abdd2e34de16867d83b88c0a04fbc64524e340611fdc5a5df4dbc73f10af610a43fae65c0907b7ac25d SHA512 0907710c944fc1b883c58501cd7bc2abbc5bf171495b58dbe9829d60d7c3530c210f89a5bfafc3cec03808ae50f5c9a78ce37b9175c2e37590494e115e8e343a
-EBUILD clustalx-2.1-r3.ebuild 1335 BLAKE2B 699de7fc342e8446cc26d4df33f4160f12a8db5296a3c7da5dbfd925d574888e9b29d6ebafa2ffe01b3f226d76294dc0757409b342bccfe03d85dbbb3e47409d SHA512 089251d547375351d37d244d52dd98b649f6e19cf985fa4f631c68aa8e59f760537d6209c84eac1a5bb2d6381931c21993dce8fd4a812efcbe80a04b3e8b4163
+EBUILD clustalx-2.1-r3.ebuild 1336 BLAKE2B 06a333b85b40abfedc034d2a9eb4133d2e49fa2e3a7ad18920cae45444d7e2d3f9d2ec364024ff54ce2c82f502c1ac5cff03c6d71eafae28251153820c65a001 SHA512 37f141b7c69300fbd920eecd8c54532c53f059c305f7bb1ad6b051c0e3bf22c25d4a3e87871d5f1e5bb891c512427b645506cecd76a8ae2ce8dbf53daad09882
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/clustalx/clustalx-2.1-r3.ebuild b/sci-biology/clustalx/clustalx-2.1-r3.ebuild
index bd9b57aabe79..fa956bd186e8 100644
--- a/sci-biology/clustalx/clustalx-2.1-r3.ebuild
+++ b/sci-biology/clustalx/clustalx-2.1-r3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -13,7 +13,7 @@ SRC_URI="
LICENSE="GPL-3 LGPL-3"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE=""
DEPEND="
diff --git a/sci-biology/eugene/Manifest b/sci-biology/eugene/Manifest
index 21120d84e544..6e45624f0ef7 100644
--- a/sci-biology/eugene/Manifest
+++ b/sci-biology/eugene/Manifest
@@ -6,5 +6,5 @@ AUX eugene-4.1d-clang16.patch 638 BLAKE2B 31ba74851ef79712e2583775c1cefc80035d4d
AUX eugene-4.1d-fix-c++14.patch 635 BLAKE2B d6e72bd7e4b80f21ebbc78cfc5f791fa23b0c22cd3414a5ecaaf50c54e1789625901bd0f9a5357f523de5dbca02d75229557d8a032f2e7cdd345e7dae3dbe19d SHA512 8ff6a8a2ee4b70b14d0fa9984c057307fe5b7d22e8a26969d82fb1ab7ee30a90cb3520ea8d3e16a59f09dfc46a3310cb43c621fabb31a39216209a4c3523e718
AUX eugene-4.1d-portable-getopt.patch 1433 BLAKE2B 8de256a490936a6c893c055917919a7cfc6a510675b4c12021d7cedb8a6cdf4aa73fb60d6ae4186b1df7abb784da09a9dc440464d8cbd90ac5d9ea758262391e SHA512 6a365eed393a27c080ec6f0eaa288a88e7909daa657637cb819aeb3e908934f8f228bd1026205402bc180e54c4ffe56be5ff5eedc95d3817b65da08774c9496c
DIST eugene-4.1d.tar.gz 7473965 BLAKE2B 537ba871b701a5c199791809f76ea883ff77fe768e27a69b95186ef82ab32cab9b5761405a9fadfeea9f58fe88cadce83bba4b1fa6cba5f4ede2347a516d1df0 SHA512 dab37930e211b3783954f6e4a762450760201b77e0b4214f16724516d9be583d0a7ec44a2f510e73f4370e9c2dc67a425456a057fdba8f51cb72386e16a26ef5
-EBUILD eugene-4.1d-r1.ebuild 990 BLAKE2B 3c00ecefa82adfd64bc57cc9f8ad89e09cb29a2bec5a4552b64bd7477173f56a4bdca24f2dc2001385bf45800f4c865ea7095f8b7e181c528fa4dbee26e11e40 SHA512 a6ba26dd315a52f65a2e7a501ad515caa6fa499ef560d4c5b2b94586a146c6b84852fdbe8f6fc662088b2a72597a9b45e7a7a20cbeca0ccc742033d25f181e7d
+EBUILD eugene-4.1d-r1.ebuild 991 BLAKE2B fb647b48a66e0db34918db999945b6958058638349c5ea0b574f493b140c58bc6c03531b79ea691e925a53e38a3bb89f339623af40a1c81482eb3d48550f215c SHA512 8fe7eb01bf02d960a62296a5b873c52dce23f24a12a36a951c9c7d6e8dca89e48f3aad845592f23b2cc3b4cbf00fad8c0da9d659ed06febe3d21c5d8d8c8b2f1
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/eugene/eugene-4.1d-r1.ebuild b/sci-biology/eugene/eugene-4.1d-r1.ebuild
index 40fb83ffc058..3800d7a2bdc3 100644
--- a/sci-biology/eugene/eugene-4.1d-r1.ebuild
+++ b/sci-biology/eugene/eugene-4.1d-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -11,7 +11,7 @@ SRC_URI="https://mulcyber.toulouse.inra.fr/frs/download.php/1359/${P}.tar.gz"
LICENSE="Artistic"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
RESTRICT="test"
DEPEND="
diff --git a/sci-biology/finchtv/Manifest b/sci-biology/finchtv/Manifest
index 9fda9c5c6d0e..b86632eebaf5 100644
--- a/sci-biology/finchtv/Manifest
+++ b/sci-biology/finchtv/Manifest
@@ -1,3 +1,3 @@
DIST finchtv_1_3_1.tar.gz 6706911 BLAKE2B 5aea60c2a107dc0d1d878b0416011f57bfcdb73b6e7c0da80be5b485ec5824aae7c610235057b74002765f5ab5e7bd250efec2a04a471b55abd046afc560ea38 SHA512 813217a6d44cbd60fff061da94f70adadcc803b77352b278246711bf1b952b592a0fdb6bfc9d74264d896cb816078e809bdc633981d4009c422f59f74aca5bc8
-EBUILD finchtv-1.3.1-r3.ebuild 718 BLAKE2B 565eac2d89a9cf378309957a0a10b3aaf5b61311cec1651dd69307541cfcf067433d686fad48c340b47bc609484c475ffff1c5c5dfd6da1f89b61a7f0f4ac130 SHA512 06dd522e0ea7b6f5501b31162022d7eb9e3b75f3b7c1688a6ce5222d1726212e9f6e484a832686c3dce2676a72d20f2446c6c8c953482b63a071309e3d285dae
+EBUILD finchtv-1.3.1-r3.ebuild 719 BLAKE2B 6a72672e6365d1d26f5839e92c6490ee742708833909b23249ba59bd9d1c9295f40e548e6a87170ebb109f35d3c05a7af913c3eca00adf4b8e30a02dba743169 SHA512 b5b10698f5d428c40ee0d44becea8be01172852aa5af622e3983b43f2e5a7fe827dc9923916e25521db6352c099919281f1faa0030eb6a807a54de4446a90830
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/finchtv/finchtv-1.3.1-r3.ebuild b/sci-biology/finchtv/finchtv-1.3.1-r3.ebuild
index 60608c9aff2a..d3634ac607b1 100644
--- a/sci-biology/finchtv/finchtv-1.3.1-r3.ebuild
+++ b/sci-biology/finchtv/finchtv-1.3.1-r3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -14,7 +14,7 @@ SRC_URI="http://www.geospiza.com/finchtv/download/programs/linux/${MY_P}.tar.gz"
LICENSE="finchtv"
SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux"
S="${WORKDIR}/${MY_P}"
diff --git a/sci-biology/glimmerhmm/Manifest b/sci-biology/glimmerhmm/Manifest
index ed259a54d26d..f0f760cdd059 100644
--- a/sci-biology/glimmerhmm/Manifest
+++ b/sci-biology/glimmerhmm/Manifest
@@ -1,5 +1,5 @@
AUX 3.0.1-gentoo.patch 4235 BLAKE2B 8263516018df83c39da08e906bcdbfb8445ef26c064a82d8edf547fba5b569921905dd32476a99726f1864cc24ec5464fbc48db55e08cca0b9555647dddae120 SHA512 e0350a4b604fe76462bbb7139264a9b2916c050c335589031bdca0cf0c6a653bbf84d9827f5c2096ff13f1007d4ef2e93698814758f787a98e4dd818be44bc3d
AUX glimmerhmm-3.0.1-fix-data-path.patch 512 BLAKE2B fc37954be58eaaec074fbb3ff9a8109907fc71be39365aa07e62c884a78c910d0ffcceaee907736107b56d97f0e7c9baf30f9fd71f239ede6cebe4bc9bcfb59e SHA512 0e1b65887a7a27c8d9adbf88a904ddbb4afc56e5052a6693ca57ae160bc9c6dab8589b633d364aead873fc1aaa671580bfc0deed9bde153f5069a0351244ef51
DIST GlimmerHMM-3.0.1.tar.gz 45475952 BLAKE2B 355f4e9f26c31167e0935de8012fa99a243838d0dd47e0e46ae4cb1df4eaf188a13fb365025bc4be82805c89f36f534a9907030515f96b9422340e9e966f4ea6 SHA512 15307d1982527bd83433882552cd3e12c76a65a2a119b6911a748dc801f80b1fc5732cb769a52e5c6281bdd48cf619a02edbd1b96ee40319fc620a3a7cdd82b7
-EBUILD glimmerhmm-3.0.1-r1.ebuild 989 BLAKE2B 7b411464fe1fd149ee78db9f067ff9c549854cf0ee8d572df30d0d03c3081bfe66c7ad26ad3051313909a51fc0ef0ac7e6e13f0ec378bf23929d2d4267d3b764 SHA512 1a55d81a6294016b4c90c952f49810ddf0a34f5b6b299f0040775a6a7cebe94aad5730d864143d4f09457b6616032fae2da3c893f47501d7c7effe60616a7196
+EBUILD glimmerhmm-3.0.1-r1.ebuild 990 BLAKE2B af2935449242c6324045c64c9a91a6d6f887891dcfbee89817c067c0c7a65792614f8244af428608f8d2b0fe5e4cc0939f56ef99b567ebfee678a2948f93bc5c SHA512 a17e8d42120751084bb2330ceb57d87b48dcb3e3e2222577f350a69a37777a38a3b9dd323bd055f7e8248b3c286021249577f43f895d0dd49fd4aa77dc624037
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/glimmerhmm/glimmerhmm-3.0.1-r1.ebuild b/sci-biology/glimmerhmm/glimmerhmm-3.0.1-r1.ebuild
index 5424e942a7f7..b6fc54eb65b1 100644
--- a/sci-biology/glimmerhmm/glimmerhmm-3.0.1-r1.ebuild
+++ b/sci-biology/glimmerhmm/glimmerhmm-3.0.1-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2019 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -13,7 +13,7 @@ SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/${MY_P}-${PV}.tar.gz"
LICENSE="Artistic"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
S="${WORKDIR}/${MY_P}"
diff --git a/sci-biology/infernal/Manifest b/sci-biology/infernal/Manifest
index 9bd728080ffa..e6ec5176113b 100644
--- a/sci-biology/infernal/Manifest
+++ b/sci-biology/infernal/Manifest
@@ -2,5 +2,5 @@ AUX infernal-1.0.2-fix-build-system.patch 3142 BLAKE2B e5869c089b158cb8c22bff849
AUX infernal-1.0.2-overflows.patch 540 BLAKE2B 1336442c3d1ef8a78d5d7a345bbbc3abf918d6edb0cef8fddcac32b9ece9f990464b3815592f564a05494a8b7c5c75e438349c384c29caa73c467e40f737db45 SHA512 c8bafb2c10d09cae24f882d5238b6ae974669d59e0ee583bcedb13e81c88ea9859c1f78343d5be91a5cca05a3dc07ffe6436b33e201a46baf349795da5eec906
AUX infernal-1.0.2-perl-5.16-2.patch 4206 BLAKE2B eb4309d31e874f395d20bded4c132fb8b811fe17b4af5c95bd56ade05e22e7bf45c08e67884ca339aa7a2e13b2ddc9bb9527cbddef9458ce8fe05b7bd4707e49 SHA512 9784f31c18f6c53b15c0454d3a41db27c3f433ac3d3030bc113e9f9e8194fb51109de5055d038a3c639b1c4142d6fd0010825df484a857c9f072f43d8cadcb44
DIST infernal-1.0.2.tar.gz 15205421 BLAKE2B 3570ae42feb96ead383c2f1c09d34b4719ae0a5ae8fa973fd02f9ea6e8935c81ab49c7db21dad2e20c1ae6ab6fb9514f12704bbf5917f15f6582effae480312f SHA512 0399be14c17f053574e95d8c5b9eaf990545795a9268e20f0940e11a8e78fc49beb4b23994e9ea427764fbb29e9b39f6da9cb1d85eb4b56d354057b48515c4af
-EBUILD infernal-1.0.2-r1.ebuild 886 BLAKE2B 8f82a57ed31081abb50ee798ad80f3de5b7db8dbc3a3428b150de486834fae52253d9765d27a19276cbd79daf9a522c52733caf7a1ed824064932dbae3ade282 SHA512 af5e2dd5822150faa278e4160e41696a322deec3ac97e3df0cc100a1b8cebc929c747235a051ac86afed0269812f10dfb005160a56b49703aa67376064c49ad1
+EBUILD infernal-1.0.2-r1.ebuild 887 BLAKE2B 361985bc54c2d90ca87885edca9d058969416c20c78a8156696f585ae0e0971f2e41c858d9338660fca17bf5a5fec125c131f46db8484eea95c1551b357c6239 SHA512 42aadf3def8a01d822a138d3baf319ec536dc48565863c0d63bdcda69e50fb3636d1059ca0db262576b05123d3b54c69418c68b203483213521e1ae4fdb44d82
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/infernal/infernal-1.0.2-r1.ebuild b/sci-biology/infernal/infernal-1.0.2-r1.ebuild
index 2e96418b6bb9..9aa5fd13f4db 100644
--- a/sci-biology/infernal/infernal-1.0.2-r1.ebuild
+++ b/sci-biology/infernal/infernal-1.0.2-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -11,7 +11,7 @@ SRC_URI="ftp://selab.janelia.org/pub/software/${PN}/${P}.tar.gz"
LICENSE="GPL-3"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE="mpi"
RDEPEND="mpi? ( virtual/mpi )"
diff --git a/sci-biology/mothur/Manifest b/sci-biology/mothur/Manifest
index 6e085b66342a..28a0c3b5a9b6 100644
--- a/sci-biology/mothur/Manifest
+++ b/sci-biology/mothur/Manifest
@@ -1,5 +1,5 @@
AUX mothur-1.27.0-makefile.patch 1196 BLAKE2B dbe053a5f5629eadae57bd09545ef46106741204050d0c888532388fe0b7f8f2fe4d5f311163e95812d0d828aae2228a2f72b7f0c861f5a3d42a41e17b6ba4f3 SHA512 8a78ddbc926d4e116deed440fda8431ccbca3299ac182fc84850259187dc130cc43fb6f23845d055d998293fa43f94cbe35930242c5f6aa049f8275ad3e42adf
AUX mothur-1.27.0-overflows.patch 4894 BLAKE2B a9de0276a9ccbb5e86d6cf208f86414ea8c0befdf80807e05b40bee0c6f685cb40a608005e69eb3f77b85990424a36cde14971044cb6a1136a50d85078eb9f1f SHA512 aa392b2060cecc38006a7ac50aaa8e4249a020029234ac2abdc33441b12a09faabb0335144ff4d888e55a1da1838a45347981f49f6658f3546a54a30b5e2133a
DIST mothur-1.27.0.zip 7095054 BLAKE2B 96a6410d36f64ff50591955aa22bfddf6217c7568022c8c7f70ab70c65d57af2217477de56b6f9ceaf11237cdc5380bd354cf6564002357546539585d0f58221 SHA512 81821ca95d4ce3f0d1e6aa920c4fe3fddd70f716157312ed0590c1c4ad728e6786bfe79f6badddcfb060ed5d1996cc1b5062c320a59209fef35f68e687ba3dd5
-EBUILD mothur-1.27.0-r1.ebuild 845 BLAKE2B 52cc28dcfd3df857f51b9c430c1ec5f658562e922f1394f0d79cba4fd6cd33161cb5639e0d7ca95c6b5daeffebe376baa5c2df0c5db6e8c6382fda40a215060d SHA512 6fa585f94e0caf8cbe40a2673d4e5eb49c6c8c9e5cbc279deef1b525d1674ce986068a08a994fecc079b5cee2301cd92fb395d884c4e23c98afe7587a49cabeb
+EBUILD mothur-1.27.0-r1.ebuild 846 BLAKE2B 7e8af4ea878dc3ba7a9361780a36cbb5a9fedd2b6c91a0cf1c7bb641a740e744aebfa9e7680d93627fb01ae2c01605c360eed12458bd1582f183d45a8e6fdc1d SHA512 4f7c99493fdecf9e27b5804252377a24ebb8e7d5f23e6a73e41082aad6dfbc5004e40cfe2c97145da23344d73ed0af09c5fc8a51027b31191ac78d869c354906
MISC metadata.xml 340 BLAKE2B cbec7e93cd78a2aa9652b6aa68d8f1c4838fff7c44db75c3bf4f08aaf24d0ff91d3a20a73143263d079a8658b526ad58714df48306fb7a3f5d79b9e65fb543f4 SHA512 325f529a1181d96fe70899f2e91ed7eb9e175d2421e50947e1fe3424abf4075dd8b96e07711e28a5a3de51885efc80c26de2ecc81e62b3a4a690e02f924e87c9
diff --git a/sci-biology/mothur/mothur-1.27.0-r1.ebuild b/sci-biology/mothur/mothur-1.27.0-r1.ebuild
index 12b628475aac..3f5603e9ecb5 100644
--- a/sci-biology/mothur/mothur-1.27.0-r1.ebuild
+++ b/sci-biology/mothur/mothur-1.27.0-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -12,7 +12,7 @@ S="${WORKDIR}/${PN^}.source"
LICENSE="GPL-3"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
IUSE="mpi +readline"
RDEPEND="
diff --git a/sci-biology/muscle/Manifest b/sci-biology/muscle/Manifest
index 8a5aea9c17ad..27cd7bd28fd3 100644
--- a/sci-biology/muscle/Manifest
+++ b/sci-biology/muscle/Manifest
@@ -1,4 +1,4 @@
AUX 3.8.31-make.patch 922 BLAKE2B 57f112a4538b1b0a791f9e151e0e27ba8c6af2beefb6ce95f064edd183315e17a09d92a9cd0a368907e2b4a1571463669e5ef83e96758603fa4807780ea98bc0 SHA512 c948991ab4f7b7d6e05ab63df00ea6ac576587e63f808c377cc86f4e3863c7cee207569d7f0a8572a8fcf81f2e23d9dd6b1270447a0028910301d74554ab1fac
DIST muscle3.8.31_src.tar.gz 515267 BLAKE2B 79a8517f7a14d8ee907104e9035e1284fcabec556544508fd9b712789759448969ce39ecbefcedac62c435dc91e109b3b5b7027120691310ffebda80ca80dd9e SHA512 2baf2aae354ae1e3f529e627be2ace86e89dd15567e1f642a625b63f08ebe3d4bd7315080c7d786d95e3eda8703545ec74af9fe83ad1523d55d00137fb7274ce
-EBUILD muscle-3.8.31.ebuild 583 BLAKE2B e8c673ec8ecdfcd6e8d490ecb5fb3ed8c15d7610764c35c7b83b5cbc8abffc51b59ced33f45be4d46cf3c858139358644c5944a95b9ce7f2767b9eb18614107c SHA512 66010e20d06b0c8053988ec6288d95f6df0f8e66e907e7d2592ef811290b0950f44dffec3015d60d8b73be6cc2fcaaad6795fd8e740ab9c18fc2edaa05055f85
+EBUILD muscle-3.8.31.ebuild 584 BLAKE2B ab2cbaa5046807ae92065e39b81179768f3b94eac6a28ffff1b9f670b8b74a9bff5ef6a4169c76189360bb7f7fe43a4804c95a837f739f66939e9a538cd4f9c0 SHA512 0f7f1a9f877cef9b54b19e884c315aaf03566011bfdbb3a0b061324382a581059bf756d1125db78dcbf8a83f92b57b425a555d2de6101cd8e2fe42cdfe8243fe
MISC metadata.xml 341 BLAKE2B 6b03204418f247ef22fd3237509b77f74c4e3a8f2df5874c387fb0c63a8e36fc3fff55ee252409cf541fbedc1cef37a4ba58dd73b647cc3ae2e6ce5d653b5e34 SHA512 e921eda7a3135f20b64253b388af339085f7f5c020f72a082dab4a6600fbe8841f236348974886f177a3196c83ed0fb25954128b272c3e92544f1880f49fa809
diff --git a/sci-biology/muscle/muscle-3.8.31.ebuild b/sci-biology/muscle/muscle-3.8.31.ebuild
index 1638c655be32..e47f5f66cf46 100644
--- a/sci-biology/muscle/muscle-3.8.31.ebuild
+++ b/sci-biology/muscle/muscle-3.8.31.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -13,7 +13,7 @@ SRC_URI="https://www.drive5.com/muscle/downloads${PV}/${MY_P}.tar.gz"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="amd64 ~ppc x86"
+KEYWORDS="amd64 ~ppc ~x86"
RDEPEND="!sci-libs/libmuscle"
diff --git a/sci-biology/pals/Manifest b/sci-biology/pals/Manifest
index fc94ed371cb5..cc4313bfca40 100644
--- a/sci-biology/pals/Manifest
+++ b/sci-biology/pals/Manifest
@@ -1,4 +1,4 @@
AUX pals-1.0-fix-build-system.patch 681 BLAKE2B 8460ce718ce1a1a57970ecab525aa798e033c496a0108f44457155312653ce180ee700c76b1cf3a7b9f099a924cd7a8c0f027ba1cd65d96b688a67b97fe247a7 SHA512 bd95517d72cf567a4608878d556919396c9dd1cd77a4e49f2f8604f058c76a1f26c31760ad6ef6048ec12b76de46a6f4c56b5cb27b4aa1f91339c8f14bd963ac
DIST pals-1.0.tar.gz 24895 BLAKE2B 09a24b3a2e99471378f33a84c447dea9153ddedd502de4e6b771c85ef99df5ca30f687b58d1d9d4726b29345215b617f1dc93a71b8be417d8c0c03e8ecd71015 SHA512 655e3311c63709dab1f8a13b193ed30a5ee97c04757a1e8408a74f6110ff3bdd96ba9eb07f4987ed5b83790ffa8cec67f722fee783c4ab4120483a683ebb9b8f
-EBUILD pals-1.0-r2.ebuild 497 BLAKE2B b36e2b2b6a59da25b6502c60e94effca3c077d3a4d5fb2c080242249060018902c6618be0858b87a3bc3ad636547b0d8d947aaab82c2ae04367dfe7157a16449 SHA512 4337ca026fb8ba1f103c49216235be329f55b5eca9fe8ab31d91939a239d5b03a442408745123947377956241f5ce9ff66f979308855677b2094f5f60a79a178
+EBUILD pals-1.0-r2.ebuild 498 BLAKE2B b97b685338ebb8a529c9584ae8ab38cd6e846eac0e675f0e72e6f268a04eba076d492117da9f8eab739d8b928fe3e00f0276a305aebbf6c55682b074ef56df89 SHA512 af9a842ec977c95b593357317d27c7d3687cdf00d30a8e72dcf5468d395e187ad9aaa4027360536a6f4726b0ee80ea31ff13c45c900e6de497476768a34cfd0a
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/pals/pals-1.0-r2.ebuild b/sci-biology/pals/pals-1.0-r2.ebuild
index 4e367283bf01..94f972567ea7 100644
--- a/sci-biology/pals/pals-1.0-r2.ebuild
+++ b/sci-biology/pals/pals-1.0-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -12,7 +12,7 @@ S="${WORKDIR}"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
PATCHES=( "${FILESDIR}"/${PN}-1.0-fix-build-system.patch )
diff --git a/sci-biology/phyml/Manifest b/sci-biology/phyml/Manifest
index e5a4c6a54843..dab86d361d0a 100644
--- a/sci-biology/phyml/Manifest
+++ b/sci-biology/phyml/Manifest
@@ -1,4 +1,4 @@
AUX phyml-2.4.5-fix-build-system.patch 1735 BLAKE2B 2ba677db3b00cc1ede4701652cd854aa8f92bc545668fae50add726fc5ddcc0694dbac7189216816026433d5c25864c819c77a887a03f6a75f111084611b6689 SHA512 95079d00d4a7373f9b6f9b17b707ae999db38a341e03f96b5f1b023ea4fd76a4027f6a46c6e33ecf7902ab4dcbc22d199b5c0f75a7b0059c90f7c11fbc9146cf
DIST phyml_v2.4.5.tar.gz 92143 BLAKE2B f95b6b5023cd9b68e92e600edd9ee404bdec717d0b1e748c9e4f4667d732a23469762b847e4aa3c36e5cea7ce1d663ade031ec996cd6449ef1cf2fd55b96b2c8 SHA512 119716290eca0de4da05b0bacbec96139f4c89f6a033b861d1cb2655a620766bd0bea0675c4d7722a31d888652a28bf3544a643f39f11682982ede80dc5928c3
-EBUILD phyml-2.4.5-r4.ebuild 524 BLAKE2B bc347c764d77c74c0af028a7334897ca43c73607f77d713e2aad98c0d15655b39cfb5d17f50e3cfbf9f026e5168ac810affe15e71713d2a2c81b7fe99eba3eaa SHA512 d12bc078bf9f3592b2c44f09b3f5c9456d8d1574df0d98ba998cab21af68dae60dc910d90dcc736c1fe83f0e082ba4e88363d8fde3e79cd7eaf287c3c077f641
+EBUILD phyml-2.4.5-r4.ebuild 525 BLAKE2B adba2b7291564767d50378cc45e11a63064854a69dec496c33bc2476587dd56b4965fabdcdaeeb46c983fd70716986d3249266bf665d56c8ee0bbd8c0749c283 SHA512 0e3c4fdb8601b9780f269dc65ae53a13f21b0118dd11ac340d379679abfadff9818e807bae70241c1d8636ab70aaa073523c1108e548b50bccd289dc57cbfa95
MISC metadata.xml 564 BLAKE2B 449bbc55fcabbe9a9fea66017ff48bdf5075345496d6cc9abc6a53966245c00894093b0852eaf1a74f6746db4093d8a3be36a4f9e00b6a245d38716b146247a2 SHA512 89b24d285a76e7826563f631b991ea871c7f4e5c2048ab47cb8d1d028abcf817b5e582bf93d3ea122b019e4b4a49f386f3d95f6103bf39c0979b5f6a3c19b791
diff --git a/sci-biology/phyml/phyml-2.4.5-r4.ebuild b/sci-biology/phyml/phyml-2.4.5-r4.ebuild
index d256370553ab..c0e9c38caf92 100644
--- a/sci-biology/phyml/phyml-2.4.5-r4.ebuild
+++ b/sci-biology/phyml/phyml-2.4.5-r4.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -14,7 +14,7 @@ S="${WORKDIR}/${MY_P}"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="amd64 ~ppc x86"
+KEYWORDS="amd64 ~ppc ~x86"
PATCHES=( "${FILESDIR}"/${PN}-2.4.5-fix-build-system.patch )
diff --git a/sci-biology/piler/Manifest b/sci-biology/piler/Manifest
index 6fc587829cfc..e93bd6f53216 100644
--- a/sci-biology/piler/Manifest
+++ b/sci-biology/piler/Manifest
@@ -1,5 +1,5 @@
AUX piler-1.0-fix-build-system.patch 685 BLAKE2B 8df7772012b8809599d0c80d52ec60884ee086f69b6b9f185cfd8b9026d4e047bd7cdd8e4eebea0e5fe991434ebc146cba92721fa9ab0238803c69e2d2ed06da SHA512 e8a618615ce62aa6b4d7e5d0a4ec3facd13b6baf2573323a2f9c03d81171f1c32686bd7b82c4576e0b38cc3b30b201750034ab160cdb9170215ff480eb72a3a2
AUX piler-1.0-glibc-2.10.patch 386 BLAKE2B 758ba0e13cf114998a78866ae4ba3b11cc27aad09f17db84ed7b295c14ccbc15e8446b49bfc425f0ed92c694e16dfbee33ffe9cc0618bbb92c142d4d0c1628eb SHA512 0773c9b6c2eb289c8dee3cc8db6ec0250cd8df3b9e5e729305b58b28db64f486571f2f54041c84d178bf984cedfb4d9941c5abd47f772ecdf29e9ec0bdb55fcc
DIST piler-1.0.tar.gz 35220 BLAKE2B a3a5d9ab6885e0900c523db9d1248888cd3de50b18c2c4ae110a13d792a0faa60eefffbac4526df96b482b4fe6ed8bd19299eb96380332a57f2d60330ca40037 SHA512 35be1b445f1eaf26f96d0356a04d985fb528754677403df2061c0872107d31819c5fb355e7f616e953a997e67ce781846acaf3cc2a016097aca785b6a26de3d4
-EBUILD piler-1.0-r2.ebuild 640 BLAKE2B 30477b8cee6c18196e5f71db6a5ee4c786b1e84fdb8bc01768f03b3eacb765c3fb500bd8b1901f56a1046fda6f78c220d3b0658c02f82beeeff954e7fca72576 SHA512 88e1e8d19be93fa2325670e8c42c16b3bc19c193af20116e9bd60b8a00968c90088531e345ea1d9f6b9b54b72f021f10cd44387bf10dbdf17b4bba8ae7391fdd
+EBUILD piler-1.0-r2.ebuild 641 BLAKE2B a18f9440a48997755161346e4e04573779b0b150db54f84b5dddd5b2c7f48fe27de2302f7c7f632e8a5b746555e1748a81b944fd6630629a341b640af373698a SHA512 4949eeac5e8220cd31dfc3ad64c6949e2463ca94c5c1534c011626d0121a1d9717ae7c8e090abe23f2d5183983ab6e29036b412ec36c2cd8c30d42ffb6912657
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/piler/piler-1.0-r2.ebuild b/sci-biology/piler/piler-1.0-r2.ebuild
index 845be78e1fe0..6f419d040b89 100644
--- a/sci-biology/piler/piler-1.0-r2.ebuild
+++ b/sci-biology/piler/piler-1.0-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -12,7 +12,7 @@ S="${WORKDIR}"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
RDEPEND="
|| (
diff --git a/sci-biology/pilercr/Manifest b/sci-biology/pilercr/Manifest
index bda424303fd2..035072135299 100644
--- a/sci-biology/pilercr/Manifest
+++ b/sci-biology/pilercr/Manifest
@@ -1,5 +1,5 @@
AUX pilercr-1.0-fix-build-system.patch 673 BLAKE2B 53bbafb9d1433e78edb3568db8e1a810ba1cd1b08f3f1b53719b1b98483825a50ef5daf06226a4ad72e577e50d3e034f6c2bad6b53fa098c89cb7635166c8223 SHA512 b744c3fdc6e1ec152a27592ce8036de080c113b6385c5743dfca325ae8e0435d34418ca9f51830c540cf8efae710d842b89dd1b2b7b772379a4f527a72ff2c06
AUX pilercr-1.0-gcc43.patch 854 BLAKE2B 2e3ffba380df1522f28eab7e48103d6c56d1548db3eb8622e9e5f77c098d420858b1f9ba656593f949454b43f2cee5d7a79cd9d2fe712749cc481f4f1dad61d9 SHA512 7e83a1c29f2b6b11e101ffebf99516c9da06f7fa7645aa619a89c365dc89d6ea2659d4610eea25b6e260328b56320e6d720f3d0d67a01aae450104fc9513d58e
DIST pilercr-1.0.tar.gz 1709144 BLAKE2B 59aef12a10d168c8cbf4d3b3eec95dd4cd47b0ba073f19bd9f3954e6fab088af1c9f0328b0120c219034be07e4d13af4df17ca3eb7f40c19ff2a13d72000251a SHA512 c262ceef1d1af9e71f454809e940c2ad6d835a8404daa51ccef698b8348a504c697f5b5c268ec24df611f5adda2932e4982bcdabe4fbdf99d8c204f0f77f1be5
-EBUILD pilercr-1.0-r2.ebuild 586 BLAKE2B 56782b41777a8e3bedb47e2dccf4c4f5d1e92bd0287b1100011b3e5b6aa56b02dbb8e5ca463aea9041256c4a808f8963fe7a68427ad079f6841b4183c424b194 SHA512 c999f02d8e05561918a19428ef66894117dbdb99bbae6c722bb90211fafec4401667b756f139926b78bcd30d05492e0f05ffd4f77fc3c5c337340e255ca09e7f
+EBUILD pilercr-1.0-r2.ebuild 587 BLAKE2B 57061036e02f6a5bca8d5c485d353dbaeeb791507ab663fca8a8fb751cd16107d7f5a4c317bcdce346fd844ac135d242a1fd8c0843dfe1e9915b759324b2e89e SHA512 5445b17fd632b7d719debb43e610561523070fe6dc87f180df65ada5c0a3a5613103a75ef5344956e0275a30ce1ad034d509c3061e2457930b61b25fc6a83241
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/pilercr/pilercr-1.0-r2.ebuild b/sci-biology/pilercr/pilercr-1.0-r2.ebuild
index 819fb3fbb03e..46c5dbc2b944 100644
--- a/sci-biology/pilercr/pilercr-1.0-r2.ebuild
+++ b/sci-biology/pilercr/pilercr-1.0-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -12,7 +12,7 @@ S="${WORKDIR}"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
PATCHES=(
"${FILESDIR}"/${PN}-1.0-fix-build-system.patch
diff --git a/sci-biology/probcons/Manifest b/sci-biology/probcons/Manifest
index add7a8d4faaf..0b7f900ba250 100644
--- a/sci-biology/probcons/Manifest
+++ b/sci-biology/probcons/Manifest
@@ -2,5 +2,5 @@ AUX gcc-4.3.patch 1300 BLAKE2B fd74d2cb3311ef89cb012276a55025e4430b452cd603d2386
AUX probcons-1.12-cxxflags.patch 1957 BLAKE2B 5308ee19d8bec42bc23ba8bf6ee38b4d559be0bbffdae032138f32a5890e6524d3025124f48188f4b580035b398e4957ba246a9305d05577b58909259a73f396 SHA512 033e92e414d3e2d1db867aec980d82759a662cf46692e3cc908bb7b3428d5eca105fb81cbdd8764c54dd3d759d29e713ef085fc48aac183426d26fe68a48a38e
AUX probcons-1.12-gcc-4.6.patch 306 BLAKE2B 0b0dcba7749192be0361fcf2a0778e8a4ef168a1d867e9d1ccaa097fb75c8b580a255dacf25d1312e648bb623e5796370d695afd742304a06e2d18547ceac4c4 SHA512 f8a393cce2a860ea54aa18add7ba236aa43e21893925e4484b272190e29aa2dc27bf20b11edc5694446f027c6d8d6ff3c3f92383f0b0c8958b1b1d5b7564f828
DIST probcons_v1_12.tar.gz 43200 BLAKE2B db59a4472e5ea4ce1801ca74807aa1b1bdb2861a9e52f9b3a4297b37d048ecd6e34298cfd181523093f8fb1cd9a81285e58098bcdec6ffa32caa9cc1117b8b8f SHA512 ce061ea5cca4204d6e66beb893c1ba508f094b7ea3ee08196dc75a5443ebd0afca14dc8d7cd6c8da4ce1578b8750ea1981e5815408c0b122e8f97ec27b3bf008
-EBUILD probcons-1.12-r1.ebuild 1132 BLAKE2B 1ed9f556e3d393ba41611b505cf6a8d682d747d7f0b93001793989d56c710564c77326cc704a50f80e3c9ca338f529f02bdd56536ef6f2083d51439de792640c SHA512 2a506f516adc4190e74d3d756a5a11779f1d06473e4daf132a34829cc9f07cdafa50bb1d3b908df984037ecef885698734c7c964fcd013b3af29e20e71158618
+EBUILD probcons-1.12-r1.ebuild 1133 BLAKE2B ab40f07f30f087fab76b88c26a1847850261bb11eb294cf8c9f79264a82f7e55920d7bba7be8c368dfadce0449cd27b29740ced38154c2fbf0fa58bc19d6d15e SHA512 914fe25b441c1bd798d5d1f8ef7b4987ffae6117f19c6ed8b01802ecceee4eb49efe20b0c2c90c6a85e2dea93867e75a234b8fa4e0854e3f6284f7d1b1b3f170
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/probcons/probcons-1.12-r1.ebuild b/sci-biology/probcons/probcons-1.12-r1.ebuild
index 15960982abff..3f0f2670b7b0 100644
--- a/sci-biology/probcons/probcons-1.12-r1.ebuild
+++ b/sci-biology/probcons/probcons-1.12-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -14,7 +14,7 @@ S="${WORKDIR}/${PN}"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux"
# Gnuplot is explicitly runtime-only, it's run using system()
RDEPEND="
diff --git a/sci-biology/sibsim4/Manifest b/sci-biology/sibsim4/Manifest
index b005a854599c..f4f8bc0957bc 100644
--- a/sci-biology/sibsim4/Manifest
+++ b/sci-biology/sibsim4/Manifest
@@ -1,4 +1,4 @@
AUX sibsim4-0.20-makefile.patch 603 BLAKE2B 1d5bf536aec1c8d6716a2feeefc19d9397c8a8446899d40bdc58abe577ed5b4e7234b21bd428a831fcccd9ed0cdf6da70e9fda0db3070e3d51506b91b4324d01 SHA512 d434cf369ec418e29df7d34b139acf06182d84d1e83a7aaafe2d5df2ee49884ff86ad7fd5b6697108e7d1dea865652c8755459ff4ec0ae6395b1ec8c46126e55
DIST SIBsim4-0.20.tar.gz 32118 BLAKE2B 79b1f080d547732ee6a5996885c26f422f8a1590fa37d525f35cfa3dee353fd36ce9aa4677fe7e570f43e8283c26541c8c9e76ca03788a66d1c356adb3d649d5 SHA512 3802520095e83d3c691804b661696095a4198c4b2a16385c55ccdc8e4e836f82cc9c2251a5d37cb5918c2ee80aeb81737d751e6b065fbfe9c64f1aee3e0ea0c8
-EBUILD sibsim4-0.20.ebuild 518 BLAKE2B 0999e252ed6713e462f04dfa6d1ee0c48982ff614b54aa4126fae1ab4bcb615153abcef38806a193e32bce14daf9d7b22ff71a86d005b7c222b497dd7aff23be SHA512 903d8d9a98e31197a9018cb13d255a7ce7ca2cfc94d40f4fe8ee793ef2f8e7736907a6f37633b900b02430a842fae11e55ad1880e551807dc40e8069c2aff59f
+EBUILD sibsim4-0.20.ebuild 519 BLAKE2B 5722f5be83f06fc155500fcf5baa4780874d9e84be2ed9e607fb1d5850c10af504ac62d807c5b3e4e905494d246dde0073262c3788f5c9e0873bb0368eef72f5 SHA512 ea2b8e53d2f12becd13e5fddcffa46e20ee05d1b88fc5cb1c756abc1ef7ead63d129abfb130761ae18b66b754a39fbfb66d6ebd6b3843bcc5a852c1290e1fcbf
MISC metadata.xml 349 BLAKE2B 67cc5ec26168241638acef4254a0b8682d9df46e574871b9aaa114a5ba8ecf3bf2e3a6bf5523c145df33415e1900faa95e8d65344b861c18e6e9ee800b2fca5f SHA512 ceea81611ac099beabf355230b2df7e61e96fdb8823e992bc283094f182ca8b2486f50d016242f1dd21c1b4148b832f73de4af9cba57a108122d714313a8b5f6
diff --git a/sci-biology/sibsim4/sibsim4-0.20.ebuild b/sci-biology/sibsim4/sibsim4-0.20.ebuild
index 679cb462e045..c90c13dce7ec 100644
--- a/sci-biology/sibsim4/sibsim4-0.20.ebuild
+++ b/sci-biology/sibsim4/sibsim4-0.20.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -12,7 +12,7 @@ S="${WORKDIR}/SIBsim4-${PV}"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
PATCHES=( "${FILESDIR}"/${P}-makefile.patch )
diff --git a/sci-biology/stride/Manifest b/sci-biology/stride/Manifest
index 9f85d690142b..9d769b29916d 100644
--- a/sci-biology/stride/Manifest
+++ b/sci-biology/stride/Manifest
@@ -2,5 +2,5 @@ AUX stride-20011129-clang16.patch 348 BLAKE2B 22c33a3dbc2c0a85d3ae8aaf1072e47486
AUX stride-20011129-fix-buildsystem.patch 807 BLAKE2B df077f9234808abe3a9346af6c4a8bde92812cc9f782ad37b75b060166b35686cbcdc2f4b12c26263127dbd3c488660bb2cf70bc553c267cb3e9f70eba68082d SHA512 2afba4707d8371da1fc79c5bfa6f476ac76682d67e52287462eabfcecd394f89a9fe68810045098c48107ed7f33b8c44c566f609c647f71a7918375cfc9dc220
DIST stride-20011129.tar.gz 56441 BLAKE2B 4d4cd3f9f6cef997fff10571aecb70cb21056e88c5130e7dfdafe15a6fb353656d0635b4d65895ef115479a87dcf600b659455d15460344c838543a2e356bfae SHA512 cbd40fce4684728f363520540132fc1a0003126954a145d59aeff48adb20fdaa66520bd12b56ee5d2906e8ea97bf78a225204105b820f7f368aee5e790a6471b
DIST stride-20060723-update.patch.bz2 5621 BLAKE2B 266a7371c0963a996430c1f809b46196e8bf179fcf2afb4380f6eccd092c03b29d5b09b8a8438ee7848d0f411920db2e4465ef646c75a406197412f35e880179 SHA512 e06eb68b907615e12dc1a9981be157400e9ffed9391a906cb4eb3ef4067b7027c26cc600298053bfc5d2bbbebbbfefe0e6b18d0e4f6fef2172768e6f95498af1
-EBUILD stride-20011129-r1.ebuild 853 BLAKE2B be20a774370f1e3660958f4e94f40babeccbc2c4f99d20281828c3dc0c84da32e1b52ad7e8549f8ae3aa3fe23e7bfd66c97aba6884a333f6928b13f3b0f2dc3d SHA512 d8caeaa090636a6d38ceead5b7417f41cd9c44af262af550f67a85a5342e8ea87e95798917fae066e8c2700f9f87b7a94e3e6ed427c1a80eb2844f0ee266c57a
+EBUILD stride-20011129-r1.ebuild 854 BLAKE2B ff439fc25f22523b039c792b8d0af454740467db742945774bad7617aca732c0fd5e3cd88d359aefad58387e36b9f24597ff017d4782beb7fb0ea77b54e9976f SHA512 19460010484839b4051391460a819b64e7703c66f14764b54f16b48cd736dbda25f6142b88d2c18d3717ba523f1930756c616d74570a274c61669bea118418ac
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/stride/stride-20011129-r1.ebuild b/sci-biology/stride/stride-20011129-r1.ebuild
index 9638fd559b55..13bfc8e29073 100644
--- a/sci-biology/stride/stride-20011129-r1.ebuild
+++ b/sci-biology/stride/stride-20011129-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -13,7 +13,7 @@ SRC_URI="
LICENSE="STRIDE"
SLOT="0"
-KEYWORDS="amd64 ~ppc x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
RESTRICT="mirror bindist"
S="${WORKDIR}"
diff --git a/sci-biology/tree-puzzle/Manifest b/sci-biology/tree-puzzle/Manifest
index 47a8f5a4de1c..f89e3f5dc55b 100644
--- a/sci-biology/tree-puzzle/Manifest
+++ b/sci-biology/tree-puzzle/Manifest
@@ -1,5 +1,5 @@
AUX tree-puzzle-5.2-C99-decls.patch 8138 BLAKE2B 94b8cc95f46d05b762e508ed7181a0c06fd05b98a06d1075d5e579cef6687bf7d617fe3ec69bf0cc57492079d628c7a636582efe00651deb44f7f9a976ea166b SHA512 30217da1f30615406d45795cda2d4a7210e2b845b54d1d05fd11bc403e02194767e11ec14eec9c0e44d9ebe0e5cbcefd1d12e71b1dcbd5a9588866b8ff2b51d9
AUX tree-puzzle-5.2-MPI-3.0.patch 15029 BLAKE2B 368eb7e3d209515a94f1049da80ebf9f14824e44e8c0b1996ba9c5ac7bfd58c167c01582bbc0d058a57d9797d844ad32e8bf45ce921a13c6e217d7728564a4d7 SHA512 576ed6c4a96225d55a1def0c4912cf908d0225d9ad9f9e0974a98f24d8bce172406a11202b9656c23661f6bb27b51a0b4e3bf95634b3c11aa10c20cd9d68e648
DIST tree-puzzle-5.2.tar.gz 875142 BLAKE2B aa13e9a7aa403c12aebefb94a1931baa8b17cbee56d20011cb06db5a7b1b7f78c719ed6c6bfb0b79e47dc652d7b984415694907fc6cd56bdbe9eebca4aaa96a8 SHA512 5b9a729b120cba59f59ba426acd439cf396826ea01e75361b23387ccb9baf295d2512f21af96071a5f7b7507db4ff4d6b135cf6c5b6233a8b438532d31abe751
-EBUILD tree-puzzle-5.2.ebuild 1157 BLAKE2B e2c54db875cc4f107b57ef94956ebf2c572c9594851125cb60a886dc98856c8c8527b20b014e68aeec6b57ac7171794af3d6c049f133839e23bfcb3255112cd8 SHA512 a572c010039f119fb204430179ab153c14802d3fe0911f14b21f18eaed45bf1f3ccf51c5b20192cb84a68dd219477185d5970b1268cdf58cedb07ab90ad1bf93
+EBUILD tree-puzzle-5.2.ebuild 1158 BLAKE2B 02ddee11b88843dee47e78d6d81ea50bf921fc206074a13249f3cff2da249d169fb8bb2ff8ae15c8482226031bf5ed8a23be5b9f4659617c600ed1688ab645fb SHA512 2775a89c697be45cb2f3e9cb7f362505ebbaa2ae11e74836e63010153803d09e277c47e25550236eb6a25f65ac1451f4e5dd922114dc9baa01c28434522bdd69
MISC metadata.xml 1556 BLAKE2B 1f8b1d4719d156e9a9783adce70d8f4c0c17a7c855e5590bc796e16062066883a27f780946edaffdc04eb6f640ac7e81d71b075ebc5ed9759c2a5d4da20ac46e SHA512 07bd436f7616301172b07fefd72390a46778098baa3e9db949169850a60cd40e27a0e58dcafe5689923bc1e7cebb4e317a291f5caf2750651b76c447f5799215
diff --git a/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild b/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
index b5e8e3931220..61e95bb658d5 100644
--- a/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
+++ b/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -11,7 +11,7 @@ SRC_URI="http://www.tree-puzzle.de/${P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="~amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="mpi"
RESTRICT="test"
diff --git a/sci-biology/treeviewx/Manifest b/sci-biology/treeviewx/Manifest
index cbc714766ee5..f2ba92caa304 100644
--- a/sci-biology/treeviewx/Manifest
+++ b/sci-biology/treeviewx/Manifest
@@ -8,5 +8,5 @@ AUX treeviewx-0.5.1-wx30.patch 1722 BLAKE2B bc7d24b8b3953316ea4f8cb9eb26ab78fb7a
AUX treeviewx-0.5.1-wxstring-maxlen.patch 1438 BLAKE2B a2dc6fe39c0312559628b61d86975a21db846e4c7cc3a0bb5739dd971417abd3ab9187ea56ef44d37c0394b28d4017981073eb4d890622d0d929f7a4d428950f SHA512 6e02ac59e8a28da8e94d5d6fdea71b3db9bc4501d9becf2d7aa6472d3f9f9b571fe68730390fd4cf6e1e422d618c21c40d86442d6b710e8395db107fc3445392
AUX treeviewx-wxt.patch 1716 BLAKE2B f869d1d90dd23a7f0e242d9c1d0b0b97e0e053b5b2f00b283073f6e7f2d714cd2bf23656e65af1f3496bef0bf681ebb0618024f259b7f4d6dea777b048a438e4 SHA512 97d074e9501000099d0c5b3e3f56a796b1526499d4ccb44ef6f0b851bde1c27fc78bbc64f439ba5ecd3afa531b752c69148d7cd3b1e5a08a01566ad6155ce25c
DIST tv-0.5.1.tar.gz 426745 BLAKE2B 080c4e09f441fd83da3406990bbe97f9e29fa531f47a65533ca887580f8a3ec561bb4766e66e2ef4764f68eee86fdabf48481cece56ddda90f9ffdc3c80b3a1a SHA512 45a7ac6dff5b22771e4428d6b1ee528c0039956a462658d28d4f588b6df32620d8f69b3bcf5ca23643e2bdd5361da00625fcb1495bcf4f74d44ee22022c63143
-EBUILD treeviewx-0.5.1-r3.ebuild 956 BLAKE2B cd915d4350fb7e88aab942abe68916c8d1e284a8d75f28b0d356c59e1b39737ff6b5e7ed0767ae5876ecd70ff504ee2051e985be09bbdfdcf7b06bc1a6c33160 SHA512 78a6be94e42efcdc3dff4e54b3b775976f53a40482e4d0a62b9b024d981fc228228ad7bbfb49ca28d1307904fd13c6ff0742872fca9b6c976ffdfd60cd1f7283
+EBUILD treeviewx-0.5.1-r3.ebuild 957 BLAKE2B 6ce825eb0c8fe77bcf255d9a8f17f368f099263dd7c394703045f649246d3e44e2a18ef35c2f30bde461a1d05f0e6c197141a6ec3ff8a54d68084f0eb8868037 SHA512 d2e3f159cfa0e3c32bdfbbf464ca426c6f8db4aac39a53447b1d49015cb29d732429f3deeaadfd7de059cb3a779dca21818d54890aa136258997b672c3810033
MISC metadata.xml 531 BLAKE2B f64e8c2245f0f7e72ffae3ba9f3b7c4aa0a33b769fe3ccea91c3584c8812fefaa96ad6a7745ca2afe18b1f8692e4dbf67c71009a43a2bb00be3643f2822f2b02 SHA512 66338bf8a4993325ed69bac97d1ffba8421aeaf6ceaafd6351f583fb8ab4528c0a0d70ea28b967babce004f5f3510a04a18e2d8bf549526939a7c8295d395b97
diff --git a/sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild b/sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild
index 359aa98a784f..ada60056715e 100644
--- a/sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild
+++ b/sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -13,7 +13,7 @@ S="${WORKDIR}/tv-${PV}"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
RDEPEND="x11-libs/wxGTK:${WX_GTK_VER}[X]"
DEPEND="${RDEPEND}"
diff --git a/sci-biology/trf/Manifest b/sci-biology/trf/Manifest
index 3fe00c412cf2..0a84708cdd24 100644
--- a/sci-biology/trf/Manifest
+++ b/sci-biology/trf/Manifest
@@ -1,3 +1,3 @@
DIST trf404.linux 89853 BLAKE2B 36abf95c88a5b8793e875a276f1494af4df48ff3b3f095e07683589d84eaadfb54099c1764dcd437158c356dcd9d55dd274e7e41515ef098ee2a929493cc0d83 SHA512 c1aa05e394d47ea153df3082258f9a089aa59976963e9ac5d5816ef9dcd95c47e2e46861d1b2aae52b5ea9950a823a2449dd0d8426b04f2b738f5552c319393e
-EBUILD trf-4.04-r2.ebuild 615 BLAKE2B b12ca83b210055d3406af3d4b24e520b8a5ec347dc41df8cb89f976329799a38b218d1a6144011d6b59917460ba02577323b4c243e84508545455befaa60231f SHA512 21b4b7c00c4b56b2887ffdc00f91035e26343b7e4d6d9a46b31163124e5e539d309fdcc46d2f81dc37c15ea486e791d948b0e1df39bce547e161b526be3405bc
+EBUILD trf-4.04-r2.ebuild 616 BLAKE2B 3ee07517167ecf9be378d50c907b0a1633b24f14c02050f90b641a23d0902cfe8a922c7ddcc8f83d2455fc734a84b62d7ca76f9fdadc26e89575df2aa119a56c SHA512 dc8daf13e54aca77b1426d913bbd9fed0b8a676bb3821cbd61a308d98d11f15d45334bd83f2b3e19c018ffc8a34e4d597da826fc2b87adcdb586d7bb0aae2d6d
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/trf/trf-4.04-r2.ebuild b/sci-biology/trf/trf-4.04-r2.ebuild
index 16cbb1c3cab9..79558a9d9f11 100644
--- a/sci-biology/trf/trf-4.04-r2.ebuild
+++ b/sci-biology/trf/trf-4.04-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -12,7 +12,7 @@ S="${WORKDIR}"
LICENSE="trf" # http://tandem.bu.edu/trf/trf.license.html
SLOT="0"
-KEYWORDS="amd64 x86"
+KEYWORDS="amd64 ~x86"
RESTRICT="mirror bindist"
QA_PREBUILT="opt/trf/.*"
diff --git a/sci-biology/uchime/Manifest b/sci-biology/uchime/Manifest
index be60a33141c6..c109defbe49c 100644
--- a/sci-biology/uchime/Manifest
+++ b/sci-biology/uchime/Manifest
@@ -1,4 +1,4 @@
AUX CMakeLists.patch 834 BLAKE2B 1d522463bda3a0dca822c59ade24a7443f7e1b5901a091e0a4a5c86221e4fce91ed968229ba752e5980e202b633ea762b5dfeb758b4c83add0ac15706b7bdcb1 SHA512 f4939dc4b211742c8e1b592b13ad2c24cd7efa050b64c8eedaa99d61a8f60f54645c0f97185a33d13976201ac55249bfdf7edabb14f08e8487412d1b63c20841
DIST uchime4.2.40_src.tar.gz 66772 BLAKE2B 9133853d616ab6e1e6a397da78fc846ba00fc70c2c375eb16a98fbdec25ba6034bd1c876b7ec4a99305e76e47cf7984c1aa30b64bdc96e125f661a0150bae060 SHA512 c3afecb23d164d9c3db6229f54faa13120ac4d88132d9aef707f8d043091099db4205ac80f60242920af6efc23813b3e7e4966d562bdb75ff53244fd525e656b
-EBUILD uchime-4.2.40-r1.ebuild 464 BLAKE2B 24ad55ba2ddb2d67a1411936538938de2d3b0e67af516c372631cd38533abc666a712dc7c42f5056d199f1b5c4dface6f40e010ebb1f6b2e0514630423109ccb SHA512 eb8c6cafee8784f8a29cc4b51e6b2806d8c80332e9ee9ed9bb2db0c01bdb1ee472d606d00d02246a2f277862721e60b30a4d3b83cfb364fe7a3e316281d2f514
+EBUILD uchime-4.2.40-r1.ebuild 465 BLAKE2B 757bc3692bbd4d7f35f101ec9c3eac77f12f70299a3fc1e9ba8534bf9f9d9e521b00f7b05e70c5d747e8d157de860c1e8421c955743e058d7be4c3d0168efdeb SHA512 eb846f680069c32eb31fb8fe28adcb7a0011a75b2ee328f122625e9011ededa95bfe8cfcc5cebc6b81b3167a351618e3b8366c773b999df97a004f74fb442d41
MISC metadata.xml 899 BLAKE2B 16ffbc562faa208febfae33bc97431d40572425fcfce460803028a5738dd82981ad805c17234f745f36a1fcdd395cf7b901dfdcea84f8873305ae05b9fb95680 SHA512 8c4a79bb73bad622a8fec3b7c044d4c43dd442cb36b21dbbddf521adb09409b7d3341d4949df5c1fe581bd2cea3a5d49d62aac840f114974e573dd0d44e93790
diff --git a/sci-biology/uchime/uchime-4.2.40-r1.ebuild b/sci-biology/uchime/uchime-4.2.40-r1.ebuild
index fe35819b5eed..9742ee2575fc 100644
--- a/sci-biology/uchime/uchime-4.2.40-r1.ebuild
+++ b/sci-biology/uchime/uchime-4.2.40-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -14,6 +14,6 @@ S="${WORKDIR}/${MY_P}"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux"
PATCHES=( "${FILESDIR}"/CMakeLists.patch )