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authorV3n3RiX <venerix@redcorelinux.org>2019-11-18 10:15:03 +0000
committerV3n3RiX <venerix@redcorelinux.org>2019-11-18 10:15:03 +0000
commitb284a3168fa91a038925d2ecf5e4791011ea5e7d (patch)
tree16fe44748708acacd909d4e2e160a09a7f6d936a /sci-biology
parent77398e424e45d9e98c1cef3c43bdadb9d56e81ef (diff)
gentoo resync : 18.11.2019
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/Manifest.gzbin23979 -> 23982 bytes
-rw-r--r--sci-biology/bamtools/Manifest4
-rw-r--r--sci-biology/bamtools/bamtools-2.5.1.ebuild33
-rw-r--r--sci-biology/bamtools/bamtools-9999.ebuild33
4 files changed, 8 insertions, 62 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz
index dd492f9025fa..673f0b84cafd 100644
--- a/sci-biology/Manifest.gz
+++ b/sci-biology/Manifest.gz
Binary files differ
diff --git a/sci-biology/bamtools/Manifest b/sci-biology/bamtools/Manifest
index 54d81206f725..3ae03b0b2c07 100644
--- a/sci-biology/bamtools/Manifest
+++ b/sci-biology/bamtools/Manifest
@@ -1,4 +1,4 @@
DIST bamtools-2.5.1.tar.gz 549750 BLAKE2B c00b42b10e074e2c6b06f8bc9277a57080b9e99cd10080b1ad9052d59a3db353b33ecf6c30642d1651897396ea65e1e19cb15db0d58a89d4375fe34a8ec38e55 SHA512 f2c761c5bf923cf2f3db3dc54e40b4781307106b9177784f930aab619bd11fae3b343f3cfd232524580d39f0526a2a2f18efcf820fe4d9c951406bdb6b953afb
-EBUILD bamtools-2.5.1.ebuild 1273 BLAKE2B 9ff546267edeb8dfb4ebd0abd9664768dbeec6d5b03465dba3d17b5906da4895de354800a078ae76e53940a2f36754e560fd3f734956af4ad670f33400b36630 SHA512 66086024be16d409775722903ab5729a21f24914c0e8e52cde30604f15cd65a6292f35b7193f57b449dcf53b2494ea37a47edf8b1b14aca345a5df6f8fde53cf
-EBUILD bamtools-9999.ebuild 1273 BLAKE2B 9ff546267edeb8dfb4ebd0abd9664768dbeec6d5b03465dba3d17b5906da4895de354800a078ae76e53940a2f36754e560fd3f734956af4ad670f33400b36630 SHA512 66086024be16d409775722903ab5729a21f24914c0e8e52cde30604f15cd65a6292f35b7193f57b449dcf53b2494ea37a47edf8b1b14aca345a5df6f8fde53cf
+EBUILD bamtools-2.5.1.ebuild 785 BLAKE2B 61817ce7752bc30d318b0e15bb69f8e6a43c30e6703fa782c85937f29e7cab09354d475e397622896f8d1b4cde28648b09d230813f0eb21f2e463b3aab0381fc SHA512 b1591b8d207e6a97b2e5189197b184203dc61f1a3da6ac94016ce75f6eeb65872f2ff0a16a150c0372d49f475199abb21f2b15a03ada0dc3ecb33b069efe0659
+EBUILD bamtools-9999.ebuild 785 BLAKE2B 61817ce7752bc30d318b0e15bb69f8e6a43c30e6703fa782c85937f29e7cab09354d475e397622896f8d1b4cde28648b09d230813f0eb21f2e463b3aab0381fc SHA512 b1591b8d207e6a97b2e5189197b184203dc61f1a3da6ac94016ce75f6eeb65872f2ff0a16a150c0372d49f475199abb21f2b15a03ada0dc3ecb33b069efe0659
MISC metadata.xml 881 BLAKE2B e7feabf909d8dbccc784cd2e94d07882d700433e773ac51928b796f4bfd22a7e8de7a4d99268dd8ea0f8d36683f5bbe9f3c4fcba37fc85c284f49b9ad7d413e0 SHA512 4922e3edaa65c7981b8656245287e4c4d613f8ba6d6b63131fe9e5183f8119eab5501e354ad80d37d8f61f56d86513af2aedd2b086e5da3d1ab48b3aef57a18c
diff --git a/sci-biology/bamtools/bamtools-2.5.1.ebuild b/sci-biology/bamtools/bamtools-2.5.1.ebuild
index 84c9dc837233..b5affe9f0fa9 100644
--- a/sci-biology/bamtools/bamtools-2.5.1.ebuild
+++ b/sci-biology/bamtools/bamtools-2.5.1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2018 Gentoo Authors
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
-inherit cmake-utils multibuild
+inherit cmake-utils
DESCRIPTION="A programmer's API and an end-user's toolkit for handling BAM files"
HOMEPAGE="https://github.com/pezmaster31/bamtools"
@@ -18,7 +18,6 @@ fi
LICENSE="MIT"
SLOT="0/${PV}" # no stable ABI yet
-IUSE="static-libs"
RDEPEND="
>=dev-libs/jsoncpp-1.8.0:=
@@ -26,35 +25,9 @@ RDEPEND="
DEPEND="${RDEPEND}"
BDEPEND="virtual/pkgconfig"
-pkg_setup() {
- [[ ${MERGE_TYPE} != binary ]] &&
- MULTIBUILD_VARIANTS=(
- $(usev static-libs)
- shared
- )
-}
-
src_prepare() {
# delete bundled libs, just to be safe
- rm -r src/third_party/{gtest-1.6.0,jsoncpp} || die
+ rm -rf src/third_party/{gtest-1.6.0,jsoncpp} || die
cmake-utils_src_prepare
}
-
-src_configure() {
- my_configure() {
- [[ ${MULTIBUILD_ID} == static-libs* ]] &&
- local mycmakeargs=( -DBUILD_SHARED_LIBS=OFF )
-
- cmake-utils_src_configure
- }
- multibuild_foreach_variant my_configure
-}
-
-src_compile() {
- multibuild_foreach_variant cmake-utils_src_compile
-}
-
-src_install() {
- multibuild_foreach_variant cmake-utils_src_install
-}
diff --git a/sci-biology/bamtools/bamtools-9999.ebuild b/sci-biology/bamtools/bamtools-9999.ebuild
index 84c9dc837233..b5affe9f0fa9 100644
--- a/sci-biology/bamtools/bamtools-9999.ebuild
+++ b/sci-biology/bamtools/bamtools-9999.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2018 Gentoo Authors
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
-inherit cmake-utils multibuild
+inherit cmake-utils
DESCRIPTION="A programmer's API and an end-user's toolkit for handling BAM files"
HOMEPAGE="https://github.com/pezmaster31/bamtools"
@@ -18,7 +18,6 @@ fi
LICENSE="MIT"
SLOT="0/${PV}" # no stable ABI yet
-IUSE="static-libs"
RDEPEND="
>=dev-libs/jsoncpp-1.8.0:=
@@ -26,35 +25,9 @@ RDEPEND="
DEPEND="${RDEPEND}"
BDEPEND="virtual/pkgconfig"
-pkg_setup() {
- [[ ${MERGE_TYPE} != binary ]] &&
- MULTIBUILD_VARIANTS=(
- $(usev static-libs)
- shared
- )
-}
-
src_prepare() {
# delete bundled libs, just to be safe
- rm -r src/third_party/{gtest-1.6.0,jsoncpp} || die
+ rm -rf src/third_party/{gtest-1.6.0,jsoncpp} || die
cmake-utils_src_prepare
}
-
-src_configure() {
- my_configure() {
- [[ ${MULTIBUILD_ID} == static-libs* ]] &&
- local mycmakeargs=( -DBUILD_SHARED_LIBS=OFF )
-
- cmake-utils_src_configure
- }
- multibuild_foreach_variant my_configure
-}
-
-src_compile() {
- multibuild_foreach_variant cmake-utils_src_compile
-}
-
-src_install() {
- multibuild_foreach_variant cmake-utils_src_install
-}