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authorV3n3RiX <venerix@koprulu.sector>2025-04-04 01:34:29 +0100
committerV3n3RiX <venerix@koprulu.sector>2025-04-04 01:34:29 +0100
commit74dcbf5a63cafe2678e2a397e1002dd691425200 (patch)
tree5e08b1abdce069a7da83f1ca4cbe2ae4af56b161 /sci-biology
parent476528d7a16cfe2435b30ebd74783eea6925db5f (diff)
gentoo auto-resync : 04:04:2025 - 01:34:28
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/Manifest.gzbin19008 -> 19009 bytes
-rw-r--r--sci-biology/biopython/Manifest4
-rw-r--r--sci-biology/biopython/biopython-1.85.ebuild (renamed from sci-biology/biopython/biopython-1.81-r1.ebuild)9
3 files changed, 4 insertions, 9 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz
index 360a3f6a92b6..178954ee8e4a 100644
--- a/sci-biology/Manifest.gz
+++ b/sci-biology/Manifest.gz
Binary files differ
diff --git a/sci-biology/biopython/Manifest b/sci-biology/biopython/Manifest
index a6a0a147630b..b0344d72d64c 100644
--- a/sci-biology/biopython/Manifest
+++ b/sci-biology/biopython/Manifest
@@ -1,5 +1,5 @@
AUX biopython-1.81-python3.12.patch 472 BLAKE2B 1c4b1c777e6bd7b80503b6a820caa9aad5601337a91c3275c3c7e97060a4f38deac9db77edb3d6ce76f3c20b883cc8c8301fe8cccba311c4280a99fc3264b8a4 SHA512 5e563b40e4278913a4f559b25e60b4b8909240fd367a66c1e43e1c525684482a928748838519a627bcc67c5c9bbd44537192bccf6813f8ee80bcc456af6d9bc9
AUX biopython-1.81-reportlab4.patch 1068 BLAKE2B 1d2c2bf7929f5741f1bcae083d9842b16badba53f3be8fd3352b2b437a670b5032d146dc18610b7b360d503ad6613e9f0632457b8134392e8507900eff191526 SHA512 a576b12b8673471c27c8582f5ecb00ddf4b729a749af21a9ba67c6972dd5e9a535d7116b0ad7d06a5b89ff5b26d042914d23b1909b1081e1226df334e62d57f9
-DIST biopython-1.81.tar.gz 19324875 BLAKE2B be3a85f5b60638987d6186af498411b494f8d27389f24cd1b9e658bc6b1a29c799ec8b20a9ac0b955c6d4c239706f4dbb5b75f6d56908f63d731b1d56c9fd587 SHA512 1595fad6631bfb6cf4e1a92ed72e6093e2a0c24f3c0bd4182267ec9742fb03dff16099eedde139598aa6b5b8380bbac9e48246cb9ab8b44109333d60adfd00ed
-EBUILD biopython-1.81-r1.ebuild 1628 BLAKE2B c7d242753c209922b83fe1f5ba38e33008fa2669c66a0b101591262ee34ff4b0ba38fd5e350bb45c234ef80a42c954ab9750e5ab7c5845f6c8daf48f7a55a181 SHA512 0a8cca5a42fe265ad3ee97a15cb42bf8c8a47cf10eb862a2094dd601595e017653927a7df18fb86b03a057b17c4e60282b8b88941241291d030524f751ef38f5
+DIST biopython-1.85.tar.gz 19909902 BLAKE2B 796b3989ddda5d6e01952b790e3591f9d32b006348210e09e6be8a9a34f9fa81731325d9c0a022a6ff95da0349991d1e1e4c6ae6c1411db3ca10ef61f97bc713 SHA512 a9bff4fdf34f71f74f35a9bbf25887d6fcf84622d77854e11b0da418b6ff88c7d6e49474d82ca2e4da782ea07cc28f03b43b219b798a806ab02e11af21cd9dab
+EBUILD biopython-1.85.ebuild 1541 BLAKE2B 23af771ddcd3400779ebad7147dbe345251e3e6a3273f4f58c8cdacecf0f4c951b8350033da48b392d60e4f5e8c74f004c9b4342ccb121321701dffbf8590377 SHA512 9b9c3038c9a0e15442ff1bef56e491ecc98619f13aabc34ed6dc9a0dee17c7b276810b880691b2eeb33054203b93d7f8ec98783225185b5531f17340979b9680
MISC metadata.xml 334 BLAKE2B 4d97c23444fdddcca57631fa2ddf4a11cfcef0accf91db65071d520f6601c0626e290e67cbf162abdefe7a74f4b410f8366a23186fc417e1fab7e9ce157d7610 SHA512 a870bd044d0e0d4e2a0c48b50f710845c6269e038790243f1d1de65b1252fd653f0f403fc55b98946df8eb27f24dfae5c84f52fcc38c969afcbdb548ccbb7a59
diff --git a/sci-biology/biopython/biopython-1.81-r1.ebuild b/sci-biology/biopython/biopython-1.85.ebuild
index 96d83b74b492..99eb4782d5fc 100644
--- a/sci-biology/biopython/biopython-1.81-r1.ebuild
+++ b/sci-biology/biopython/biopython-1.85.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2024 Gentoo Authors
+# Copyright 1999-2025 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
-PYTHON_COMPAT=( python3_{10..12} )
+PYTHON_COMPAT=( python3_{11..13} )
DISTUTILS_USE_PEP517="setuptools"
DISTUTILS_EXT=1
@@ -29,11 +29,6 @@ BDEPEND="app-alternatives/lex"
DOCS=( {CONTRIB,DEPRECATED,NEWS,README}.rst Doc/. )
-PATCHES=(
- "${FILESDIR}/${P}-reportlab4.patch"
- "${FILESDIR}/${P}-python3.12.patch"
-)
-
python_test() {
cd Tests || die
"${EPYTHON}" run_tests.py --offline --verbose || die