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authorV3n3RiX <venerix@redcorelinux.org>2019-02-10 15:40:27 +0000
committerV3n3RiX <venerix@redcorelinux.org>2019-02-10 15:40:27 +0000
commit6bc2e4d7c5906e46a8f275a876ead6ec41aca5bb (patch)
treecee0a97398040001220ece3cd48c3d568bcddb4a /sci-biology
parent1db00cc6e94b90c08090bb5b8c406622946c4ae5 (diff)
gentoo resync : 10.02.2019
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/Manifest.gzbin25289 -> 25306 bytes
-rw-r--r--sci-biology/consed/Manifest2
-rw-r--r--sci-biology/consed/consed-29.ebuild6
-rw-r--r--sci-biology/phrap/Manifest2
-rw-r--r--sci-biology/phrap/phrap-1.080812-r2.ebuild4
-rw-r--r--sci-biology/phred/Manifest2
-rw-r--r--sci-biology/phred/phred-071220-r1.ebuild4
-rw-r--r--sci-biology/repeatmasker-libraries/Manifest2
-rw-r--r--sci-biology/repeatmasker-libraries/repeatmasker-libraries-20120418.ebuild4
9 files changed, 13 insertions, 13 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz
index cb16777b6fdf..dfe16f3674cb 100644
--- a/sci-biology/Manifest.gz
+++ b/sci-biology/Manifest.gz
Binary files differ
diff --git a/sci-biology/consed/Manifest b/sci-biology/consed/Manifest
index ee33e813846f..9694dbfdb96e 100644
--- a/sci-biology/consed/Manifest
+++ b/sci-biology/consed/Manifest
@@ -4,5 +4,5 @@ AUX consed-29-fix-perl-shebang.patch 17375 BLAKE2B e34a358569d594f4ab60fc3745a6a
AUX consed-29-fix-qa.patch 11168 BLAKE2B 139b52d402f27c8121a43f933a181aabf150c0c8836f2facc7b42909db3808fab1ceede30956d6b3c2462ad31b43e054c0bbf8552e57e6e41479d25eb111738b SHA512 088d774159b421666bf75f6f9f17ee83d488625d482d8d404bde12671025b1f03322bee5c50e792fbbd822c223fa5ee697cf99c7efc9fcbebc119314d02df604
DIST consed-29-linux.tar.gz 36172715 BLAKE2B 6706576b404c0bccb7ed28ab6fe2dec86fdac6f7651406d3f30e35caac3e49a66b4762edace2133d2dfb776bbeb730b74797c7323deb950f2648a46c4594fe98 SHA512 63a95d84cb58009045a9d898c8b1a94f98516bed9189f624a5930338cc8f51562504257f309d945fafcc07e0811ffeea122b640789f75fbd6c94535178dab4dd
DIST consed-29-sources.tar.gz 3258845 BLAKE2B 508763ff2a240047cff0a43ba4b9b9a7f9302c0a023478c6b08f86bb77fb2c12a62a9b16165fe6257fe6c86af853dabe279bd9e05632c3e112e3fb7fad2c6bd3 SHA512 fd711a65a02ef1238cca12b90fe7fa9b67da6c37d43cd105f38c7b6475fbc073c1f4d7f99703dec9d3a0a7a2a9317cb14999a114bb6f52589cb9b6e34700eb93
-EBUILD consed-29.ebuild 2701 BLAKE2B 0eaed4ffca6daa9921ab782b00e34f207ff235e94ed2cff0147921c037667d30af200141b61ca91c9e386f5f9672566ba92e3dbeb8c2bef965f9ab72cbf2c27d SHA512 56d73a2d4ed207924c2a7676bfca84b8c0cc4f80d1a2a1b94fa2b3d644a6583f15e32ee81b9892122e051f17a1eda56d63ffb8d650283a9bee5c61bca6faf1d3
+EBUILD consed-29.ebuild 2727 BLAKE2B 09c3d1619c7c751c1b084bcf1bc25bd87cfa23f4d83b0b6432b9229f7ecbd05c4a424522f6cc4117d571fa2ce34dbde805b4d0224a95db5af0f200e21688b1f3 SHA512 86160fe6b03dcfddc756c3f6a5c15bcbfe6a94b3002fe4deb39157adfc445a52ee557fa7732f07711a6859357c475bc31cfa535563cb91efee4511281fdef854
MISC metadata.xml 267 BLAKE2B 7cf386952842945148119de3263231db4d1046d5f54811f7e303ed8ec4d27cbc1960b99c92daf6f32e5b981c2fb9f50ec666be6193865d6e18541b7427a152a9 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403
diff --git a/sci-biology/consed/consed-29.ebuild b/sci-biology/consed/consed-29.ebuild
index d5417e310281..32eba4cb16d0 100644
--- a/sci-biology/consed/consed-29.ebuild
+++ b/sci-biology/consed/consed-29.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -45,10 +45,10 @@ PATCHES=(
pkg_nofetch() {
einfo "Please visit ${HOMEPAGE} and obtain the file"
einfo "\"sources.tar.gz\", then rename it to \"${P}-sources.tar.gz\""
- einfo "and place it in ${DISTDIR},"
+ einfo "and place it into your DISTDIR directory,"
einfo "obtain the file"
einfo "\"consed_linux.tar.gz\", then rename it to \"${P}-linux.tar.gz\""
- einfo "and place it in ${DISTDIR}"
+ einfo "and place it into your DISTDIR directory."
}
src_prepare() {
diff --git a/sci-biology/phrap/Manifest b/sci-biology/phrap/Manifest
index 0905e1e9256c..b0ce2473c1f3 100644
--- a/sci-biology/phrap/Manifest
+++ b/sci-biology/phrap/Manifest
@@ -1,4 +1,4 @@
AUX phrap-1.080812-fix-build-system.patch 3600 BLAKE2B 29a7846cd6394d17b35e525220b8ead461a22ab0f1301ae5668da36605649c07f23040c4c134424802d4da6e0c3b48fbbb05ec5708de50b33f024e4ba702ac49 SHA512 536ad862b9b8ce0fbc7ab67bc48db597e7d4b8c66018a5abefe5a59f4fbc30a4a76c94f4c13f5af7d42a422a22f5181d8f015b797d37f175238c3d4170adf21c
DIST phrap-1.080812-distrib.tar.gz 317350 BLAKE2B 9cc53d05184b4a55a9a80e6112498f91a622b98a853b255daedd57c892b7c2bb8ef3091ed3d141e297864c158b7e03d02313a272448d2e0fb80e1c51a906e00a SHA512 6b125b9a99b6180eb5de16bccfe068abefdb59237fd3295924c418749f2f2d6e39cdbcecc6786e42738846975334c4d8a645eae8fd0fcbda6b0e99241deb15ca
-EBUILD phrap-1.080812-r2.ebuild 950 BLAKE2B bf8ecd534bd6f9dc99eb815e17196a23fbfd5a3caae7fc3ff024f188e73d061787f140350fd4bff042d5aa5663f52ea91e62b3e95eb56387eb225335181e6bb5 SHA512 4857f1fe337f24ee33618e3dac40a5edb7210d1353c058b57a1263a4ccdd8213270827c2c2f902d454226fc65368a1588d497dcdcf2eb9c15af406d1d5cac3fe
+EBUILD phrap-1.080812-r2.ebuild 962 BLAKE2B 42c56565cc83f792878f8dac26badf57a7307d63dae27684a7799c6607521b5e564d0b21f49a7669ed291e0facd502b9745aec1a643226e9ac9ec8e0031d9d76 SHA512 abbc494349976d3a6371a424b4a6bce60e30f7963db4d05976a59c88cf0def994b690f8746d34db683629eb171322ebbcb2aa9325e746adeec9afd575468bc92
MISC metadata.xml 267 BLAKE2B 7cf386952842945148119de3263231db4d1046d5f54811f7e303ed8ec4d27cbc1960b99c92daf6f32e5b981c2fb9f50ec666be6193865d6e18541b7427a152a9 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403
diff --git a/sci-biology/phrap/phrap-1.080812-r2.ebuild b/sci-biology/phrap/phrap-1.080812-r2.ebuild
index 6cccc6c61bf0..08ea5a1fb71f 100644
--- a/sci-biology/phrap/phrap-1.080812-r2.ebuild
+++ b/sci-biology/phrap/phrap-1.080812-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -27,7 +27,7 @@ PATCHES=( "${FILESDIR}/${PN}-1.080812-fix-build-system.patch" )
pkg_nofetch() {
einfo "Please visit http://www.phrap.org/phredphrapconsed.html and obtain the file"
einfo "\"distrib.tar.gz\", then rename it to \"phrap-${PV}-distrib.tar.gz\""
- einfo "and put it in ${DISTDIR}"
+ einfo "and put it into your DISTDIR directory."
}
src_compile() {
diff --git a/sci-biology/phred/Manifest b/sci-biology/phred/Manifest
index 5c9b996c45e9..4b01262916ef 100644
--- a/sci-biology/phred/Manifest
+++ b/sci-biology/phred/Manifest
@@ -1,5 +1,5 @@
AUX phred-071220-fix-build-system.patch 1981 BLAKE2B 0c9ae75ecf54eadd1d6cd3cfeed5d2f949f234b77d4f329133e2c176207410e93a35341c43636c5b2f742a2ee2d20825cf79bb65d5dac43ba28fc07f7c6bb69b SHA512 7647f6f6e9a1ae51cbf1aa3e39b337288e22fc26a95fdd88f92ce43fc6c0ef6ff59ec26919d14dfefff70be48e4a5604ddefef98bddf5d1d14d1e656665c878d
AUX phred-071220-fix-qa.patch 787 BLAKE2B 79f687dc1e51dd51e9f97886e0ada9b515d7e4255dff0ec3e81dccb2103ba8b4bee691c8a5b9a321cbdde5576fe8d80dbadafdb740c2cdee81fe9748255084ab SHA512 27811a834358d0e1bf8281882e0420e0eb6bd9586871c8c72a4de79badc9539ea8e9258b9c3a3bf8ca1d3f6924d61abce2dcc0c0ed3b64e5fa53d4548109f5bc
DIST phred-dist-071220.b-acd.tar.gz 357767 BLAKE2B ae1180f54eaa3631a4e32c2ffe388b35745302e3d014c8fa893119e7e488d4bb4316f7ee0588cd12db5cbbc23033f689f4a0a487cdc7fe42e8c7a67ceb3c43ae SHA512 0a6b0a733e6dcc0495eaab720b75f8e5815df494d0a773b8b8336d5208321c2ba475921084835a769367ec51aed156585ab97346a510100d4337e3215ec75276
-EBUILD phred-071220-r1.ebuild 966 BLAKE2B 1d01310018b354843d7650a15f70b6ae5005f4ffa70fcbd270f88e02e9dea837e972c28d771a8926eb7c68faca87d475c2e79fc0332007214b37ce88d9817479 SHA512 203ced3280f1c1bced57a1cb514533b71df1c2c9eefc94e594f61d45300da32617ff6023196d47cab7a1ca21bef61392760f5a12f25815ac5d78b9a8c58e7e91
+EBUILD phred-071220-r1.ebuild 978 BLAKE2B c2262024808c5f0fe203ff301964ae0b546de279199cdc1ed9c7ab3ee89e5d68f6285e4726bb9a28f8e22091c177918103dc06cde7501e7ce2b4ee5b78f313c6 SHA512 f66790ce585e4747c4db2eab8cb4c2be63da903510d64bb395ec74173a8b150524ed7ae1149ccd78876dfafb59bbcf2572cbff3bd5b4cab8642112b26a151482
MISC metadata.xml 267 BLAKE2B 7cf386952842945148119de3263231db4d1046d5f54811f7e303ed8ec4d27cbc1960b99c92daf6f32e5b981c2fb9f50ec666be6193865d6e18541b7427a152a9 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403
diff --git a/sci-biology/phred/phred-071220-r1.ebuild b/sci-biology/phred/phred-071220-r1.ebuild
index e09c456b27d9..bf7a0c7338cb 100644
--- a/sci-biology/phred/phred-071220-r1.ebuild
+++ b/sci-biology/phred/phred-071220-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -27,7 +27,7 @@ PATCHES=(
pkg_nofetch() {
einfo "Please visit ${HOMEPAGE} and obtain the file"
- einfo "${SRC_URI}, then place it in ${DISTDIR}"
+ einfo "${SRC_URI}, then place it into your DISTDIR directory."
}
src_compile() {
diff --git a/sci-biology/repeatmasker-libraries/Manifest b/sci-biology/repeatmasker-libraries/Manifest
index 75681cc74b2a..a11add8140fa 100644
--- a/sci-biology/repeatmasker-libraries/Manifest
+++ b/sci-biology/repeatmasker-libraries/Manifest
@@ -1,3 +1,3 @@
DIST repeatmaskerlibraries-20120418.tar.gz 28059668 BLAKE2B 0683305f0d3045ff1bcb9f1c952d3c12e92a3003f79ba18a16334805049a64e0b307fac2cf7fad236c9b0cab80e3317ebb1d93bf6487bafd9d45de2455565879 SHA512 254d47faeee72ee62e6854ebc389578691d66e99d9d5e2a0c2462bf752ac5b4d2171c9e6b45d4f87f548a96b62753bb9c37c2d2c00e06544e91dd09fe2bbfe32
-EBUILD repeatmasker-libraries-20120418.ebuild 760 BLAKE2B 3e4019a480811b8cfd18a5bb822e3f7061b8c49a3361f1db2bc2b8f9c7e610442a3924a0ddea1b7cefe55353dca39edd433cfda0feaa32da5416805ddc7d8b65 SHA512 ceb9b66624d509e9c6f3750d7a51d707e7b626dc3c15fe09d84be632f68ca8d0bcbde25b9b5dde4919af2449ea25877931f751f5934e2fbe7f1db0b394ef5cc0
+EBUILD repeatmasker-libraries-20120418.ebuild 772 BLAKE2B e862447ecb7252ff0c0d7c034413a72ea245684f29e97d79092a56ced93fc4fe4fd7e40b28c021771dae3dd0173c86f9be4e3b3bdc6d0b87799b819f2830e4b4 SHA512 08ac03023c4384fb1f1eacdb34db3bd07563bbbeeb2d2e7df30f6567095a655b56bbf43946a25f2d3747f57566d1521d948804c24d2edcad739d084ad1cae9d9
MISC metadata.xml 267 BLAKE2B 7cf386952842945148119de3263231db4d1046d5f54811f7e303ed8ec4d27cbc1960b99c92daf6f32e5b981c2fb9f50ec666be6193865d6e18541b7427a152a9 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403
diff --git a/sci-biology/repeatmasker-libraries/repeatmasker-libraries-20120418.ebuild b/sci-biology/repeatmasker-libraries/repeatmasker-libraries-20120418.ebuild
index dd8c2687a1bd..aefecb784ba2 100644
--- a/sci-biology/repeatmasker-libraries/repeatmasker-libraries-20120418.ebuild
+++ b/sci-biology/repeatmasker-libraries/repeatmasker-libraries-20120418.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -23,7 +23,7 @@ pkg_nofetch() {
einfo "Please register and download repeatmaskerlibraries-${PV}.tar.gz"
einfo 'at http://www.girinst.org/'
einfo '(select the "Repbase Update - RepeatMasker edition" link)'
- einfo 'and place it in '${DISTDIR}
+ einfo 'and place it into your DISTDIR directory.'
}
src_install() {