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authorV3n3RiX <venerix@koprulu.sector>2023-05-26 03:07:48 +0100
committerV3n3RiX <venerix@koprulu.sector>2023-05-26 03:07:48 +0100
commit5923f7107d7596f9ecb6a86b451105462668601c (patch)
tree57ebb2966a1787500108baf49e27b002aaaed0ce /sci-biology
parent633591ecdf876d163972f90145c0ca61e6c496fa (diff)
gentoo auto-resync : 26:05:2023 - 03:07:47
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/Manifest.gzbin19482 -> 19479 bytes
-rw-r--r--sci-biology/clustalw/Manifest4
-rw-r--r--sci-biology/clustalw/clustalw-1.83-r4.ebuild2
-rw-r--r--sci-biology/clustalw/clustalw-2.1-r2.ebuild2
-rw-r--r--sci-biology/mrbayes/Manifest4
-rw-r--r--sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild2
-rw-r--r--sci-biology/mrbayes/mrbayes-3.2.7.ebuild2
-rw-r--r--sci-biology/primer3/Manifest2
-rw-r--r--sci-biology/primer3/primer3-2.3.7-r1.ebuild2
-rw-r--r--sci-biology/rebase/Manifest2
-rw-r--r--sci-biology/rebase/rebase-1901-r2.ebuild2
11 files changed, 12 insertions, 12 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz
index 351497b6717b..8f49144101ac 100644
--- a/sci-biology/Manifest.gz
+++ b/sci-biology/Manifest.gz
Binary files differ
diff --git a/sci-biology/clustalw/Manifest b/sci-biology/clustalw/Manifest
index d26b15faea9f..b02851cb1dc1 100644
--- a/sci-biology/clustalw/Manifest
+++ b/sci-biology/clustalw/Manifest
@@ -2,6 +2,6 @@ AUX 1.83-as-needed.patch 800 BLAKE2B 37db9a8c0f7b5db47065f5c6e01cefc095363e30a5f
AUX 1.83-clang.patch 162 BLAKE2B b4ed2add1aaf33ef3d3138124377ed88bbe030b2e50f24e7dc87717fd06e3f76c6660c518d60083520f13b2349a1051a3981605e6130e0632e112212af345f51 SHA512 0e9aa3e61194f6d35449544c31693ee9f23ced8460b6ef4eca45b7f969867a6de04b898531e2749e65ee353547bd6fd3f19b7ee29d202ca30b5043567bf045bd
DIST clustalw-2.1.tar.gz 350761 BLAKE2B 479acb42ec0b0adee8e04e99132a782c947a1261f48e674c6a11e4f38e44e5709d03f0c864f0cd3cf7eb4faf76a36b6121c3e3d3573c86ee3895971df07f1a58 SHA512 659cfe0121015dd2b84578b1a0a7f016fc944de155686b9bdef31122200a21e792203f3a6ab93a31676a50ffb70858b506ceb7ac27d921189a8381dbe0887921
DIST clustalw1.83.UNIX.tar.gz 166863 BLAKE2B a3b1eabad8bc736cde4655f13fa8544759b7b5c50ea97fd45ee0be45ac6c361db5ced8ad21622ac2530b57c37c77dfd67657afd2c411acbfb7ff2a3ba014637e SHA512 c0cc9ebf4c8869be819065546b499b547990342c87425fae8f921a141704343f2a518ecfc2b8bfd527061902825fc5befcb2cd080c83ba887390e48338c9dc1a
-EBUILD clustalw-1.83-r4.ebuild 824 BLAKE2B fbe940a15f3649f3e89bec7fdeed8b2a51b16441c449cfda705a43a632e4125f8ca2aec47efd3dc6c191c9ed4053a82026b3ec6c4a4ef43289ef357bdd9ec277 SHA512 0a5dd3fef90b72aa869104686af477297cbd9dc8c32bd13b2a8f330f161679d41add9ff94198189f32188b82bd9efad74456f0a1b472b323eded33985785f216
-EBUILD clustalw-2.1-r2.ebuild 479 BLAKE2B 2b8cdab7e004824ca9e515d114e49f21abed58bed18229a407e861f4756377771345c9971e5945c258a5d7891f052245443b1f731fc231cc7fe7154f38ab1422 SHA512 16d6478b5ed34f0aa7ac3441cf8b49820ef74e46315363078f82227c865067d950c24c41d309192520adae15b72916fbc3a3e5a12e439d4437effcb9f0d43b7d
+EBUILD clustalw-1.83-r4.ebuild 809 BLAKE2B 8641c9cd2b8e14b99bc6b59a5c90adc58682f209fd6a34b293d53dd167d9dc4152cc61c310fbf5fe7a7d3f17d8eb90aafc8e07f4865c7366805546bd1a31051d SHA512 9d56c56216a3d610f53ceaa64ca199825047337915959ea458ffc1adae11b83ae699bb35d041281accc917d0aa18ced1ffb0d6d765ee1c763115fcc0900361bd
+EBUILD clustalw-2.1-r2.ebuild 464 BLAKE2B 89efbdc8c9d83fc90e5ff611ae3f0f93c236c4d706048517a513bfe8e7d4ee22d7e996683ae4ffa404a91c2c984d1aaf2ca52167076b7155fe37a01c37f940a9 SHA512 e9f1cacef31985fa1b1b48d05d2bdbc21c54fb4d8bbd677bb742d03e811afbf0868d365f72d675e34b1fb798166db3678c437b2dd50a7f4bb68f37d349b48743
MISC metadata.xml 268 BLAKE2B a4d67334cdad8626d60e46b677ee1c83f569e5e20b3739a7664bb33be1829f8478af35e135bf734a6ff151b8543ea6c4ecafbf822cee8189f7e7096bd9698711 SHA512 59d3d8213b1a219396b74b6f4188c01e1cb4eb1c63e6792ce1e7fdb8000d1a4625919337ff77288ca7f7e07d9753f481d2381a06f554012633cd678194c980de
diff --git a/sci-biology/clustalw/clustalw-1.83-r4.ebuild b/sci-biology/clustalw/clustalw-1.83-r4.ebuild
index 62c59747adf3..fe20213ae7b5 100644
--- a/sci-biology/clustalw/clustalw-1.83-r4.ebuild
+++ b/sci-biology/clustalw/clustalw-1.83-r4.ebuild
@@ -12,7 +12,7 @@ S="${WORKDIR}/${PN}${PV}"
LICENSE="clustalw"
SLOT="1"
-KEYWORDS="amd64 ~ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
+KEYWORDS="amd64 ~ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos"
PATCHES=(
"${FILESDIR}"/${PV}-as-needed.patch
diff --git a/sci-biology/clustalw/clustalw-2.1-r2.ebuild b/sci-biology/clustalw/clustalw-2.1-r2.ebuild
index 58a28e3ef7a5..15c658788b5b 100644
--- a/sci-biology/clustalw/clustalw-2.1-r2.ebuild
+++ b/sci-biology/clustalw/clustalw-2.1-r2.ebuild
@@ -9,7 +9,7 @@ SRC_URI="http://www.clustal.org/download/current/${P}.tar.gz"
LICENSE="GPL-3 LGPL-3"
SLOT="2"
-KEYWORDS="amd64 ~ppc ~ppc64 ~sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
+KEYWORDS="amd64 ~ppc ~ppc64 ~sparc x86 ~amd64-linux ~x86-linux ~ppc-macos"
src_install() {
default
diff --git a/sci-biology/mrbayes/Manifest b/sci-biology/mrbayes/Manifest
index 086bad570699..9f1764971060 100644
--- a/sci-biology/mrbayes/Manifest
+++ b/sci-biology/mrbayes/Manifest
@@ -1,6 +1,6 @@
AUX mb_readline_312.patch 586 BLAKE2B 6505a8d9fc40c0470264b6e293f2f4e51a5d6b4a73dfeaff747e2f4acd122369d810cdc86ae0d7cead3a3741cfffc02080c07618c2847985553322a1c9bf79b5 SHA512 8427c83ccb98c0b57274914d8f0d0f539ace7dbc475eb10bd586762efa3465b595b91907b55d6809b94e6b9c4f65aa139bc16a7d81b1c76f7623eae46d495aa8
DIST mrbayes-3.1.2.tar.gz 545968 BLAKE2B f4c5bbdde765fb9e596c17d5fd890b168c22cefb0d24b67c1c68623e1dcfa4df716a896fe120f7a1cac4234125b6ed524973506e47492ba3ec26e389783d618a SHA512 2fb0ee7224cbb69c1acf2ffb0c6c8974f63002cda4f39a626eadf80fad9cfc23861f8c03f5545970f3a81e02093d62b6a0549ab7d7f7080557e91e21b2c3ee14
DIST mrbayes-3.2.7.tar.gz 9787214 BLAKE2B 2d0ebbc376712e15fc1ed146053d977ad1af96f44c31b8fd0fdbd47ef9bafc41cbb8904db94bc8d30c753c0267a1dcce0d08c73d8b35c20e0f15206bc8fef6ff SHA512 4dc869cd07cf384b3a3945ac8d91a7cc2982e8c5cd8d1f097b46a479a071cb71e71c60e152aa4fc01b0bb296295c5fa9f5a48aa8e913b920c33e30cbb3a6ed37
-EBUILD mrbayes-3.1.2-r2.ebuild 1348 BLAKE2B 13a4de8a02927f7f8723e86a12756f8b8ec79de76bc8bc4fc3642897c959b42dfce774dae3b936cc9f19b481ad704a1e5550c7b91e6531f2f614cf0f3048abfc SHA512 fd64437d3d90aaa27676b2fee0c126e7fcfced953b8ac6e07f8ab1fbec0014b808ca96f337bb1d15571536822362a111126d478dfbcd841e9bead49fde687da1
-EBUILD mrbayes-3.2.7.ebuild 1533 BLAKE2B 6c5039d1cd8622700e1ccfcc94123bbf02561e4845394b4548eb137f74313b03c76c728089d65561c547197b5cfa3661f1e265d6b1a9acc4ff86db9196dfd2b7 SHA512 11c760fcc89c0585b3bc1f2cd8a71fba42c76180da7373c819b30d7d0cf46baad167bb065f096c1d7ad3df1f4b2dd87f6c75116a2cbf7d4eb1474ba395bb49ab
+EBUILD mrbayes-3.1.2-r2.ebuild 1333 BLAKE2B 035f7c449670674dcfdb158a6b6ea96a03df32d3e72ecf42ebde5b3f6756aafab4ec042bb36cc42826cb6cfd06bf0d4ea77924288d7adfab0af2b74116567875 SHA512 4091068e40f41a6a2bbc1b6e6d91f9f1d557d25890e3352f3584c84d0e821519ff7263c39dc454cb0f564e2d83c3b4d9552c4346ed59e5859805c5fba60e4a7a
+EBUILD mrbayes-3.2.7.ebuild 1518 BLAKE2B 1179623e2f7bb9f31d26713c7ead2b82b430a47ffc5a9b705c20999b82947da1e6d9ea7859ddf91802cc77d35a811a0ed70a322a88478871e1f2071e0d1fe197 SHA512 286bc8ea2cc8d9cb40c7e13a7bc7a2437aaffd4799bcf7a2825e6634dcf7c15044a3b0e71d665dd55b31f4475add8f233dba60bf9ed65fae4b339d6456e6242d
MISC metadata.xml 964 BLAKE2B 6530733a29250579b0981a2712a8878094f1b347951d8c565449d46e1dcfd28459b9cfbc82d4cd6e79ee2e06d275673227c068a1b57bea3edec024dbbf3895bd SHA512 e5f7e98b69c437e3ffe18ca05d2dbefa1aaeee6b630e481b346576d46edd35784f174953b4616f7463d561bb8dae962288c9f9180967fc845c43bf29525aa47a
diff --git a/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild b/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild
index 57c39ea21a94..1174d0de599e 100644
--- a/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild
+++ b/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild
@@ -11,7 +11,7 @@ SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="debug mpi readline"
DEPEND="
diff --git a/sci-biology/mrbayes/mrbayes-3.2.7.ebuild b/sci-biology/mrbayes/mrbayes-3.2.7.ebuild
index ad87554eb31e..4fbad2f65473 100644
--- a/sci-biology/mrbayes/mrbayes-3.2.7.ebuild
+++ b/sci-biology/mrbayes/mrbayes-3.2.7.ebuild
@@ -9,7 +9,7 @@ SRC_URI="https://github.com/NBISweden/MrBayes/releases/download/v${PV}/${P}.tar.
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="debug mpi readline"
# --with-readline was given, but MPI support requires readline to be disabled.
REQUIRED_USE="mpi? ( !readline )"
diff --git a/sci-biology/primer3/Manifest b/sci-biology/primer3/Manifest
index f6611ee55622..5e9995a11985 100644
--- a/sci-biology/primer3/Manifest
+++ b/sci-biology/primer3/Manifest
@@ -1,5 +1,5 @@
AUX primer3-2.3.7-buildsystem.patch 5855 BLAKE2B 74395e3ecaf16e10bce493337681f2ab7b2b6016bb784854777c2a00cb09f9ab1275d9955d622bdd2d887bb7763a5d2addd7064fafb00b4d2102463491a112d1 SHA512 4cc3492b1c93e2d736493fe04e18b544dc9487ded5e6ebb4bc64e19b38ca125aafa4732e80cfab83d6467ba4d8e11ca7c59342188c7e4464e9a674e7ac26c59f
AUX primer3-2.3.7-gcc7.patch 421 BLAKE2B 3f861ecb493ce9673cdebac9ea224a0588bd3b758d72a7ef4e41d4efb929db444a8c2808a55ead42dcb174265a926c021a89dd83dc8a1e5ba4eb5ed26280be43 SHA512 c818cd80e4762ef46e4e52acd27f4eb966d676995154b3503c98d8defb545c3dd7ea307c8946b5b5c462dd7f5dee6abc254cea59e21e2229cb779a7178dec04d
DIST primer3-2.3.7.tar.gz 1658090 BLAKE2B 0bc9a0faa19c4ac3b48680d65b0d91a13d8bdd651ad3a0d344b4f50ce8dc510fe7a22665192751fb2c8ff6282b560daf4540a02cc70482dba0fcc344f7727e37 SHA512 f227f80d395cb682a9d65e0ac3afdcacb8385d66e721b9163fda939a9c788a7c6907273f6223782702b48d7df66ea2331114f6303fcd29e3b3c50a2717da2fa7
-EBUILD primer3-2.3.7-r1.ebuild 1080 BLAKE2B 89a48de004236190b5708cf8e1ce256af3b6f6a5cbd1ed03b2f54bba5ff162cb88dd81117cce9737714b53ea2ad247f3d07da02b2d912006f903aabdb4d3d6af SHA512 a879dc2c2cc5b8799e05334226f1aa612c2534bb94404d3ce4d4649e6b7322890a549c56f961c869cfe3cdd2d0e613345dd70dbc11ee3e42af34fb8955c936b6
+EBUILD primer3-2.3.7-r1.ebuild 1065 BLAKE2B 0a2ef28bc0882e40384746768783a39a0a07e19fdb962d60284fa97a1873414da2732efcd5ae4110672e2748606df9cbb67a9871b9fccf0048d1647b0cf5872a SHA512 e0dcd3bbe1ef50fafa42b160f103cb8d357ecd31f7313714c9fbc135b4ee12e289d267b4d5f09a93e027009fcb513786d4bf4234e4e24bc540a7c2b7f8a19d90
MISC metadata.xml 798 BLAKE2B b57850f7ea949d9e026fba81ffb483b542f725aa96477b013ac635ef058c42fa925cc104ccac89e07cb655939364effc5193c9665264145b6d892593c133856a SHA512 1f1541c1a632b9ad37359bb60cb7e4fa4e583d9eafa10f9ec43450c30ade6ae88289ca62c793ec63da376306ab383b399ff4ab89483bcc43588aab78249100f8
diff --git a/sci-biology/primer3/primer3-2.3.7-r1.ebuild b/sci-biology/primer3/primer3-2.3.7-r1.ebuild
index b36e9291db94..3ce2c4fe5d39 100644
--- a/sci-biology/primer3/primer3-2.3.7-r1.ebuild
+++ b/sci-biology/primer3/primer3-2.3.7-r1.ebuild
@@ -11,7 +11,7 @@ SRC_URI="mirror://sourceforge/project/${PN}/${PN}/${PV}/${P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
+KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
BDEPEND="dev-lang/perl"
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 665bc16288c0..7e2fd2e3a897 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,3 +1,3 @@
DIST rebase-1901.tar.xz 182532548 BLAKE2B 5ac8d26ab057bcd21dc9c57abeb226ac70cfabb156b48a51f820789626257be55bb21c9eb2099e6e55b1cfe3691480df0ec9b3f4b18b50ba2712b986c6d057b4 SHA512 1e3553e59c3520190754cb40bb0900e466d9ffd206e6460d3262a7d7d2af8aab0e28f3e60187665362824fa3730211c0e2119016ce5fed49095f9de46c7f25d4
-EBUILD rebase-1901-r2.ebuild 1070 BLAKE2B 70c0cdcf2afd456030747dd0ec747efea96ad81021f0dcc0dbcdc058adb6084b4d34012126bd837c7ce97ffd650935c3c799b9e7a4ac693f873e694b2db29ed0 SHA512 dc110cdfa942da9c65664931c6d33d4360d36e7b0170cd00c0e8a4efdd33d3bf7397b15fd89d797d0657fb17285d1b96a5e3a40d9ec3d2d3f1a96bc5d48bcbd2
+EBUILD rebase-1901-r2.ebuild 1055 BLAKE2B ea797bdf50e0cc1b47e88376b6ad57cf4bad60f83cd9ec703208e6b98ccf65eed28c652a9b51a7c1a12f23efbadb13c5729af85adf7bdfe5cfa6190c94f42da7 SHA512 8b484238f135ebfe660bbf2e68df6b6f063a1eb6997e88067cbe503e7a1cd6159bde4da3ba6cc59b182369547a6cfafb670071dfee4a9b624e5a2133e01907c0
MISC metadata.xml 908 BLAKE2B c5b8a6f961e426788c9a6b84d01c468fa7613b52da52bf4ba4d057f0c1966ac1092acd219160e96bc2778673ebe82398471044a34e775ded0a5d72221adf363b SHA512 0c9bc87df88e5485350071b4b219dbf90958de0394444fda093fdef18ede4378c0463b6e81bd48c5c162ae0c581d186c693d3474f895a4e4de59d36c3f5a0588
diff --git a/sci-biology/rebase/rebase-1901-r2.ebuild b/sci-biology/rebase/rebase-1901-r2.ebuild
index 23224579a03b..a80aee6a3126 100644
--- a/sci-biology/rebase/rebase-1901-r2.ebuild
+++ b/sci-biology/rebase/rebase-1901-r2.ebuild
@@ -11,7 +11,7 @@ SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="emboss minimal"
RESTRICT="binchecks strip"