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authorV3n3RiX <venerix@koprulu.sector>2025-04-10 08:43:23 +0100
committerV3n3RiX <venerix@koprulu.sector>2025-04-10 08:43:23 +0100
commit3cd09a18bad26aad2645241b868755cfdf41b6ae (patch)
treeb7cf88e82bfe5ff802cf44d7eb7b58001a825067 /sci-biology
parentce375651e01b2f8fe2470091862de020c1b4420a (diff)
gentoo auto-resync : 10:04:2025 - 08:43:23
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/Manifest.gzbin19009 -> 19008 bytes
-rw-r--r--sci-biology/bfast/Manifest1
-rw-r--r--sci-biology/bfast/bfast-0.7.0a.ebuild29
3 files changed, 0 insertions, 30 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz
index 1d8d1a5596ea..175d78f31658 100644
--- a/sci-biology/Manifest.gz
+++ b/sci-biology/Manifest.gz
Binary files differ
diff --git a/sci-biology/bfast/Manifest b/sci-biology/bfast/Manifest
index 880438f67a22..dfdf2b41601d 100644
--- a/sci-biology/bfast/Manifest
+++ b/sci-biology/bfast/Manifest
@@ -4,5 +4,4 @@ AUX bfast-0.7.0a-gzeof.patch 398 BLAKE2B 16ad56feda55aea56d515b9834a01b7a9dd0bb8
AUX bfast-0.7.0a-test-sourcing.patch 1399 BLAKE2B 2cc246d437da36a28d6fd86fe8c4acb78ba06120672158c16305c108298f46f4cabf37193f793e9b32ecb8fddc022f076bc845d06564f23ed9f412f5d7c22378 SHA512 3257038564997ae1b2bdd814e893825951c9cc72934cc204d6a3cd1dd31c796d26b76b6801dca4722be3e10ac309e0d177ddf725a6b6a2c5fe01106bd35d5a5f
DIST bfast-0.7.0a.tar.gz 2456617 BLAKE2B a841e7651e731dbb3faf22eb03dce5d2008c84f9a6198204d3c41aea26626058e3a23375bc0e7e8fc142d4898e09ddbb168016c71a7b79527e602e06ec329151 SHA512 16e7ec5101c478f0dfc171016cbacb2b9240773e43b2d40eeb42d0e47afcee50a6dd5838e043a0326fc1ca9a87d3e55b42326a7f17b7c5654ef9825913860836
EBUILD bfast-0.7.0a-r1.ebuild 640 BLAKE2B ef21cc3a4c3eed6f5ae672b6f84030d350ff10a47ef9989782748b164f0d14230bb56e1e27144d5c298ce0c6d5a51562f2d959ecb62893f8f97fe267fed593d8 SHA512 401a79d1ebc2c597f3bc0012d4b504bc258dd374b4ea37c23cdfa6ba70da7553f62676570a9189136003fedb43ef2b2b33d93e64d92b231f8c6821951057ae8c
-EBUILD bfast-0.7.0a.ebuild 608 BLAKE2B eea76ad72a8017eddf0926670727b9f19c6f7e84ac3c1d1f74470e95c07a696769ad33c8393342b5d5132c8cf87a8df954180d17b7b6a6f1617764e26fc05b3e SHA512 a2e7c794d0e02240fefac07fa29ddece91010ee0677c2b5474c5541a24c4c33d5e33efcc07b9f16a2dc041eece726396f0eff54e53fd79f28e52facdc408982a
MISC metadata.xml 347 BLAKE2B fda3b1b1f01d1cadeae82a76b136ff36dca51aa87133f2413169e8e42f9551a5982aa865638d0fcd62aacac988bfca1cb273b4fc631f645a017be4242c481f66 SHA512 56e5f098713a53961f0967972197ee5eee51175964a4299c4aa647f66a47abf882304384a5dac51134ab1f806d300c7278c4479912b723f0a7ab5d19b0fe0834
diff --git a/sci-biology/bfast/bfast-0.7.0a.ebuild b/sci-biology/bfast/bfast-0.7.0a.ebuild
deleted file mode 100644
index dd4036c6030e..000000000000
--- a/sci-biology/bfast/bfast-0.7.0a.ebuild
+++ /dev/null
@@ -1,29 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit autotools
-
-DESCRIPTION="Blat-like Fast Accurate Search Tool"
-HOMEPAGE="https://sourceforge.net/projects/bfast/"
-SRC_URI="https://downloads.sourceforge.net/${PN}/${P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="test"
-RESTRICT="test" # tests broken, upstream unresponsive
-
-RDEPEND="dev-perl/XML-Simple"
-
-PATCHES=(
- "${FILESDIR}"/${P}-autotools.patch
- "${FILESDIR}"/${P}-test-sourcing.patch
- "${FILESDIR}"/${P}-C99-inline.patch
-)
-
-src_prepare() {
- default
- eautoreconf
-}