reinit the tree, so we can have metadata

11 files changed, 403 insertions, 0 deletions

diff --git a/sci-biology/treeviewx/Manifest b/sci-biology/treeviewx/Manifest
new file mode 100644
index 000000000000..815385d878f2
--- /dev/null
+++ b/sci-biology/treeviewx/Manifest
@@ -0,0 +1,13 @@
+AUX treeviewx-0.5.1-70_choose_tree.patch 439 SHA256 99733776abfb7fe3db2ac3dcca5051e8f11f216442206cd7f49d4b7e910a584e SHA512 efe6e903929264359388f88288a95ea28d98efe1eb3dca6248801afa0ab44ee7afdf456f271d088f7b3231b1b9db58c5fde7b147c4ca76b5761d77a1139762bc WHIRLPOOL 9cbec22bfd967592808116ea374f7fac42089be17a56307c83e7b5076a9fa90caf1269a2c3356b8176064a50971dfdd61d0620028a16f3d1dcee5b48c0d6c12d
+AUX treeviewx-0.5.1-fix_loading_crash.patch 951 SHA256 13cbf0f6f660fdd54a332aaa13c7ae0f4ee333a8288d98f52ce1a49cf91b2596 SHA512 9c205520dce7851520b24532f88348906c4d5a7f0fe392348099ee9f7377b778792170620856d533a275251a024756482bbd4b83d1da8281b84c39cdf2b3a711 WHIRLPOOL 4b2cd57d9c8f2b88f8075a04e5046865f5bd5a905d5d7c87d6f66dd10efd098926e69af33beea2071129c0fa233dc7477e84aded876beea44e1e7ca798190780
+AUX treeviewx-0.5.1-gcc4.3.patch 2601 SHA256 e2f0a1f1b3c53b61f61e6f8b6d820f37350573ca8ab35866f4cbe96cd654bb6a SHA512 4629ad00ca712163fccbdb029dbb42970d432b2bcaf6b6345a7bf3dca2331ab988742a6dfbc8874e2624988c699b4ba1fff8032dda53afcffbd8264df62b480b WHIRLPOOL 9cdec7b159f536c9599e30a936fcc7c0c51b7e002af851d2e8c734c69a809cf113cb7995c23b8940307ff89f0de205578e53c5266c1c6dd308c189ad14156c1a
+AUX treeviewx-0.5.1-svg.patch 1181 SHA256 3d24052ca5ce8803970a4ea2541fe28238dcc499ea26f3ee32312c11e1508eab SHA512 d71ee136f4f47792ce98826d8f7bca18320f404937abd90cdacd2685f62ed28f48601a105dd1cfb9717891a8930be339b6a663b11784f305d03af0cba24b4c4f WHIRLPOOL 209d73dec82da1bb9241c343569c008009eed4fb1dfb1f51cdc3947b172f630c3e032698ef632242bd5589ab9424aec18d46251fb8e718200f3491e10f92d3dc
+AUX treeviewx-0.5.1-treeview-xpm-not-xbm.patch 519 SHA256 1b7c1843f0fed0873198f4e0222eea54f7f98107424b6765bac01a2557207b81 SHA512 324b77dc43a99b55be45e1b561e528c8bb2f56ec4b1c7162987c848d0e6ea034efe262d910ee67fddcf0137b6eaeedfb50f26b8b2106b0459582942f5eccfbd4 WHIRLPOOL fc04a7caadea14ed129cb1d413947b19e9e669d68d33b80eee537694e4a740a2368e78e24c69e00ef4bbb0c0ab7954b7ff2314835fa9d83e8cff355ac4aacc77
+AUX treeviewx-0.5.1-wx30.patch 2211 SHA256 559153b17842ae169a7b4bc1e40b65c47a08be2b4606ba4643f52604480dcdd1 SHA512 0f1c05495badabba586d88a6fd0e3610b28dc5779c036d3da4956de6c5e02aabf1ef59e9aceffe85cc78ea582329965f6e228774ad6a944d91542e8bacb5daa6 WHIRLPOOL f38a42df082e385acb6be82515994e3a2665578f5b48d61c6ec826746ba24d33357f389c20793efc4ec5fa117cd5b4f140180ac8203d55593972d7d2899b90e7
+AUX treeviewx-0.5.1-wxstring-maxlen.patch 1438 SHA256 09ed71b70f84b2fbc484651d7ea7d1dcfe3c25b379d849f050d6cb42005afb0f SHA512 6e02ac59e8a28da8e94d5d6fdea71b3db9bc4501d9becf2d7aa6472d3f9f9b571fe68730390fd4cf6e1e422d618c21c40d86442d6b710e8395db107fc3445392 WHIRLPOOL 5fb9a8ef3467a3ae0d7efc8a75672326734d9cf7bcbc0198a79e126c4875390730cfeeefcdd71a8d1b8e28be581efd98976134d466da7ee1071806a158dc37eb
+AUX treeviewx-wxt.patch 1854 SHA256 2881ec0a4644434320d284a4024f18cba765245de99fa7b50c3cc20ab7a37eb4 SHA512 35f9682bd8f17a2d2436ae6c0b729bcb766fd848b9b24e3f17577e4cef0cd6fd820a8686818feaf6e1414c0f10891bac0befa818a9befc337fd5e87f5120e520 WHIRLPOOL 6f91bd5ebdff8c4c32ff727bf57f2cc122d0034171704650e7263bc7da6cae798b1e4f023526063ecad01f6e69b9e995cdcbfea1478130c086909d2593fcc9e9
+DIST tv-0.5.1.tar.gz 426745 SHA256 118bdbefb3f21636b1ba9da92e1b2029cb4d7d9944f4d02d2deace4ebb14c2d1 SHA512 45a7ac6dff5b22771e4428d6b1ee528c0039956a462658d28d4f588b6df32620d8f69b3bcf5ca23643e2bdd5361da00625fcb1495bcf4f74d44ee22022c63143 WHIRLPOOL 4f115c3a0e4d6ea6205eb4be76413965ed64a1562d8d9a53207cb64e2dce4caff57c430960b402228e1d6515c9797e69162594021c1cdee09028e671a3247c06
+EBUILD treeviewx-0.5.1-r3.ebuild 894 SHA256 06b570db06a8106db648a65e03de33c502e0666e58f798698637b1c358ecdcbf SHA512 316d9b8359813322cf77338aae8b7f687d4a40ca52cd70d739fbf76b28a188e45ac97d430b90fdec2b2c0e081de868cc3c842d0a94a56c8f3d0124eac058ffa9 WHIRLPOOL a7bb76e0a132592c3a5ce839803fc86e856bfa4097824617eeb6a42d44d520e47c937b4f2e3de39bdffb4daacb834e2d068b7695d6e193a3d592cbaec52bf745
+MISC ChangeLog 3679 SHA256 9a41d4a1f29f027e0b40043eef1fbab39342203e4da1c6cf70726b3a8a051aa6 SHA512 a727d6a1cc706c0f2d495a2c075d4e6a45df6565416d4cc96b734efcd5e8460627aeb97f77dfe53bc328f007cf59cd128fbe820f88d21e02e779aa45bd400b87 WHIRLPOOL b775f5acd10f5348c0b2c1d273b14c8ef478fe40029203a90e43edf0d22c8eb4bd7ce7eeaf481e91238fbf4513e198e0973190a45e8639c5e06361f5e9b69ea3
+MISC ChangeLog-2015 4158 SHA256 d48f59524159b132f37532f48ea6693065ad47173a85d21c8e000fecb1b02e79 SHA512 e17aaa41a46878fb7f267886c2121f5383daa3394be6a2b54b923c0885ec88a2053d7d9597fff543122bc6fb6c0da090091c84089d4afd0c20cc97e2d3653133 WHIRLPOOL 558942e59a9dabd02adf98f67a64ae64ff2ddd533301de8162ef4f92f0c03d04f0b171d7603ce6090fbfa5accefff374a68db20c69912c823ed03494daf45a9a
+MISC metadata.xml 530 SHA256 b96f2ad648a5f6a4d238d759221c8340475acc74b367661f80e9fd59b725b482 SHA512 28c429150fb8df5db3205b352f077fe431f3e2ca530195468a340909a3b37882fae67e05452a7810ac34ffb8a02979625b48c28285a7d3abf31004238fce1463 WHIRLPOOL cb576bf37639acbedd4cf7b5bc4ee633e2da958d1a13c674cd29029b5352570791daf3faab3ba010df95499daca19d788d66ce3e621e2ed760ed5ab90b3133bd
diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-70_choose_tree.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-70_choose_tree.patch
new file mode 100644
index 000000000000..ed5aa43e23c3
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-70_choose_tree.patch
@@ -0,0 +1,12 @@
+## 70_choose_tree.dpatch by William Alexander Grant <william.grant@ubuntu.com.au>
+--- tv-0.5.orig/tview.cpp
++++ tv-0.5/tview.cpp
+@@ -209,7 +209,7 @@
+         wxT("SVG vector picture files (*.svg)|*.svg"),
+         wxSAVE|wxOVERWRITE_PROMPT);
+ 
+-    if (dialog.ShowModal() == wxID_OK)
++    if ((dialog.ShowModal() == wxID_OK) && (p.GetNumTrees() != 0))
+     {
+ 		wxSVGFileDC pictureDC (dialog.GetPath(), 600, 650) ;
+ 		OnDraw (&pictureDC);
diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-fix_loading_crash.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-fix_loading_crash.patch
new file mode 100644
index 000000000000..c136539726a3
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-fix_loading_crash.patch
@@ -0,0 +1,40 @@
+Bug: http://code.google.com/p/treeviewx/issues/detail?id=1
+Description: fix crash on loading tree file.
+Author: Tim Booth
+--- tv-0.5.orig/tview.cpp
++++ tv-0.5/tview.cpp
+@@ -278,7 +278,7 @@
+ 			char buf[256];
+ 			strcpy (buf, p->GetLabel().c_str());
+ 			wchar_t wbuf[256];
+-			mbstowcs (wbuf, buf, size_t(wbuf));
++			mbstowcs (wbuf, buf, 256);
+ 			s << wbuf;
+ #else
+    			s << p->GetLabel().c_str();
+@@ -563,7 +563,7 @@
+ 		char buf[256];
+ 		strcpy (buf, t.GetName().c_str());
+ 		wchar_t wbuf[256];
+-		mbstowcs (wbuf, buf, size_t(wbuf));
++		mbstowcs (wbuf, buf, 256);
+ 		txt << wbuf;
+ #else
+ 		txt << t.GetName().c_str();
+@@ -712,7 +712,7 @@
+ 		char buf[256];
+ 		strcpy (buf, p.GetIthTreeName(i).c_str());
+ 		wchar_t wbuf[256];
+-		mbstowcs (wbuf, buf, size_t(wbuf));
++		mbstowcs (wbuf, buf, 256);
+ 
+ 		std::wstring tname = wbuf;
+ 
+@@ -1046,6 +1046,7 @@
+ void MyCanvas::OnSize(wxSizeEvent& event)
+ {
+ 	Resize ();
++    Refresh();
+     event.Skip();
+ }
+ 
diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-gcc4.3.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-gcc4.3.patch
new file mode 100644
index 000000000000..33bd3b1741f6
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-gcc4.3.patch
@@ -0,0 +1,77 @@
+diff -Naur tv-0.5.1/TreeLib/Parse.cpp tv-0.5.1.new/TreeLib/Parse.cpp
+--- tv-0.5.1/TreeLib/Parse.cpp	2002-02-23 07:22:32.000000000 -0500
++++ tv-0.5.1.new/TreeLib/Parse.cpp	2008-06-17 06:08:24.000000000 -0400
+@@ -24,6 +24,11 @@
+ #include <ctype.h>
+ #include "Parse.h"
+ 
++
++
++
++#include <cstring>
++
+ // Return the next token in the string
+ tokentype Parser::NextToken ()
+ {
+diff -Naur tv-0.5.1/TreeLib/TreeLib.cpp tv-0.5.1.new/TreeLib/TreeLib.cpp
+--- tv-0.5.1/TreeLib/TreeLib.cpp	2004-05-13 08:22:11.000000000 -0400
++++ tv-0.5.1.new/TreeLib/TreeLib.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -24,6 +24,8 @@
+ #include "TreeLib.h"
+ #include "Parse.h"
+ 
++
++#include <cstdlib>
+ #include <vector>
+ 
+ 
+diff -Naur tv-0.5.1/TreeLib/treereader.cpp tv-0.5.1.new/TreeLib/treereader.cpp
+--- tv-0.5.1/TreeLib/treereader.cpp	2003-09-10 08:58:16.000000000 -0400
++++ tv-0.5.1.new/TreeLib/treereader.cpp	2008-06-17 06:07:15.000000000 -0400
+@@ -28,6 +28,9 @@
+ 	#include <stdlib.h>
+ #endif
+ 
++#include <cstring>
++#include <cstdlib>
++
+ //------------------------------------------------------------------------------
+ TreeReader::TreeReader (Tokeniser &p) : parser (p)
+ {
+diff -Naur tv-0.5.1/ncl-2.0/src/charactersblock.cpp tv-0.5.1.new/ncl-2.0/src/charactersblock.cpp
+--- tv-0.5.1/ncl-2.0/src/charactersblock.cpp	2002-12-10 06:35:49.000000000 -0500
++++ tv-0.5.1.new/ncl-2.0/src/charactersblock.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,5 @@
++
++#include <cstring>
+ #include "nexusdefs.h"
+ #include "xnexus.h"
+ #include "nexustoken.h"
+diff -Naur tv-0.5.1/ncl-2.0/src/nexus.cpp tv-0.5.1.new/ncl-2.0/src/nexus.cpp
+--- tv-0.5.1/ncl-2.0/src/nexus.cpp	2002-12-10 06:35:50.000000000 -0500
++++ tv-0.5.1.new/ncl-2.0/src/nexus.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,5 @@
++
++#include <cstring>
+ #include "nexusdefs.h"
+ #include "xnexus.h"
+ #include "nexustoken.h"
+diff -Naur tv-0.5.1/ncl-2.0/src/nexustoken.cpp tv-0.5.1.new/ncl-2.0/src/nexustoken.cpp
+--- tv-0.5.1/ncl-2.0/src/nexustoken.cpp	2005-04-29 10:28:17.000000000 -0400
++++ tv-0.5.1.new/ncl-2.0/src/nexustoken.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,5 @@
++
++#include <cstring>
+ #include "nexusdefs.h"
+ #include "xnexus.h"
+ #include "nexustoken.h"
+diff -Naur tv-0.5.1/ncl-2.0/src/nxsstring.cpp tv-0.5.1.new/ncl-2.0/src/nxsstring.cpp
+--- tv-0.5.1/ncl-2.0/src/nxsstring.cpp	2001-02-02 07:55:40.000000000 -0500
++++ tv-0.5.1.new/ncl-2.0/src/nxsstring.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,6 @@
++
++#include <cstring>
++
+ #ifdef __BORLANDC__
+ 	// Undefine __MINMAX_DEFINED so that min and max are correctly defined
+ 	#ifdef __MINMAX_DEFINED
diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-svg.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-svg.patch
new file mode 100644
index 000000000000..67a62179bb87
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-svg.patch
@@ -0,0 +1,30 @@
+Author: Olly Betts <olly@survex.com>
+Description: Update configure.in to match what it must have said when configure was generated.
+ One thing I should probably explain about the patch as my change may
+ seem odd otherwise - upstream's configure.in says "USE_SVG=0" but the
+ generated configure says "USE_SVG=1", so I've simply updated
+ configure.in to match what it must have said when configure was
+ generated.
+Forwarded: no
+--- tv-0.5.orig/configure.in
++++ tv-0.5/configure.in
+@@ -66,7 +66,9 @@
+   case "$wx_version" in
+      2.4.*) WX_SVG_LIB=[`$WX_CONFIG --basename`_dcsvg-`echo ${wx_version} | sed -e "s:\.[0-9]\{1,\}$::"`]
+            ;;
+-     *)    WX_SVG_LIB=[`$WX_CONFIG --basename`_svg-`echo ${wx_version} | sed -e "s:\.[0-9]\{1,\}$::"`]
++     2.*)   WX_SVG_LIB=[`$WX_CONFIG --basename`_svg-`echo ${wx_version} | sed -e "s:\.[0-9]\{1,\}$::"`]
++           ;;
++     *)     WX_SVG_LIB=
+            ;;
+   esac
+ 
+@@ -76,7 +78,7 @@
+ 
+ if test "$USE_SVG" = 1 ; then
+    CXXFLAGS="$CXXFLAGS -DUSE_SVG"
+-   LIBS="$LIBS -l$WX_SVG_LIB"
++   test -n "$WX_SVG_LIB" && LIBS="$LIBS -l$WX_SVG_LIB"
+ fi
+ 
+ AC_OUTPUT(Makefile ncl-2.0/Makefile ncl-2.0/src/Makefile TreeLib/Makefile tv.spec)
diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-treeview-xpm-not-xbm.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-treeview-xpm-not-xbm.patch
new file mode 100644
index 000000000000..a57ae19aaf26
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-treeview-xpm-not-xbm.patch
@@ -0,0 +1,16 @@
+Description: Fix the extension of the icon
+Author: Olly Betts <olly@survex.com>
+Last-Update: 2014-06-21
+Forwarded: http://code.google.com/p/treeviewx/issues/detail?id=4
+
+--- tv-0.5.orig/tv.cpp
++++ tv-0.5/tv.cpp
+@@ -215,7 +215,7 @@
+ 	frame->SetIcon(wxIcon("app")); // use the name of the icon in the resource file
+ #endif
+ #if defined(__WXGTK__) || defined(__WXMOTIF__)
+-	frame->SetIcon(wxIcon(wxT("bitmaps/treeview.xbm")));
++	frame->SetIcon(wxIcon(wxT("/usr/share/pixmaps/treeviewx.xpm")));
+ #endif
+ 
+ #ifdef __WXMAC__
diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-wx30.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-wx30.patch
new file mode 100644
index 000000000000..b1db5749990c
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-wx30.patch
@@ -0,0 +1,78 @@
+ tv.cpp    |  4 ++--
+ tview.cpp | 12 ++++++++----
+ 2 files changed, 10 insertions(+), 6 deletions(-)
+
+diff --git a/tv.cpp b/tv.cpp
+old mode 100755
+new mode 100644
+index 1abe90b..0df45a8
+--- a/tv.cpp
++++ b/tv.cpp
+@@ -163,9 +163,9 @@ bool MyApp::OnInit(void)
+ {
+ 	// Optional command line argument is name of file to open
+ #if wxUSE_UNICODE
+-	wchar_t *InputFile = NULL;
++	const wchar_t *InputFile = NULL;
+ #else
+-	char *InputFile = NULL;
++	const char *InputFile = NULL;
+ #endif
+ 	// Read input/output files
+ 	if (argc > 1)
+diff --git a/tview.cpp b/tview.cpp
+old mode 100755
+new mode 100644
+index 93972c3..4b2d593
+--- a/tview.cpp
++++ b/tview.cpp
+@@ -62,9 +62,13 @@
+ #ifdef __WXMSW__
+ #else
+ #ifdef USE_SVG
++#if wxMAJOR_VERSION >= 3
++	#include <wx/dcsvg.h>
++#else
+ 	#include <wx/svg/dcsvg.h>
+ #endif
+ #endif
++#endif
+ 
+ // GUI interface
+ #include "tv.h"
+@@ -186,7 +190,7 @@ void TView::OnSavePicture (wxCommandEvent& WXUNUSED(event))
+ 	wxFrame *f = GetMainFrame();
+ 	wxFileDialog dialog((wxWindow *)f, wxT("Save Picture as"), wxT(""),
+ 		pictureFileName, wxT("Enhanced metafile (*.emf)|*.emf"),
+-		wxSAVE|wxOVERWRITE_PROMPT);
++		wxFD_SAVE|wxFD_OVERWRITE_PROMPT);
+ 
+     if (dialog.ShowModal() == wxID_OK)
+     {
+@@ -206,7 +210,7 @@ void TView::OnSavePicture (wxCommandEvent& WXUNUSED(event))
+ 	#endif 
+ 	wxFileDialog dialog((wxWindow *)f, wxT("Save Picture as"), wxT(""),
+ 		pictureFileName, wxT("SVG vector picture files (*.svg)|*.svg"),
+-		wxSAVE|wxOVERWRITE_PROMPT);
++		wxFD_SAVE|wxFD_OVERWRITE_PROMPT);
+ 
+     if (dialog.ShowModal() == wxID_OK)
+     {
+@@ -361,7 +365,7 @@ bool TView::OnClose(bool deleteWindow)
+ 
+ 	// Clear the canvas in  case we're in single-window mode,
+ 	// and the canvas stays.
+-#if (wxMINOR_VERSION > 4) // from 2.5 Clear is deprecated
++#if (wxMAJOR_VERSION >= 3 || wxMINOR_VERSION > 4) // from 2.5 Clear is deprecated
+ 	canvas->ClearBackground();
+ #else
+ 	canvas->Clear();
+@@ -686,7 +690,7 @@ void TView::OnLeafFont (wxCommandEvent& WXUNUSED(event))
+ 	wxFontData data;
+ 	data.SetInitialFont (LeafFont);
+ 
+-#ifdef __WXMAC__
++#if wxMAJOR_VERSION >= 3 || defined __WXMAC__
+ 	wxFontDialog dialog((wxWindow *)GetFrame(), data);
+ #else
+ 	wxFontDialog dialog((wxWindow *)GetMainFrame(), &data);
diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-wxstring-maxlen.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-wxstring-maxlen.patch
new file mode 100644
index 000000000000..2c5179f778ca
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-wxstring-maxlen.patch
@@ -0,0 +1,34 @@
+Description: Remove wxSTRING_MAXLEN (removed in wx3.0) and incomp. definition.
+ The definition wxSTRING_MAXLEN was removed from the public API of wxWidgets.
+ Its meaning was basically "take all the string", whenever a string length was
+ expected. The missing definition didn't raise a compilation error because
+ TreeLib's treedrawer.h contained a fall-back definition, which is however
+ incompatible with the original definition of wxWidgets and therefore is
+ interpreted by wxWidgets as a number representing the real string length.
+ This patch gets rid of the dangerous fall-back definition and of all of its
+ uses by using alternative wxString constructors that achieve the same
+ behavior.
+Author: Martin Steghöfer <martin@steghoefer.eu>
+Last-Update: Sun, 10 Aug 2014 14:06:42 +0200
+Bug-Debian: http://bugs.debian.org/751255
+
+--- tv-0.5.orig/TreeLib/treedrawer.cpp
++++ tv-0.5/TreeLib/treedrawer.cpp
+@@ -245,7 +245,7 @@
+ 	// error in gcc, which is probably a gcc bug
+ 	{
+ 		wxCoord w, h, descent;
+-		wxString s (formatedString.c_str(), wxSTRING_MAXLEN);
++		wxString s (formatedString.c_str());
+ 		pt.x += dc->GetCharWidth();
+ 		pt.y -= dc->GetCharHeight()/2;
+ 		dc->DrawText (s, (int)pt.x, (int)pt.y);
+@@ -566,7 +566,7 @@
+ 
+ #if USE_WXWINDOWS
+         wxCoord w, h;
+-        wxString s (buf, wxSTRING_MAXLEN);
++        wxString s (buf);
+         dc->GetTextExtent (s, &w, &h);
+         int x = (int)pt2.x;
+         int y = (int)pt2.y;
diff --git a/sci-biology/treeviewx/files/treeviewx-wxt.patch b/sci-biology/treeviewx/files/treeviewx-wxt.patch
new file mode 100644
index 000000000000..b1c03bbb39f9
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-wxt.patch
@@ -0,0 +1,50 @@
+--- tv.cpp~	2005-10-01 16:47:35.000000000 -0400
++++ tv.cpp	2005-10-01 16:52:30.000000000 -0400
+@@ -312,11 +312,15 @@
+ 	{
+ #ifdef __WXMSW__
+ 		file_menu->AppendSeparator();
+-		file_menu->Append(SAVEAS_PICTURE_CMD, "Save As Picture..."), wxT("Save picture of tree to metafile");
++		file_menu->Append(SAVEAS_PICTURE_CMD,
++			wxT("Save As Picture...")),
++			wxT("Save picture of tree to metafile");
+ #else
+ 	#ifdef USE_SVG
+ 		file_menu->AppendSeparator();
+-		file_menu->Append(SAVEAS_PICTURE_CMD, "Save As Picture..."), wxT("Save picture of tree to SVG file");
++		file_menu->Append(SAVEAS_PICTURE_CMD,
++			wxT("Save As Picture...")),
++			wxT("Save picture of tree to SVG file");
+ 	#endif
+ #endif
+ 		file_menu->AppendSeparator();
+--- tview.cpp~	2005-10-01 16:47:45.000000000 -0400
++++ tview.cpp	2005-10-01 16:50:42.000000000 -0400
+@@ -184,10 +184,10 @@
+ 	wxString pictureFileName = GetFrame()->GetTitle();
+ 	pictureFileName += wxT(".emf");
+ 	wxFrame *f = GetMainFrame();
+-   	wxFileDialog dialog((wxWindow *)f, "Save Picture as", "", pictureFileName,
+-        "Enhanced metafile (*.emf)|*.emf",
+-        wxSAVE|wxOVERWRITE_PROMPT);
+-    
++	wxFileDialog dialog((wxWindow *)f, wxT("Save Picture as"), wxT(""),
++		pictureFileName, wxT("Enhanced metafile (*.emf)|*.emf"),
++		wxSAVE|wxOVERWRITE_PROMPT);
++
+     if (dialog.ShowModal() == wxID_OK)
+     {
+ 		wxMetafileDC pictureDC (dialog.GetPath(), 600, 650) ;
+@@ -204,9 +204,9 @@
+ 	#else
+ 	wxFrame *f = GetMainFrame();
+ 	#endif 
+-    wxFileDialog dialog((wxWindow *)f, "Save Picture as", "", pictureFileName,
+-        "SVG vector picture files (*.svg)|*.svg",
+-        wxSAVE|wxOVERWRITE_PROMPT);
++	wxFileDialog dialog((wxWindow *)f, wxT("Save Picture as"), wxT(""),
++		pictureFileName, wxT("SVG vector picture files (*.svg)|*.svg"),
++		wxSAVE|wxOVERWRITE_PROMPT);
+ 
+     if (dialog.ShowModal() == wxID_OK)
+     {
diff --git a/sci-biology/treeviewx/metadata.xml b/sci-biology/treeviewx/metadata.xml
new file mode 100644
index 000000000000..8683bbc5f8f7
--- /dev/null
+++ b/sci-biology/treeviewx/metadata.xml
@@ -0,0 +1,14 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer type="project">
+		<email>sci-biology@gentoo.org</email>
+		<name>Gentoo Biology Project</name>
+	</maintainer>
+	<longdescription>
+		TreeView X is a program for displaying phylogenetic trees on Linux and
+		UNIX platforms. It can read and display NEXUS and Newick format tree
+		files (such as those output by PAUP*, ClustalX, TREE-PUZZLE, and other
+		programs).
+	</longdescription>
+</pkgmetadata>
diff --git a/sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild b/sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild
new file mode 100644
index 000000000000..7d1fe1c773e0
--- /dev/null
+++ b/sci-biology/treeviewx/treeviewx-0.5.1-r3.ebuild
@@ -0,0 +1,39 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=5
+
+WX_GTK_VER=3.0
+
+inherit autotools eutils wxwidgets
+
+DESCRIPTION="A phylogenetic tree viewer"
+HOMEPAGE="http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/"
+SRC_URI="http://darwin.zoology.gla.ac.uk/~rpage/${PN}/download/0.5/tv-${PV}.tar.gz"
+LICENSE="GPL-2"
+
+KEYWORDS="amd64 x86"
+SLOT="0"
+IUSE=""
+
+DEPEND="x11-libs/wxGTK:${WX_GTK_VER}[X]"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/tv-${PV}"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-wxt.patch
+	"${FILESDIR}"/${P}-gcc4.3.patch
+	"${FILESDIR}"/${P}-70_choose_tree.patch
+	"${FILESDIR}"/${P}-fix_loading_crash.patch
+	"${FILESDIR}"/${P}-wx30.patch
+	"${FILESDIR}"/${P}-svg.patch
+	"${FILESDIR}"/${P}-treeview-xpm-not-xbm.patch
+	"${FILESDIR}"/${P}-wxstring-maxlen.patch
+	)
+
+src_prepare() {
+	epatch "${PATCHES[@]}"
+	mv configure.{in,ac} || die
+	eautoreconf
+}