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authorV3n3RiX <venerix@redcorelinux.org>2020-09-30 17:27:54 +0100
committerV3n3RiX <venerix@redcorelinux.org>2020-09-30 17:27:54 +0100
commitf70a1bfc721336d4fc7dfb711c2f518a6b18cf16 (patch)
treee907cb121b30e3c1df1710719c0ddf4029597a47 /sci-biology/seaview
parentdb063b515939ab15261136b24e4bc44386335c0c (diff)
gentoo resync : 30.09.2020
Diffstat (limited to 'sci-biology/seaview')
-rw-r--r--sci-biology/seaview/Manifest2
-rw-r--r--sci-biology/seaview/seaview-4.3.5.ebuild76
2 files changed, 0 insertions, 78 deletions
diff --git a/sci-biology/seaview/Manifest b/sci-biology/seaview/Manifest
index 97b3063f1c7c..370ccb30d448 100644
--- a/sci-biology/seaview/Manifest
+++ b/sci-biology/seaview/Manifest
@@ -1,7 +1,5 @@
-DIST seaview_4.3.5.tar.gz 309530 BLAKE2B a4210b179bba5ab40215603738fe844d48b4f953e7b79749786afcedce0625f17c343a2d4ed2a45d4a7cfc2d4c9abbb7ab856e98405694160ecfac186f86fadd SHA512 b20c018da9a29d79fe0393fed5d29117729492ea8f36e72d4aeb98044a3de4a13331bd29e76ca552a08f6da764e57e69f9fb0325fc031551514d7a54b56c849a
DIST seaview_4.5.4.tar.gz 420608 BLAKE2B 14b044706440da88987cd6b546595497f2de61e8d03615bfce4634104914a56544a464b0abedc83e6c96329697dccb2087c2b1af5a1fdbf0d9bdc26418a49a75 SHA512 a8a2e49a13f87ae4279311068147169b1e17874e9ce5787003b854c7271efc7a128db6916bb883a9b7b0b90f855fe40d83c77e9fd9f5751464e04346b9923301
DIST seaview_4.6.tar.gz 424258 BLAKE2B e958ff4b1f6bb283a2122d65917a352914f33e5c9593c34c449800fbcac74b0dd4fa98bb1f47c45e11f24e07dfebb3ced54fbd8440b2bcd2b1df32dc398d5892 SHA512 e005d9dcc9e03c5636404e94f0059f7d4a9289fe77ecdab765e3ca2b59d826b8711a344f3824d079383a7ede0fe17b3b06694dfb7b709bb6a0a1e38cef6ee1d6
-EBUILD seaview-4.3.5.ebuild 2013 BLAKE2B 91c192d7cb22411f7af4366088c1e47c657fc75855cab2a289d4a1d7cec206302b2670612117334d6c6b79d25c578daf3da5cbd053dc98602ead9033c3b90f35 SHA512 41eeabeb570a22219f7ad649a4eb127b94a253f914ea6637fcce518da3607e3fb42b528d3aa436f6b86e54b695d31900b29558ec0696c1e4bf3264c42cdfc945
EBUILD seaview-4.5.4.ebuild 2013 BLAKE2B 91c192d7cb22411f7af4366088c1e47c657fc75855cab2a289d4a1d7cec206302b2670612117334d6c6b79d25c578daf3da5cbd053dc98602ead9033c3b90f35 SHA512 41eeabeb570a22219f7ad649a4eb127b94a253f914ea6637fcce518da3607e3fb42b528d3aa436f6b86e54b695d31900b29558ec0696c1e4bf3264c42cdfc945
EBUILD seaview-4.6.ebuild 1997 BLAKE2B 1c7c01e0a52f943b9506954d84519c8ff09b15d307476aa659f7bb49af9de1ea02076bb74bcebaac49a571d18624455879c321faa7458f8ac2660773eb4b8706 SHA512 5768df52c205ccfaa4d2d52ec753125dd77eb91a7b0be959dbc67aca00c0a66dc3f13b125d073450a81a06eea29880503981942042c77a0c6e1bb8f19f070cb8
MISC metadata.xml 621 BLAKE2B 9c56cc2099ed696942e2958926ee8c9f24be26fd273e74a7f789d368c3a222f084363ec3a4eada5e1197c4a81f533074f4b05c43d1e9c951e66261d55bc4d9e8 SHA512 7c49694ef56359e58b76b0dd7715d28615a541655c6ccaa2d7d64041c7340082bd5026fa2baa5a15e51e3aa27309d5a72ab836a5ee554366eb324406a50a09c4
diff --git a/sci-biology/seaview/seaview-4.3.5.ebuild b/sci-biology/seaview/seaview-4.3.5.ebuild
deleted file mode 100644
index 33ee6f65ccbd..000000000000
--- a/sci-biology/seaview/seaview-4.3.5.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils multilib toolchain-funcs
-
-DESCRIPTION="A graphical multiple sequence alignment editor"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
-SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/${PN}_${PV}.tar.gz"
-
-LICENSE="public-domain"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="+xft"
-
-CDEPEND="
- sys-libs/zlib
- x11-libs/fltk:1
- x11-libs/libX11
- xft? (
- x11-libs/libXft
- x11-libs/fltk:1[xft] )"
-RDEPEND="${CDEPEND}
- sci-biology/clustalw
- || ( sci-libs/libmuscle sci-biology/muscle )
- sci-biology/phyml"
-DEPEND="${CDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}/${PN}"
-
-src_prepare() {
- # respect CXXFLAGS (package uses them as CFLAGS)
- sed \
- -e "s:^CC.*:CC = $(tc-getCC):" \
- -e "s:^CXX.*:CXX = $(tc-getCXX):" \
- -e "s:\$(OPT):${CXXFLAGS}:" \
- -e "s:^OPT:#OPT:" \
- -e "s:^FLTK = .*$:FLTK = ${EPREFIX}/usr/include/fltk-1:" \
- -e "s:^#IFLTK .*:IFLTK = $(fltk-config --use-images --cflags):" \
- -e "s:^#LFLTK .*:LFLTK = $(fltk-config --use-images --ldflags):" \
- -e "s:^USE_XFT:#USE_XFT:" \
- -e "s:^#HELPFILE:HELPFILE:" \
- -e "s:/usr/share/doc/seaview/seaview.htm:${EPREFIX}/usr/share/seaview/seaview.htm:" \
- -e "s:^#PHYMLNAME:PHYMLNAME:" \
- -e 's:-lXinerama::g' \
- -e 's:-lpng::g' \
- -e 's:-ljpeg::g' \
- -e 's:-lfontconfig::g' \
- -i Makefile || die "sed failed while editing Makefile"
-
- if use xft; then
- sed \
- -e "s:^#USE_XFT .*:USE_XFT = -DUSE_XFT $($(tc-getPKG_CONFIG) --cflags xft):" \
- -e "s:-lXft:$($(tc-getPKG_CONFIG) --libs xft):" \
- -i Makefile || die "sed failed while editing Makefile to enable xft"
- else
- sed -i -e "s:-lXft::" Makefile || die
- fi
-}
-
-src_install() {
- dobin seaview
-
- # /usr/share/seaview/seaview.html is hardcoded in the binary, see Makefile
- insinto /usr/share/seaview
- doins example.nxs seaview.html
-
- insinto /usr/share/seaview/images
- doins seaview.xpm
-
- make_desktop_entry seaview Seaview
-
- doman seaview.1
-}