diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
| commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
| tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-biology/psipred/files/3.1-path.patch | |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-biology/psipred/files/3.1-path.patch')
| -rw-r--r-- | sci-biology/psipred/files/3.1-path.patch | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/sci-biology/psipred/files/3.1-path.patch b/sci-biology/psipred/files/3.1-path.patch new file mode 100644 index 000000000000..564e9c8a1ef9 --- /dev/null +++ b/sci-biology/psipred/files/3.1-path.patch @@ -0,0 +1,38 @@ +diff --git a/runpsipred b/runpsipred +index 4ccf44e..34dee99 100755 +--- a/runpsipred ++++ b/runpsipred +@@ -14,13 +14,13 @@ + set dbname = uniref90filt + + # Where the NCBI programs have been installed +-set ncbidir = /usr/local/bin ++set ncbidir = @GENTOO_PORTAGE_EPREFIX@/usr/bin + + # Where the PSIPRED V2 programs have been installed +-set execdir = ./bin ++set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin + + # Where the PSIPRED V2 data files have been installed +-set datadir = ./data ++set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data + + set basename = $1:r + set rootname = $basename:t +diff --git a/runpsipred_single b/runpsipred_single +index 1f7680b..7bd5bc3 100755 +--- a/runpsipred_single ++++ b/runpsipred_single +@@ -10,10 +10,10 @@ + # NOTE: Script modified to be more cluster friendly (DTJ April 2008) + + # Where the PSIPRED V3 programs have been installed +-set execdir = ./bin ++set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin + + # Where the PSIPRED V3 data files have been installed +-set datadir = ./data ++set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data + + set basename = $1:r + set rootname = $basename:t |