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authorV3n3RiX <venerix@redcorelinux.org>2021-04-28 20:21:43 +0100
committerV3n3RiX <venerix@redcorelinux.org>2021-04-28 20:21:43 +0100
commit40aaaa64e86ba6710bbeb31c4615a6ce80e75e11 (patch)
tree758c221bad35c9288d0bd6df9c7dfc226728e52c /sci-biology/probcons
parent8d5dbd847cbc704a6a06405856e94b461011afe3 (diff)
gentoo resync : 28.04.2021
Diffstat (limited to 'sci-biology/probcons')
-rw-r--r--sci-biology/probcons/Manifest2
-rw-r--r--sci-biology/probcons/probcons-1.12-r1.ebuild22
2 files changed, 10 insertions, 14 deletions
diff --git a/sci-biology/probcons/Manifest b/sci-biology/probcons/Manifest
index 8b648a04fa39..0e374b576c6c 100644
--- a/sci-biology/probcons/Manifest
+++ b/sci-biology/probcons/Manifest
@@ -2,5 +2,5 @@ AUX gcc-4.3.patch 1300 BLAKE2B fd74d2cb3311ef89cb012276a55025e4430b452cd603d2386
AUX probcons-1.12-cxxflags.patch 1957 BLAKE2B 5308ee19d8bec42bc23ba8bf6ee38b4d559be0bbffdae032138f32a5890e6524d3025124f48188f4b580035b398e4957ba246a9305d05577b58909259a73f396 SHA512 033e92e414d3e2d1db867aec980d82759a662cf46692e3cc908bb7b3428d5eca105fb81cbdd8764c54dd3d759d29e713ef085fc48aac183426d26fe68a48a38e
AUX probcons-1.12-gcc-4.6.patch 306 BLAKE2B 0b0dcba7749192be0361fcf2a0778e8a4ef168a1d867e9d1ccaa097fb75c8b580a255dacf25d1312e648bb623e5796370d695afd742304a06e2d18547ceac4c4 SHA512 f8a393cce2a860ea54aa18add7ba236aa43e21893925e4484b272190e29aa2dc27bf20b11edc5694446f027c6d8d6ff3c3f92383f0b0c8958b1b1d5b7564f828
DIST probcons_v1_12.tar.gz 43200 BLAKE2B db59a4472e5ea4ce1801ca74807aa1b1bdb2861a9e52f9b3a4297b37d048ecd6e34298cfd181523093f8fb1cd9a81285e58098bcdec6ffa32caa9cc1117b8b8f SHA512 ce061ea5cca4204d6e66beb893c1ba508f094b7ea3ee08196dc75a5443ebd0afca14dc8d7cd6c8da4ce1578b8750ea1981e5815408c0b122e8f97ec27b3bf008
-EBUILD probcons-1.12-r1.ebuild 1184 BLAKE2B 9ceede9555c3fd4e978036a8f97ddd16c042d812273dea733b0e6ce1a835c8e309b28061011d8a2df754de50c4588f2965ae3242b950629fc9746674c0718d48 SHA512 da6c987d200faa0aa9a8a243eb8ac9a6ebe7381e9b1488477dbc659106df88aaeca8bb6005c25bbfad0757c5178e15b346a2872562705f76a921cccd68f8a466
+EBUILD probcons-1.12-r1.ebuild 1132 BLAKE2B 1ed9f556e3d393ba41611b505cf6a8d682d747d7f0b93001793989d56c710564c77326cc704a50f80e3c9ca338f529f02bdd56536ef6f2083d51439de792640c SHA512 2a506f516adc4190e74d3d756a5a11779f1d06473e4daf132a34829cc9f07cdafa50bb1d3b908df984037ecef885698734c7c964fcd013b3af29e20e71158618
MISC metadata.xml 267 BLAKE2B 7cf386952842945148119de3263231db4d1046d5f54811f7e303ed8ec4d27cbc1960b99c92daf6f32e5b981c2fb9f50ec666be6193865d6e18541b7427a152a9 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403
diff --git a/sci-biology/probcons/probcons-1.12-r1.ebuild b/sci-biology/probcons/probcons-1.12-r1.ebuild
index 01973b88cab9..15960982abff 100644
--- a/sci-biology/probcons/probcons-1.12-r1.ebuild
+++ b/sci-biology/probcons/probcons-1.12-r1.ebuild
@@ -1,35 +1,31 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=7
-inherit eutils toolchain-funcs
+inherit toolchain-funcs
MY_P="${PN}_v${PV/./_}"
DESCRIPTION="Probabilistic Consistency-based Multiple Alignment of Amino Acid Sequences"
HOMEPAGE="http://probcons.stanford.edu/"
SRC_URI="http://probcons.stanford.edu/${MY_P}.tar.gz"
+S="${WORKDIR}/${PN}"
LICENSE="public-domain"
SLOT="0"
KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE=""
# Gnuplot is explicitly runtime-only, it's run using system()
RDEPEND="
!sci-geosciences/gmt
sci-visualization/gnuplot"
-DEPEND=""
-
-S="${WORKDIR}/${PN}"
-src_prepare() {
- epatch \
- "${FILESDIR}"/${P}-cxxflags.patch \
- "${FILESDIR}"/gcc-4.3.patch \
- "${FILESDIR}"/${P}-gcc-4.6.patch
-}
+PATCHES=(
+ "${FILESDIR}"/${P}-cxxflags.patch
+ "${FILESDIR}"/gcc-4.3.patch
+ "${FILESDIR}"/${P}-gcc-4.6.patch
+)
src_compile() {
emake \