diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2019-12-15 18:09:03 +0000 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2019-12-15 18:09:03 +0000 |
| commit | 7bc9c63c9da678a7e6fceb095d56c634afd22c56 (patch) | |
| tree | 4a67d50a439e9af63947e5f8b6ba3719af98b6c9 /sci-biology/mrbayes | |
| parent | b284a3168fa91a038925d2ecf5e4791011ea5e7d (diff) | |
gentoo resync : 15.12.2019
Diffstat (limited to 'sci-biology/mrbayes')
| -rw-r--r-- | sci-biology/mrbayes/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild | 51 |
2 files changed, 0 insertions, 52 deletions
diff --git a/sci-biology/mrbayes/Manifest b/sci-biology/mrbayes/Manifest index a3a8a77c082f..89c72da46a5b 100644 --- a/sci-biology/mrbayes/Manifest +++ b/sci-biology/mrbayes/Manifest @@ -1,5 +1,4 @@ AUX mb_readline_312.patch 1108 BLAKE2B 4413b4193ee7c0c51a1ad7a422474f137682151f932b28fc6ee98390a228a4e5bbabcf30f3d78fc56a79a665ffc40bf05376fbbf14b68ff43bc10a9001ec8e6e SHA512 0a169b8560853dbff87c983bf8220384dcf22f53106ce5711bf3b1fc76d8a9adbf1860618176dde65a8657abe3ad888521bf5485fc00d4014adf1acb7ba3f114 DIST mrbayes-3.1.2.tar.gz 545968 BLAKE2B f4c5bbdde765fb9e596c17d5fd890b168c22cefb0d24b67c1c68623e1dcfa4df716a896fe120f7a1cac4234125b6ed524973506e47492ba3ec26e389783d618a SHA512 2fb0ee7224cbb69c1acf2ffb0c6c8974f63002cda4f39a626eadf80fad9cfc23861f8c03f5545970f3a81e02093d62b6a0549ab7d7f7080557e91e21b2c3ee14 -EBUILD mrbayes-3.1.2-r1.ebuild 1008 BLAKE2B c0523ef79227c24b5ede39bd9e262710ea7f4a408b20bef20e8f0dca0950b12e7d5171b901743c5a6e1fcec9089ce90c4e8385e1a3192e0fb7ab21195122f631 SHA512 5fcbdd396c7b035ecc0b596a9866fdc3544cf8993fd60efa0a5ab41f7cd4271c437626e3c131d9d07759cecef3cb8700a0b5b761ec87cbcbf12b9d206543f918 EBUILD mrbayes-3.1.2-r2.ebuild 1347 BLAKE2B 6587af6372eff67641954301a26fd6b9bcb9bb5b1ba04fb4217da6a6686e71c166409a514c348c93334a5a191bcfdb96afe915f1edd93e5985380c314dce853c SHA512 c8655ecaf9933a963b072a242e44c156f89c635fae00fa135262911e2588beb623764a92634c27a16dcdac4fb70c16b88a428aa154a56ea816fd9b9ff2418037 MISC metadata.xml 916 BLAKE2B 511d932eff0de935a1c8634cc6398bfe6cceb7f2766534e5486f5ff2aa4c900b8d48d7dabc5cee2506061c36421f0ef336f43b5df5d23a03ab5911a1fef87b1b SHA512 ab6be2e4111088bc13e6da5f65d11437dc05dbcdeab83e5d3899b913ff9ad3dc1f22ec81f2fe73f60bf991d01f0a8691eaa124ba24bd7ebb17d995fdd271bfef diff --git a/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild b/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild deleted file mode 100644 index b67b4b228f9b..000000000000 --- a/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild +++ /dev/null @@ -1,51 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=4 - -inherit eutils toolchain-funcs - -DESCRIPTION="Bayesian Inference of Phylogeny" -HOMEPAGE="http://mrbayes.csit.fsu.edu/" -SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -IUSE="debug mpi readline" -KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris" - -DEPEND=" - sys-libs/ncurses - mpi? ( virtual/mpi ) - readline? ( sys-libs/readline:0 )" -RDEPEND="${DEPEND}" - -src_prepare() { - use readline && epatch "${FILESDIR}"/mb_readline_312.patch - sed -e 's:-ggdb::g' -i Makefile || die -} - -src_compile() { - local myconf mycc - - if use mpi; then - mycc=mpicc - else - mycc=$(tc-getCC) - fi - - use mpi && myconf="MPI=yes" - use readline || myconf="${myconf} USEREADLINE=no" - use debug && myconf="${myconf} DEBUG=yes" - emake \ - OPTFLAGS="${CFLAGS}" \ - LDFLAGS="${LDFLAGS}" \ - CC=${mycc} \ - ${myconf} -} - -src_install() { - dobin mb - insinto /usr/share/${PN} - doins *.nex -} |