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authorV3n3RiX <venerix@koprulu.sector>2022-03-20 00:40:44 +0000
committerV3n3RiX <venerix@koprulu.sector>2022-03-20 00:40:44 +0000
commit4cbcc855382a06088e2f016f62cafdbcb7e40665 (patch)
tree356496503d52354aa6d9f2d36126302fed5f3a73 /sci-biology/fasta/files
parentfcc5224904648a8e6eb528d7603154160a20022f (diff)
gentoo resync : 20.03.2022
Diffstat (limited to 'sci-biology/fasta/files')
-rw-r--r--sci-biology/fasta/files/fasta-36.3.8h-ldflags.patch (renamed from sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch)23
1 files changed, 6 insertions, 17 deletions
diff --git a/sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch b/sci-biology/fasta/files/fasta-36.3.8h-ldflags.patch
index a6eeabfdf46c..40070d50fe76 100644
--- a/sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch
+++ b/sci-biology/fasta/files/fasta-36.3.8h-ldflags.patch
@@ -1,14 +1,7 @@
- make/Makefile.pcom | 8 ++++----
- make/Makefile.pcom_s | 8 ++++----
- make/Makefile.pcom_t | 8 ++++----
- 3 files changed, 12 insertions(+), 12 deletions(-)
-
-diff --git a/make/Makefile.pcom b/make/Makefile.pcom
-index 9c5f801..33fc001 100644
--- a/make/Makefile.pcom
+++ b/make/Makefile.pcom
-@@ -209,14 +209,14 @@ print_pssm : print_pssm.c getseq.c karlin.c apam.c
- $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c $(LIB_M)
+@@ -216,14 +216,14 @@
+ $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c pssm_asn_subs.c $(LIB_M) $(LIB_DB)
map_db : map_db.c uascii.h ncbl2_head.h
- $(CC) $(CFLAGS) -o $(BIN)/map_db map_db.c
@@ -26,12 +19,10 @@ index 9c5f801..33fc001 100644
lav2svg : lav2plt.o lavplt_svg.o
- $(CC) -DUNIX -o $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm
+ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm
-diff --git a/make/Makefile.pcom_s b/make/Makefile.pcom_s
-index dc53001..8a45044 100644
--- a/make/Makefile.pcom_s
+++ b/make/Makefile.pcom_s
-@@ -143,14 +143,14 @@ print_pssm : print_pssm.c getseq.c karlin.c apam.c
- $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c $(LIB_M)
+@@ -149,14 +149,14 @@
+ $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c pssm_asn_subs.c $(LIB_M) $(LIB_DB)
map_db : map_db.c uascii.h ncbl2_head.h
- $(CC) $(CFLAGS) -o $(BIN)/map_db map_db.c
@@ -49,12 +40,10 @@ index dc53001..8a45044 100644
lav2svg : lav2plt.o lavplt_svg.o
- $(CC) -DUNIX -o $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm
+ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm
-diff --git a/make/Makefile.pcom_t b/make/Makefile.pcom_t
-index 8a71438..5b08a50 100644
--- a/make/Makefile.pcom_t
+++ b/make/Makefile.pcom_t
-@@ -164,14 +164,14 @@ print_pssm : print_pssm.c getseq.c karlin.c apam.c
- $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c $(LIB_M)
+@@ -171,14 +171,14 @@
+ $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c pssm_asn_subs.c $(LIB_M) $(LIB_DB)
map_db : map_db.c uascii.h ncbl2_head.h
- $(CC) $(CFLAGS) -o $(BIN)/map_db map_db.c