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author | V3n3RiX <venerix@koprulu.sector> | 2022-03-20 00:40:44 +0000 |
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committer | V3n3RiX <venerix@koprulu.sector> | 2022-03-20 00:40:44 +0000 |
commit | 4cbcc855382a06088e2f016f62cafdbcb7e40665 (patch) | |
tree | 356496503d52354aa6d9f2d36126302fed5f3a73 /sci-biology/emboss/emboss-6.6.0-r1.ebuild | |
parent | fcc5224904648a8e6eb528d7603154160a20022f (diff) |
gentoo resync : 20.03.2022
Diffstat (limited to 'sci-biology/emboss/emboss-6.6.0-r1.ebuild')
-rw-r--r-- | sci-biology/emboss/emboss-6.6.0-r1.ebuild | 67 |
1 files changed, 0 insertions, 67 deletions
diff --git a/sci-biology/emboss/emboss-6.6.0-r1.ebuild b/sci-biology/emboss/emboss-6.6.0-r1.ebuild deleted file mode 100644 index 766dd6a61b0c..000000000000 --- a/sci-biology/emboss/emboss-6.6.0-r1.ebuild +++ /dev/null @@ -1,67 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -EBO_EAUTORECONF=1 - -inherit emboss-r2 readme.gentoo-r1 - -DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package" -SRC_URI=" - ftp://emboss.open-bio.org/pub/${PN^^}/${P^^}.tar.gz - https://dev.gentoo.org/~soap/distfiles/${P}-patches.tar.xz" -S="${WORKDIR}/${P^^}" - -LICENSE+=" Apache-2.0 GPL-3+ CC-BY-3.0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="minimal" - -RDEPEND=" - !games-action/xbomber - !sys-devel/cons" -PDEPEND=" - !minimal? ( - sci-biology/aaindex - sci-biology/cutg - sci-biology/primer3 - sci-biology/prints - sci-biology/prosite - sci-biology/rebase - )" - -PATCHES=( - "${WORKDIR}"/patches/${P}-fix-build-system.patch - "${WORKDIR}"/patches/${P}-FORTIFY_SOURCE-fix.patch - "${WORKDIR}"/patches/${P}-plplot-declarations.patch - "${WORKDIR}"/patches/${P}-qa-implicit-declarations.patch - "${WORKDIR}"/patches/${P}-C99-bool.patch - "${WORKDIR}"/patches/${P}-Wimplicit-function-declaration.patch -) - -src_install() { - emboss-r2_src_install - - readme.gentoo_create_doc - - # Install env file for setting libplplot and acd files path. - newenvd - 22emboss <<- EOF || die - # ACD files location - EMBOSS_ACDROOT="${EPREFIX}/usr/share/EMBOSS/acd" - EMBOSS_DATA="${EPREFIX}/usr/share/EMBOSS/data" - EOF - - # Remove useless dummy files - find "${ED}"/usr/share/EMBOSS -name dummyfile -delete \ - || die "Failed to remove dummy files" - - # Move the provided codon files to a different directory. This will avoid - # user confusion and file collisions on case-insensitive file systems (see - # bug #115446). This change is documented in "README.gentoo". - mv "${ED}"/usr/share/EMBOSS/data/CODONS{,.orig} \ - || die "Failed to move CODON directory" -} - -pkg_postinst() { - readme.gentoo_print_elog -} |